Motif HL_53279.1 Version HL_53279.1 of this group appears in releases 1.18 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | 2-3 | 2-6 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3U5F_017 | 3U5F | 0.0000 | 1 | 6 | 18S rRNA | C | 716 | C | 717 | U | 719 | G | 720 | U | 721 | G | 722 | cWW | ncSW | ||
| 2 | HL_4R0D_013 | 4R0D | 0.9749 | 0 | A | Group II catalytic intron | G | 524 | U | 525 | U | 526 | C | 527 | G | 528 | C | 529 | cWW | cSW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CCUUGUG | 1 |
| GUUCGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUUGU | 1 |
| UUCG | 1 |
Release history
| Release | 1.18 |
|---|---|
| Date | 2014-10-09 |
| Status | New id, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in HL_53279.1 | Only in the parent motif |
|---|---|---|---|
| HL_62880.1 Compare | HL_3U5F_017 | HL_4R0D_013 |
Children motifs
This motif has no children motifs.
Coloring options: