#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6 7break 8 9 10 11break 12 131-135-117-811-12
1 J3_4QJD_0024QJD0.00000D+CTwister RNA sequenceG55A56A57A58A59A60G61*C11G12C13C14*G39C40cWWncsScWWcWW
2 J3_4OJI_0014OJI0.27930ARNA (52-MER)G35A36U37A38A39A40A41*U12G13C14C15*G19C20cWWcWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
CGCC*GC*GAAAAAG1
UGCC*GC*GAUAAAA1
Non-Watson-Crick part of the motif
SequenceCounts
GC**AAAAA1
GC**AUAAA1

Release history

Release3.883.89
Date2024-09-112024-10-09
StatusNew id, 1 parentExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (2)
  • Basepair signature
    cWW-F-cWW-F-F-F-F-F-F-cWW
    Heat map statistics
    Min 0.28 | Avg 0.14 | Max 0.28
    Help

    Coloring options:

    Copyright 2025 BGSU RNA group. Page generated in 0.1128 s