Motif IL_42230.1 Version IL_42230.1 of this group appears in releases 3.89 to 3.89
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 1-3 | 1-7 | 5-6 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5TBW_036 | 5TBW | 0.0000 | 1 | 180 degree turn | 1 | LSU rRNA | C | 977 | G | 978 | U | 979 | A | 980 | U | 981 | * | A | 1102 | G | 1104 | cWW | cWW | |
| 2 | IL_5J7L_294 | 5J7L | 0.9433 | 1 | DA | LSU rRNA | C | 1582 | A | 1583 | C | 1585 | A | 1586 | G | 1587 | * | U | 1415 | G | 1416 | cSW | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGUAU*AAG | 1 |
| CAUCAG*UG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GUA*A | 1 |
| AUCA* | 1 |
Release history
| Release | 3.89 |
|---|---|
| Date | 2024-10-09 |
| Status | New id, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- 180 degree turn (1)
- Basepair signature
- cWW-L-cWW-L-L
- Heat map statistics
- Min 0.94 | Avg 0.47 | Max 0.94
Coloring options: