#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
14YBB|1|DA (rep)Large subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.12015-03-18
24V54|1|DBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-ray diffraction3.32014-07-09
34V54|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-ray diffraction3.32014-07-09
44WWW|1|RALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to CEM-101X-ray diffraction3.12014-12-24
54V7T|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to chloramphenicol.X-ray diffraction3.192014-07-09
64V6C|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.192014-07-09
74V52|1|DBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-ray diffraction3.212014-07-09
84V7S|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to telithromycin.X-ray diffraction3.252014-07-09
94V52|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-ray diffraction3.212014-07-09
102J28|1|BLarge subunit ribosomal RNA23S RIBOSOMAL RNAEscherichia coliBacteriaRF02541MODEL OF E. COLI SRP BOUND TO 70S RNCSElectron microscopy9.52006-11-08
114V4Q|1|DBLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-ray diffraction3.462014-07-09
124V7U|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to erythromycin.X-ray diffraction3.12014-07-09
134V4Q|1|BBLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-ray diffraction3.462014-07-09
144V50|1|DBLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-ray diffraction3.222014-07-09
154V53|1|DBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-ray diffraction3.542014-07-09
163J5L|1|ALarge subunit ribosomal RNA23S ribsomal RNA, 5'-R(*CP*CP*A)-3', 5'-R(*CP*(MA6))-3'Escherichia coliBacteriaRF02541Structure of the E. coli 50S subunit with ErmBL nascent chainElectron microscopy6.62014-03-26
175GAE|1|ALarge subunit ribosomal RNA23S rRNA, tRNA CCA end (5'-R(P*CP*CP*A)-3')Escherichia coliBacteriaRF02541RNC in complex with a translocating SecYEGElectron microscopy3.332016-01-27
184V9P|1|EALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
194V50|1|BBLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-ray diffraction3.222014-07-09
204V85|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.X-ray diffraction3.22014-07-09
214V53|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-ray diffraction3.542014-07-09
224V4H|1|DBLarge subunit ribosomal RNA23S RIBOSOMAL RNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-ray diffraction3.462014-07-09
234V9O|1|EALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
244V4H|1|BBLarge subunit ribosomal RNA23S RIBOSOMAL RNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-ray diffraction3.462014-07-09
254V55|1|DBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-ray diffraction42014-07-09
264V57|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-ray diffraction3.52014-07-09
274V7V|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to clindamycin.X-ray diffraction3.292014-07-09
285GAG|1|ALarge subunit ribosomal RNA23S rRNA, tRNA CCAendEscherichia coliBacteriaRF02541RNC in complex with SRP-SR in the closed stateElectron microscopy3.82016-01-27
294V64|1|BBLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-ray diffraction3.52014-07-09
304V57|1|DBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-ray diffraction3.52014-07-09
314V64|1|DBLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-ray diffraction3.52014-07-09
324V5Y|1|DBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF).X-ray diffraction4.452014-07-09
334V5Y|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF).X-ray diffraction4.452014-07-09
344V55|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-ray diffraction42014-07-09
354V89|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)X-ray diffraction3.72014-07-09
364V6D|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.812014-07-09
374V9D|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction32014-07-09
385GAF|1|ALarge subunit ribosomal RNA23S ribosomal RNA, tRNA CCAendEscherichia coliBacteriaRF02541RNC in complex with SRPElectron microscopy4.32016-02-03
395GAD|1|ALarge subunit ribosomal RNA23S rRNA, tRNA CCAendEscherichia coliBacteriaRF02541RNC-SRP-SR complex early stateElectron microscopy3.72016-01-27
405GAH|1|ALarge subunit ribosomal RNA23S rRNA, tRNA CCAendEscherichia coliBacteriaRF02541RNC in complex with SRP with detached NG domainElectron microscopy3.82016-01-27
414U27|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-ray diffraction2.82014-07-30
424U25|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-ray diffraction2.92014-07-30
435IQR|1|1Large subunit ribosomal RNALSU rRNAEscherichia coliBacteriaRF02541Structure of RelA bound to the 70S ribosomeElectron microscopy32016-05-04
444U24|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to dalfopristin.X-ray diffraction2.92014-07-30
454V6E|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.712014-07-09
464V9P|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
474V9P|1|AALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
484V9O|1|AALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
494WF1|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to negamycin.X-ray diffraction3.092014-11-05
504U1U|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to quinupristin.X-ray diffraction2.952014-07-30
513J7Z|1|ALarge subunit ribosomal RNA23S rRNA, P-tRNA CCA-endEscherichia coliBacteriaRF02541Structure of the E. coli 50S subunit with ErmCL nascent chainElectron microscopy3.92014-10-22
524V9O|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
534V56|1|DBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-ray diffraction3.932014-07-09
544UY8|1|ALarge subunit ribosomal RNARRNA-23S RIBOSOMAL RNAEscherichia coliBacteriaRF02541Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosomeElectron microscopy3.82014-10-29
554U1V|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to linopristin.X-ray diffraction32014-07-30
564V56|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-ray diffraction3.932014-07-09
574V6T|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loadingElectron microscopy8.32014-07-09
584V7B|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Visualization of two tRNAs trapped in transit during EF-G-mediated translocationElectron microscopy6.82014-07-09
594V9P|1|GALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
604U20|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to flopristin.X-ray diffraction2.92014-07-30
614U26|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-ray diffraction2.82014-07-30
624YBB|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.12015-03-18
634WOI|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF025414,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-ray diffraction32015-08-05
643J9Y|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosomeElectron microscopy3.92015-04-15
655AFI|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF025412.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMElectron microscopy2.92015-03-11
664V9D|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction32014-07-09
675AKA|1|BLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541EM structure of ribosome-SRP-FtsY complex in closed stateElectron microscopy5.72015-03-25
684U1U|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to quinupristin.X-ray diffraction2.952014-07-30
694V6D|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.812014-07-09
704WOI|1|CALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF025414,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-ray diffraction32015-08-05
714U20|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to flopristin.X-ray diffraction2.92014-07-30
724V6C|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.192014-07-09
734V9C|1|DALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Allosteric control of the ribosome by small-molecule antibioticsX-ray diffraction3.32014-07-09
744V5H|1|BBLarge subunit ribosomal RNA23S RIBOSOMAL RNAEscherichia coliBacteriaRF02541E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.Electron microscopy5.82014-07-09
754U1V|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to linopristin.X-ray diffraction32014-07-30
764V6V|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Tetracycline resistance protein Tet(O) bound to the ribosomeElectron microscopy9.82014-07-09
774V69|1|BBLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Ternary complex-bound E.coli 70S ribosome.Electron microscopy6.72014-07-09
783JCN|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association: Initiation Complex IElectron microscopy4.62016-03-09
794U25|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-ray diffraction2.92014-07-30
804V6E|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.712014-07-09
814V9O|1|GALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
824V6M|1|B8Large subunit ribosomal RNA23S RIBOSOMAL RNAEscherichia coliBacteriaRF02541Structure of the ribosome-SecYE complex in the membrane environmentElectron microscopy7.12014-07-09
834U27|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-ray diffraction2.82014-07-30
844V7S|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to telithromycin.X-ray diffraction3.252014-07-09
854V7T|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to chloramphenicol.X-ray diffraction3.192014-07-09
864V75|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)Electron microscopy122014-07-09
874V7V|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to clindamycin.X-ray diffraction3.292014-07-09
883JCE|1|ALarge subunit ribosomal RNA23 ribosomal RNAEscherichia coliBacteriaRF02541Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)Electron microscopy3.22016-01-13
894V6Y|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)Electron microscopy122014-07-09
904WF1|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to negamycin.X-ray diffraction3.092014-11-05
913J9Z|1|LALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GElectron microscopy3.62015-07-01
923JCJ|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit associationElectron microscopy3.72016-03-09
934V7A|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-fMetVal-tRNAVal post-translocation complex (post4)Electron microscopy92014-07-09
944V6Z|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)Electron microscopy122014-07-09
954V72|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)Electron microscopy132014-07-09
964V76|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)Electron microscopy172014-07-09
974CSU|1|BLarge subunit ribosomal RNA23S RRNAEscherichia coliBacteriaRF02541Cryo-EM structures of the 50S ribosome subunit bound with ObgEElectron microscopy5.52014-06-04
984V73|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a)Electron microscopy152014-07-09
994WWW|1|YALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to CEM-101X-ray diffraction3.12014-12-24
1004U24|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to dalfopristin.X-ray diffraction2.92014-07-30
1014V70|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)Electron microscopy172014-07-09
1024V7I|1|A8Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Ribosome-SecY complex.Electron microscopy9.62014-07-09
1034U26|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-ray diffraction2.82014-07-30
1044V9C|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Allosteric control of the ribosome by small-molecule antibioticsX-ray diffraction3.32014-07-09
1054V74|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254170S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)Electron microscopy172014-07-09
1064V77|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)Electron microscopy172014-07-09
1074V78|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)Electron microscopy202014-07-09
1084V6K|1|ABLarge subunit ribosomal RNAribosomal RNA 23SEscherichia coliBacteriaRF02541Structural insights into cognate vs. near-cognate discrimination during decoding.Electron microscopy8.252014-07-09
1094V71|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2)Electron microscopy202014-07-09
1104V79|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)Electron microscopy152014-07-09
1113BBX|1|BLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complexElectron microscopy102008-10-21
1123JBV|1|bLarge subunit ribosomal RNARNA (2903-MER)Escherichia coliBacteriaRF02541Mechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsElectron microscopy3.322016-01-27
1134V7U|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to erythromycin.X-ray diffraction3.12014-07-09
1144V6L|1|BBLarge subunit ribosomal RNA50S ribosomal RNA 23SEscherichia coliBacteriaRF02541Structural insights into cognate vs. near-cognate discrimination during decoding.Electron microscopy13.22014-07-09
1153JA1|1|LALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GElectron microscopy3.62015-07-01
1163JCD|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)Electron microscopy3.72016-01-13
1174V6N|1|ABLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)Electron microscopy12.12014-07-09
1184V7D|1|AALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)Electron microscopy7.62014-07-09
1194V6O|1|BBLarge subunit ribosomal RNA23S ribomosomal RNAEscherichia coliBacteriaRF02541Structural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes)Electron microscopy14.72014-07-09
1203J8G|1|BLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunitElectron microscopy52014-11-26
1214V6R|1|BBLarge subunit ribosomal RNA23S ribomosomal RNAEscherichia coliBacteriaRF02541Structural characterization of mRNA-tRNA translocation intermediates (class 6 of the six classes)Electron microscopy11.52014-07-09
1224V6Q|1|BBLarge subunit ribosomal RNA23S ribomosomal RNAEscherichia coliBacteriaRF02541Structural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes)Electron microscopy11.52014-07-09
1234V6S|1|ABLarge subunit ribosomal RNA23S ribomosomal RNAEscherichia coliBacteriaRF02541Structural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes)Electron microscopy13.12014-07-09
1244V6P|1|BBLarge subunit ribosomal RNA23S ribomosomal RNAEscherichia coliBacteriaRF02541Structural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes)Electron microscopy13.52014-07-09
1254V7C|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure)Electron microscopy7.62014-07-09
1263JBU|1|bLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Mechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsElectron microscopy3.642016-01-27
1274V5B|1|ABLarge subunit ribosomal RNA23S RIBOSOMAL RNAEscherichia coliBacteriaRF02541Structure of PDF binding helix in complex with the ribosomeX-ray diffraction3.742014-07-09
1284V5B|1|CBLarge subunit ribosomal RNA23S RIBOSOMAL RNAEscherichia coliBacteriaRF02541Structure of PDF binding helix in complex with the ribosomeX-ray diffraction3.742014-07-09
1295ADY|1|BLarge subunit ribosomal RNA23S RRNAEscherichia coliBacteriaRF02541Cryo-EM structures of the 50S ribosome subunit bound with HflXElectron microscopy4.52015-10-14
1301C2W|1|BLarge subunit ribosomal RNA23S RIBOSOMAL RNAEscherichia coliBacteriaRF0254123S RRNA STRUCTURE FITTED TO A CRYO-ELECTRON MICROSCOPIC MAP AT 7.5 ANGSTROMS RESOLUTIONElectron microscopy7.52000-04-10
1314V4V|1|B0Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056Electron microscopy152014-07-09
1324V4W|1|B0Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143Electron microscopy152014-07-09
1334V66|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the E. coli ribosome and the tRNAs in Post-accommodation stateElectron microscopy92014-07-09
1344V65|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the E. coli ribosome in the Pre-accommodation stateElectron microscopy92014-07-09
1353DG0|1|BLarge subunit ribosomal RNA23S Ribosomal RNA from E. coliEscherichia coliBacteriaRF02541Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of EF-G-bound translocation complexElectron microscopy10.82009-02-03
1363DG4|1|BLarge subunit ribosomal RNA23S RibosomaL RNA from E. coliEscherichia coliBacteriaRF02541Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of RF1-bound termination complexElectron microscopy12.82009-02-03
1372RDO|1|BLarge subunit ribosomal RNA23S RIBOSOMAL RNAEscherichia coliBacteriaRF0254150S subunit with EF-G(GDPNP) and RRF boundElectron microscopy9.12008-03-04
1383DG2|1|BLarge subunit ribosomal RNA23S Ribosomal RNA from E. coliEscherichia coliBacteriaRF02541Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of a pretranslocation complexElectron microscopy102009-02-03
1393DG5|1|BLarge subunit ribosomal RNA23S Ribosomal RNA from E. coliEscherichia coliBacteriaRF02541Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of RF3-bound termination complexElectron microscopy15.52009-02-03
1404V47|1|A0Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the EF-G.GTP state of E. coli 70S ribosomeElectron microscopy12.32014-07-09
1414V48|1|A0Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the initiation-like state of E. coli 70S ribosomeElectron microscopy11.52014-07-09

Release history

Release2.742.752.762.772.782.792.802.812.82
Date2016-05-062016-05-132016-05-202016-05-272016-06-032016-06-102016-06-172016-06-242016-07-01

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_83717.14NR_2.5_83717.152.83(2) 4YBB|1|DA, 4YBB|1|CA(139) 4V6C|1|BA, 4V54|1|BB, 4V53|1|DB, 4V53|1|BB, 4V52|1|DB, 4V52|1|BB, 4V50|1|DB, 4V50|1|BB, 4V4W|1|B0, 4V4V|1|B0, 4V4Q|1|DB, 4V4Q|1|BB, 4V4H|1|DB, 4V4H|1|BB, 4V48|1|A0, 4V47|1|A0, 4V54|1|DB, 4V55|1|BB, 4V69|1|BB, 4V66|1|BB, 4V65|1|BB, 4V64|1|DB, 4V64|1|BB, 4V5Y|1|DB, 4V5Y|1|BB, 4V5H|1|BB, 4V5B|1|CB, 4V5B|1|AB, 4V57|1|DB, 4V57|1|BB, 4V56|1|DB, 4V56|1|BB, 4V55|1|DB, 4UY8|1|A, 4U27|1|DA, 4U27|1|BA, 3JBV|1|b, 3JBU|1|b, 3JA1|1|LA, 3J9Z|1|LA, 3J9Y|1|A, 3J8G|1|B, 3J7Z|1|A, 3J5L|1|A, 3DG5|1|B, 3DG4|1|B, 3DG2|1|B, 3DG0|1|B, 3BBX|1|B, 2RDO|1|B, 2J28|1|B, 3JCD|1|A, 3JCE|1|A, 4U26|1|DA, 4U26|1|BA, 4U25|1|DA, 4U25|1|BA, 4U24|1|DA, 4U24|1|BA, 4U20|1|DA, 4U20|1|BA, 4U1V|1|DA, 4U1V|1|BA, 4U1U|1|DA, 4U1U|1|BA, 4CSU|1|B, 3JCN|1|A, 3JCJ|1|A, 1C2W|1|B, 4V6C|1|DA, 5IQR|1|1, 4V9P|1|AA, 4V9O|1|GA, 4V9O|1|EA, 4V9O|1|CA, 4V9O|1|AA, 4V9D|1|DA, 4V9D|1|CA, 4V9C|1|DA, 4V9C|1|BA, 4V89|1|BA, 4V85|1|BA, 4V7V|1|DA, 4V7V|1|BA, 4V7U|1|DA, 4V7U|1|BA, 4V9P|1|CA, 4V9P|1|EA, 5GAH|1|A, 5GAG|1|A, 5GAF|1|A, 5GAE|1|A, 5GAD|1|A, 5AKA|1|B, 5AFI|1|A, 5ADY|1|(0)
NR_all_83717.14NR_20.0_83717.152.83(140) 4V77|1|BA, 4V76|1|BA, 4V75|1|BA, 4V78|1|BA, 4V7A|1|BA, 4V79|1|BA, 4V73|1|BA, 4V72|1|BA, 4V71|1|BA, 4V74|1|BA, 4V7T|1|DA, 4V7S|1|DA, 4V7S|1|BA, 4V7I|1|A8, 4V7T|1|BA, 4V7C|1|BA, 4V7B|1|BA, 4V7D|1|AA, 4V6P|1|BB, 4V6N|1|AB, 4V6M|1|B8, 4V6L|1|BB, 4V6O|1|BB, 4V6E|1|BA, 4V6D|1|DA, 4V6E|1|DA, 4V6K|1|AB, 4V6Z|1|BA, 4V6Y|1|BA, 4V6V|1|BA, 4V70|1|BA, 4V6R|1|BB, 4V6Q|1|BB, 4V6S|1|AB, 4V6T|1|BA, 5ADY|1|B, 4WWW|1|YA, 4WWW|1|RA, 4YBB|1|CA, 4YBB|1|DA, 4WOI|1|CA, 4WF1|1|DA, 4WF1|1|BA, 4V9P|1|GA, 4WOI|1|BA, 5IQR|1|1, 5GAG|1|A, 5GAF|1|A, 5GAE|1|A, 5GAH|1|A, 5AKA|1|B, 5AFI|1|A, 5GAD|1|A, 4V9D|1|CA, 4V9C|1|BA, 4V89|1|BA, 4V85|1|BA, 4V9C|1|DA, 4V7U|1|DA, 4V7U|1|BA, 4V7V|1|BA, 4V7V|1|DA, 4V9P|1|CA, 4V9P|1|AA, 4V9O|1|GA, 4V9P|1|EA, 4V9O|1|AA, 4V9D|1|DA, 4V9O|1|CA, 4V9O|1|EA, 4U24|1|BA, 4U1V|1|DA, 4U1V|1|BA, 4U20|1|BA, 4U20|1|DA, 4U1U|1|DA, 4CSU|1|B, 3JCN|1|A, 3JCJ|1|A, 4U1U|1|BA, 4UY8|1|A, 4U27|1|BA, 4U26|1|DA, 4U26|1|BA, 4U27|1|DA, 4U25|1|BA, 4U24|1|DA, 4U25|1|DA, 3J7Z|1|A, 3DG5|1|B, 3DG4|1|B, 3DG2|1|B, 3J5L|1|A, 2RDO|1|B, 2J28|1|B, (1) 1C2W|1|B(8) 5J88|1|CA, 5J88|1|DA, 5J8A|1|CA, 5J8A|1|DA, 5J91|1|CA, 5J91|1|DA, 5JC9|1|CA, 5JC9|1|DA
NR_all_83717.14NR_3.0_83717.152.83(30) 4U1V|1|BA, 4U1U|1|DA, 4U1V|1|DA, 4U1U|1|BA, 4U25|1|DA, 4U25|1|BA, 4U26|1|BA, 4U24|1|DA, 4U26|1|DA, 4U27|1|BA, 4U20|1|BA, 4U20|1|DA, 4U24|1|BA, 4YBB|1|DA, 4YBB|1|CA, 4WOI|1|CA, 5IQR|1|1, 5AFI|1|A, 4V9P|1|EA, 4V9P|1|GA, 4V9P|1|CA, 4WOI|1|BA, 4V9O|1|EA, 4V9O|1|GA, 4V9O|1|CA, 4V9P|1|AA, 4U27|1|DA, 4V9D|1|CA, 4V9O|1|AA, 4V9D|1|DA(111) 3DG2|1|B, 3DG0|1|B, 3BBX|1|B, 2RDO|1|B, 2J28|1|B, 1C2W|1|B, 5GAH|1|A, 5GAG|1|A, 3DG4|1|B, 3DG5|1|B, 3J5L|1|A, 3JCD|1|A, 3JBV|1|b, 3JBU|1|b, 3JA1|1|LA, 3J9Z|1|LA, 3J9Y|1|A, 3J8G|1|B, 3J7Z|1|A, 5GAF|1|A, 5GAE|1|A, 5GAD|1|A, 4V7V|1|DA, 4V7V|1|BA, 4V7U|1|DA, 4V7U|1|BA, 4V7T|1|DA, 4V7T|1|BA, 4V7S|1|DA, 4V7S|1|BA, 4V85|1|BA, 4V89|1|BA, 5AKA|1|B, 5ADY|1|B, 4WWW|1|YA, 4WWW|1|RA, 4WF1|1|DA, 4WF1|1|BA, 4V9C|1|DA, 4V9C|1|BA, 4V7I|1|A8, 3JCE|1|A, 4V6E|1|BA, 4V5Y|1|BB, 4V5H|1|BB, 4V5B|1|CB, 4V5B|1|AB, 4V57|1|DB, 4V57|1|BB, 4V56|1|DB, 4V56|1|BB, 4V5Y|1|DB, 4V64|1|BB, 4V6D|1|DA, 4V6D|1|BA, 4V6C|1|DA, 4V6C|1|BA, 4V69|1|BB, 4V66|1|BB, 4V65|1|BB, 4V64|1|DB, 4V55|1|DB, 4V55|1|BB, 4V54|1|DB, 4V4Q|1|BB, 4V4H|1|DB, 4V4H|1|BB, 4V48|1|A0, 4V47|1|A0, 4UY8|1|A, 4CSU|1|B, 3JCN|1|A, 4V4Q|1|DB, 4V4V|1|B0, 4V54|1|BB, 4V53|1|DB, 4V53|1|BB, 4V52|1|DB, 4V52|1|BB, 4V50|1|DB, 4V50|1|BB, 4V4W|1|B0, 3JCJ|1|A, 4V7D|1|AA, 4V7C|1|BA, 4V71|1|BA, 4V70|1|BA, 4V6Z|1|BA, 4V6Y|1|BA, 4V6V|1|BA, 4V6T|1|BA, 4V6S|1|AB, 4V6R|1|BB, 4V72|1|BA, 4V73|1|BA, 4V7B|1(2) 5J91|1|CA, 5J91|1|DA
NR_all_83717.14NR_3.5_83717.152.83(64) 4U1U|1|BA, 4U1U|1|DA, 3JBV|1|b, 3JCE|1|A, 4U24|1|DA, 4U24|1|BA, 4U25|1|BA, 4U20|1|DA, 4U1V|1|DA, 4U20|1|BA, 4U1V|1|BA, 4U26|1|BA, 4U26|1|DA, 4U25|1|DA, 4V7S|1|BA, 4V7S|1|DA, 4V6C|1|DA, 4V6C|1|BA, 4V64|1|DB, 4V64|1|BB, 4V57|1|DB, 4V57|1|BB, 4V54|1|DB, 4V54|1|BB, 4V52|1|DB, 4V52|1|BB, 4V50|1|DB, 4V50|1|BB, 4V4Q|1|DB, 4V4Q|1|BB, 4V4H|1|DB, 4U27|1|DA, 4V4H|1|BB, 4U27|1|BA, 4YBB|1|CA, 4YBB|1|DA, 4WWW|1|RA, 4WWW|1|YA, 5GAE|1|A, 5IQR|1|1, 5AFI|1|A, 4V7U|1|BA, 4V7T|1|DA, 4V7U|1|DA, 4V7T|1|BA, 4WOI|1|CA, 4WOI|1|BA, 4WF1|1|DA, 4V9P|1|GA, 4WF1|1|BA, 4V9P|1|EA, 4V9P|1|CA, 4V9P|1|AA, 4V9O|1|EA, 4V9O|1|GA, 4V9O|1|CA, 4V9O|1|AA, 4V9D|1|DA, 4V9C|1|DA, 4V9D|1|CA, 4V9C|1|BA, 4V85|1|BA, 4V7V|1|DA, 4V7V|1|BA(77) 4V69|1|BB, 4V6Z|1|BA, 4V70|1|BA, 4V71|1|BA, 4V72|1|BA, 4V73|1|BA, 4V74|1|BA, 4V75|1|BA, 4V76|1|BA, 4V77|1|BA, 4V78|1|BA, 4V79|1|BA, 4V7A|1|BA, 4V7B|1|BA, 4V7C|1|BA, 4V6Y|1|BA, 4V6V|1|BA, 4V6D|1|BA, 4V6D|1|DA, 4V6E|1|BA, 4V6E|1|DA, 4V6K|1|AB, 4V6L|1|BB, 4V6M|1|B8, 4V6N|1|AB, 4V6O|1|BB, 4V6P|1|BB, 4V6Q|1|BB, 4V6R|1|BB, 4V6S|1|AB, 4V6T|1|BA, 4V7D|1|AA, 4V7I|1|A8, 3J7Z|1|A, 3J8G|1|B, 3J9Y|1|A, 3J9Z|1|LA, 3JA1|1|LA, 3JBU|1|b, 3JCD|1|A, 3JCJ|1|A, 3JCN|1|A, 4CSU|1|B, 4UY8|1|A, 4V47|1|A0, 4V48|1|A0, 4V4V|1|B0, 3J5L|1|A, 3DG5|1|B, 4V89|1|BA, 5ADY|1|B, 5AKA|1|B, 5GAD|1|A, 5GAF|1|A, 5GAG|1|A, 5GAH|1|A, 1C2W|1|B, 2J28|1|B, 2RDO|1|B, 3BBX|1|B, 3DG0|1|B, 3DG2|1|B, 3DG4|1|B, 4V4W|1|B0, 4V66|1|BB, 4V53|1|BB, 4V53|1|DB, 4V55|1|BB, 4V55|1|DB, 4V56|1|BB, 4V56|1|DB, 4V5B|1|AB, 4V5B|1|CB, 4V5H|1|BB, 4V5Y|1|BB, 4V5Y|1|DB, 4V65|1|BB(8) 5J91|1|CA, 5J91|1|DA, 5J8A|1|DA, 5JC9|1|CA, 5J88|1|DA, 5J88|1|CA, 5J8A|1|CA, 5JC9|1|DA
NR_all_83717.14NR_4.0_83717.152.83(88) 4V9C|1|BA, 4V89|1|BA, 4V9C|1|DA, 4V7V|1|DA, 4V85|1|BA, 4V7V|1|BA, 4V9O|1|AA, 4V9O|1|CA, 4V9O|1|EA, 4V9D|1|CA, 4V9D|1|DA, 5GAH|1|A, 5GAG|1|A, 5IQR|1|1, 5GAD|1|A, 5GAE|1|A, 4WOI|1|BA, 4WOI|1|CA, 4WF1|1|DA, 4WWW|1|RA, 4WF1|1|BA, 4V9P|1|GA, 4YBB|1|DA, 4YBB|1|CA, 5AFI|1|A, 4WWW|1|YA, 4V9P|1|CA, 4V9P|1|EA, 4V9O|1|GA, 4V9P|1|AA, 4V4Q|1|DB, 4V50|1|BB, 4V50|1|DB, 4V4H|1|DB, 4V4H|1|BB, 4V4Q|1|BB, 4V7U|1|DA, 4V7U|1|BA, 4V7T|1|BA, 4V7T|1|DA, 4V7S|1|DA, 4V7S|1|BA, 4V6E|1|DA, 4V6D|1|DA, 4V6E|1|BA, 4V6C|1|DA, 4V6C|1|BA, 4V6D|1|BA, 4V64|1|BB, 4V64|1|DB, 4V5B|1|AB, 4V57|1|DB, 4V5B|1|CB, 4V57|1|BB, 4V56|1|DB, 4V55|1|DB, 4V56|1|BB, 4V55|1|BB, 4V54|1|DB, 4V54|1|BB, 4V53|1|BB, 4V53|1|DB, 4V52|1|DB, 4V52|1|BB, 3J7Z|1|A, 4U25|1|DA, 4U25|1|BA, 4U26|1|BA, 4U24|1|BA, 4U24|1|DA, 4U20|1|DA, 4U20|1|BA, 4U1V|1|DA, 4U1U|1|DA, 4U1V|1|BA, 3JCJ|1|A, 3JCE|1|A, 4U1U|1|BA, 3JBV|1|b, 3JCD|1|A, 3JA1|1|LA, 3J9Z|1|LA, 3JBU|1|b, 3J9Y|1|A, 4U27|1|DA, 4UY8|1|A, 4U26|1|DA, 4U27|1|BA(53) 3DG0|1|B, 4V69|1|BB, 4V6K|1|AB, 4V6L|1|BB, 4V6M|1|B8, 4V6N|1|AB, 4V6O|1|BB, 4V6P|1|BB, 4V6Q|1|BB, 4V6R|1|BB, 4V6S|1|AB, 4V6T|1|BA, 4V6V|1|BA, 4V6Y|1|BA, 4V6Z|1|BA, 4V66|1|BB, 4V65|1|BB, 3DG2|1|B, 3DG4|1|B, 3DG5|1|B, 3J5L|1|A, 3J8G|1|B, 3JCN|1|A, 4CSU|1|B, 4V47|1|A0, 4V48|1|A0, 4V4V|1|B0, 4V4W|1|B0, 4V5H|1|BB, 4V5Y|1|BB, 4V5Y|1|DB, 4V70|1|BA, 4V71|1|BA, 1C2W|1|B, 2J28|1|B, 2RDO|1|B, 3BBX|1|B, 5GAF|1|A, 5AKA|1|B, 4V72|1|BA, 4V73|1|BA, 4V74|1|BA, 4V75|1|BA, 4V76|1|BA, 4V77|1|BA, 4V78|1|BA, 4V79|1|BA, 4V7A|1|BA, 4V7B|1|BA, 4V7C|1|BA, 4V7D|1|AA, 4V7I|1|A8, 5ADY|1|B(8) 5J88|1|CA, 5J88|1|DA, 5JC9|1|CA, 5JC9|1|DA, 5J8A|1|CA, 5J8A|1|DA, 5J91|1|CA, 5J91|1|DA
NR_all_83717.14NR_all_83717.152.83(141) 4V7B|1|BA, 4V79|1|BA, 4V78|1|BA, 4V77|1|BA, 4V7A|1|BA, 4V74|1|BA, 4V73|1|BA, 4V75|1|BA, 4V76|1|BA, 4V72|1|BA, 4V7U|1|BA, 4V7T|1|BA, 4V7S|1|DA, 4V7S|1|BA, 4V7T|1|DA, 4V7D|1|AA, 4V7C|1|BA, 4V7I|1|A8, 4V6R|1|BB, 4V6O|1|BB, 4V6N|1|AB, 4V6P|1|BB, 4V6Q|1|BB, 4V6M|1|B8, 4V6K|1|AB, 4V6E|1|DA, 4V6E|1|BA, 4V6L|1|BB, 4V70|1|BA, 4V6Z|1|BA, 4V6Y|1|BA, 4V71|1|BA, 4V6T|1|BA, 4V6S|1|AB, 4V6V|1|BA, 5ADY|1|B, 4YBB|1|CA, 4WWW|1|YA, 4WWW|1|RA, 4YBB|1|DA, 4WF1|1|DA, 4WF1|1|BA, 4WOI|1|BA, 4WOI|1|CA, 5IQR|1|1, 5GAG|1|A, 5GAF|1|A, 5GAE|1|A, 5GAH|1|A, 5AKA|1|B, 5AFI|1|A, 5GAD|1|A, 4V9P|1|GA, 4V9D|1|DA, 4V9C|1|DA, 4V9C|1|BA, 4V89|1|BA, 4V9D|1|CA, 4V7V|1|BA, 4V7U|1|DA, 4V7V|1|DA, 4V85|1|BA, 4V9P|1|CA, 4V9P|1|AA, 4V9O|1|GA, 4V9P|1|EA, 4V9O|1|CA, 4V9O|1|AA, 4V9O|1|EA, 4U25|1|BA, 4U24|1|BA, 4U20|1|DA, 4U20|1|BA, 4U24|1|DA, 4U1V|1|BA, 4U1U|1|DA, 4U1U|1|BA, 4U1V|1|DA, 4V4H|1|BB, 4V47|1|A0, 4UY8|1|A, 4U27|1|DA, 4V48|1|A0, 4U26|1|BA, 4U25|1|DA, 4U26|1|DA, 4U27|1|BA, 3J9Z|1|LA, 3J8G|1|B, 3J7Z|1|A, 3J5L|1|A, 3J9Y|1|A, 3DG4|1|B, 3DG2|1|B, 3DG0|1(0) (8) 5J8A|1|CA, 5J88|1|CA, 5JC9|1|DA, 5JC9|1|CA, 5J91|1|DA, 5J91|1|CA, 5J8A|1|DA, 5J88|1|DA

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
11C2W|1|B23S RRNA STRUCTURE FITTED TO A CRYO-ELECTRON MICROSCOPIC MAP AT 7.5 ANGSTROMS RESOLUTIONELECTRON MICROSCOPY7.52891
24V79|1|BAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)ELECTRON MICROSCOPY152903
34V71|1|BAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2)ELECTRON MICROSCOPY202903
44V7A|1|BAE. coli 70S-fMetVal-tRNAVal post-translocation complex (post4)ELECTRON MICROSCOPY92903
54V6Y|1|BAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)ELECTRON MICROSCOPY122903
64V6Z|1|BAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)ELECTRON MICROSCOPY122903
74V78|1|BAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)ELECTRON MICROSCOPY202903
84V76|1|BAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)ELECTRON MICROSCOPY172903
94V77|1|BAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)ELECTRON MICROSCOPY172903
104CSU|1|BCryo-EM structures of the 50S ribosome subunit bound with ObgEELECTRON MICROSCOPY5.52903
114V6L|1|BBStructural insights into cognate vs. near-cognate discrimination during decoding.ELECTRON MICROSCOPY13.22880
124V6K|1|ABStructural insights into cognate vs. near-cognate discrimination during decoding.ELECTRON MICROSCOPY8.252880
134V7I|1|A8Ribosome-SecY complex.ELECTRON MICROSCOPY9.62903
143JBU|1|bMechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsELECTRON MICROSCOPY3.642903
155AKA|1|BEM structure of ribosome-SRP-FtsY complex in closed stateELECTRON MICROSCOPY5.72841
165GAE|1|ARNC in complex with a translocating SecYEGELECTRON MICROSCOPY3.332884
175ADY|1|BCryo-EM structures of the 50S ribosome subunit bound with HflXELECTRON MICROSCOPY4.52903
182J28|1|BMODEL OF E. COLI SRP BOUND TO 70S RNCSELECTRON MICROSCOPY9.52841
194V4Q|1|DBCrystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.462841
204V4H|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.462841
214V54|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.32841
224V53|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-RAY DIFFRACTION3.542841
234V55|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-RAY DIFFRACTION42841
244V5Y|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF).X-RAY DIFFRACTION4.452841
254V52|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.212841
264V64|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.52841
274V57|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.52841
284V56|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-RAY DIFFRACTION3.932841
294V50|1|DBCrystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.222841
304V5B|1|CBStructure of PDF binding helix in complex with the ribosomeX-RAY DIFFRACTION3.742841
314V6D|1|DACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.812841
324V6E|1|DACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.712841
334V6C|1|DACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.192841
344V7T|1|DACrystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.192841
354V7V|1|DACrystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.292841
364V7S|1|DACrystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.252841
374WWW|1|YACrystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.12841
384V7U|1|DACrystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.12841
394YBB|1|CAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.12876
404U24|1|DACrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.92897
414U26|1|DACrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.82897
424U25|1|DACrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.92897
434U27|1|DACrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.82897
444WF1|1|DACrystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.092897
454U1V|1|DACrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION32897
464U20|1|DACrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.92897
474U1U|1|DACrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.952897
484V9D|1|DAStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION32896
494V9C|1|BAAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.32897
504WOI|1|CA4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION32897
514V7V|1|BACrystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.292854
523J5L|1|AStructure of the E. coli 50S subunit with ErmBL nascent chainELECTRON MICROSCOPY6.62853
534V7U|1|BACrystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.12854
544V6C|1|BACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.192854
554V7T|1|BACrystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.192854
564V7S|1|BACrystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.252854
574WWW|1|RACrystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.12854
584V6D|1|BACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.812854
594V6E|1|BACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.712854
604YBB|1|DAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.12883
614V89|1|BACrystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)X-RAY DIFFRACTION3.72853
624V85|1|BACrystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.X-RAY DIFFRACTION3.22853
633JCJ|1|AStructures of ribosome-bound initiation factor 2 reveal the mechanism of subunit associationELECTRON MICROSCOPY3.72854
644V9P|1|CAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
654V9O|1|CAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
664V9O|1|AAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
674UY8|1|AMolecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosomeELECTRON MICROSCOPY3.82854
683J7Z|1|AStructure of the E. coli 50S subunit with ErmCL nascent chainELECTRON MICROSCOPY3.92854
694V9P|1|AAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
704V9P|1|GAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
714V9O|1|GAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
724V9O|1|EAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
734V9P|1|EAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
744V50|1|BBCrystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.222841
754V56|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-RAY DIFFRACTION3.932841
764V57|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.52841
774V64|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.52841
784V53|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-RAY DIFFRACTION3.542841
794V55|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-RAY DIFFRACTION42841
804V5Y|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF).X-RAY DIFFRACTION4.452841
814V52|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.212841
824V4H|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.462841
834V4Q|1|BBCrystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.462841
844V54|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.32841
854V5B|1|ABStructure of PDF binding helix in complex with the ribosomeX-RAY DIFFRACTION3.742841
864V5H|1|BBE.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.ELECTRON MICROSCOPY5.82903
874V6M|1|B8Structure of the ribosome-SecYE complex in the membrane environmentELECTRON MICROSCOPY7.12904
885GAG|1|ARNC in complex with SRP-SR in the closed stateELECTRON MICROSCOPY3.82883
895GAD|1|ARNC-SRP-SR complex early stateELECTRON MICROSCOPY3.72883
905GAF|1|ARNC in complex with SRPELECTRON MICROSCOPY4.32883
915GAH|1|ARNC in complex with SRP with detached NG domainELECTRON MICROSCOPY3.82883
924V7B|1|BAVisualization of two tRNAs trapped in transit during EF-G-mediated translocationELECTRON MICROSCOPY6.82854
935IQR|1|1Structure of RelA bound to the 70S ribosomeELECTRON MICROSCOPY32882
943J9Y|1|ACryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosomeELECTRON MICROSCOPY3.92876
955AFI|1|A2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.92876
963JCE|1|AStructure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)ELECTRON MICROSCOPY3.22903
973JCD|1|AStructure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)ELECTRON MICROSCOPY3.72903
984V69|1|BBTernary complex-bound E.coli 70S ribosome.ELECTRON MICROSCOPY6.72903
993J9Z|1|LAActivation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GELECTRON MICROSCOPY3.62904
1004V6V|1|BATetracycline resistance protein Tet(O) bound to the ribosomeELECTRON MICROSCOPY9.82881
1014V6N|1|ABStructural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)ELECTRON MICROSCOPY12.12880
1024V6S|1|ABStructural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes)ELECTRON MICROSCOPY13.12880
1034V6O|1|BBStructural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes)ELECTRON MICROSCOPY14.72880
1044V6P|1|BBStructural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes)ELECTRON MICROSCOPY13.52880
1054V6R|1|BBStructural characterization of mRNA-tRNA translocation intermediates (class 6 of the six classes)ELECTRON MICROSCOPY11.52880
1064V6Q|1|BBStructural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes)ELECTRON MICROSCOPY11.52880
1073JA1|1|LAActivation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GELECTRON MICROSCOPY3.62904
1084V7D|1|AAStructure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)ELECTRON MICROSCOPY7.62897
1094V7C|1|BAStructure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure)ELECTRON MICROSCOPY7.62897
1103JCN|1|AStructures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association: Initiation Complex IELECTRON MICROSCOPY4.62897
1114V9D|1|CAStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION32897
1124U1U|1|BACrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.952897
1134U20|1|BACrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.92897
1144U1V|1|BACrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION32897
1154WF1|1|BACrystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.092897
1164U25|1|BACrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.92897
1174U27|1|BACrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.82897
1184U26|1|BACrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.82897
1194U24|1|BACrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.92897
1204V9C|1|DAAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.32897
1214WOI|1|BA4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION32897
1224V6T|1|BAStructure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loadingELECTRON MICROSCOPY8.32903
1233JBV|1|bMechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsELECTRON MICROSCOPY3.322903
1244V74|1|BA70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)ELECTRON MICROSCOPY172903
1254V73|1|BAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a)ELECTRON MICROSCOPY152903
1264V72|1|BAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)ELECTRON MICROSCOPY132903
1274V70|1|BAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)ELECTRON MICROSCOPY172903
1284V75|1|BAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)ELECTRON MICROSCOPY122903
1294V65|1|BBStructure of the E. coli ribosome in the Pre-accommodation stateELECTRON MICROSCOPY92903
1304V66|1|BBStructure of the E. coli ribosome and the tRNAs in Post-accommodation stateELECTRON MICROSCOPY92903
1313BBX|1|BThe Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complexELECTRON MICROSCOPY102902
1324V4V|1|B0Structure of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056ELECTRON MICROSCOPY152740
1334V4W|1|B0Structure of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143ELECTRON MICROSCOPY152740
1343J8G|1|BElectron cryo-microscopy structure of EngA bound with the 50S ribosomal subunitELECTRON MICROSCOPY52874
1352RDO|1|B50S subunit with EF-G(GDPNP) and RRF boundELECTRON MICROSCOPY9.12841
1364V48|1|A0Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the initiation-like state of E. coli 70S ribosomeELECTRON MICROSCOPY11.52536
1373DG2|1|BCoordinates of 16S and 23S rRNAs fitted into the cryo-EM map of a pretranslocation complexELECTRON MICROSCOPY102841
1384V47|1|A0Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the EF-G.GTP state of E. coli 70S ribosomeELECTRON MICROSCOPY12.32536
1393DG5|1|BCoordinates of 16S and 23S rRNAs fitted into the cryo-EM map of RF3-bound termination complexELECTRON MICROSCOPY15.52841
1403DG4|1|BCoordinates of 16S and 23S rRNAs fitted into the cryo-EM map of RF1-bound termination complexELECTRON MICROSCOPY12.82841
1413DG0|1|BCoordinates of 16S and 23S rRNAs fitted into the cryo-EM map of EF-G-bound translocation complexELECTRON MICROSCOPY10.82841
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