#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
11GQU|1|A (rep)DNA (5'(*AP*TP*AP*UP*AP*T)-3')Crystal structure of an alternating A-T oligonucleotide fragment with Hoogsteen base pairingX-ray diffraction2.52002-12-05
21GQU|1|BDNA (5'(*AP*TP*AP*UP*AP*T)-3')Crystal structure of an alternating A-T oligonucleotide fragment with Hoogsteen base pairingX-ray diffraction2.52002-12-05
31GQU|1|CDNA (5'(*AP*TP*AP*UP*AP*T)-3')Crystal structure of an alternating A-T oligonucleotide fragment with Hoogsteen base pairingX-ray diffraction2.52002-12-05
41GQU|1|DDNA (5'(*AP*TP*AP*UP*AP*T)-3')Crystal structure of an alternating A-T oligonucleotide fragment with Hoogsteen base pairingX-ray diffraction2.52002-12-05
51RSB|1|A5'-D(*AP*TP*AP*TP*AP*T)-3'X-ray study of the DNA oligomer d(ATATAT) in P65 space groupX-ray diffraction2.172004-05-25
61RSB|1|B5'-D(*AP*TP*AP*TP*AP*T)-3'X-ray study of the DNA oligomer d(ATATAT) in P65 space groupX-ray diffraction2.172004-05-25
71RSB|1|C5'-D(*AP*TP*AP*TP*AP*T)-3'X-ray study of the DNA oligomer d(ATATAT) in P65 space groupX-ray diffraction2.172004-05-25
81RSB|1|D5'-D(*AP*TP*AP*TP*AP*T)-3'X-ray study of the DNA oligomer d(ATATAT) in P65 space groupX-ray diffraction2.172004-05-25

Release history

Release0.10.20.30.40.5
Date2011-02-052011-02-122011-02-162011-02-192011-02-26

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLengthNAKB NA annotationNAKB protein annotation
11RSB|1|BX-ray study of the DNA oligomer d(ATATAT) in P65 space groupX-RAY DIFFRACTION2.176parallel helix,structure
21GQU|1|BCrystal structure of an alternating A-T oligonucleotide fragment with Hoogsteen base pairingX-RAY DIFFRACTION2.56parallel helix,structure
31GQU|1|ACrystal structure of an alternating A-T oligonucleotide fragment with Hoogsteen base pairingX-RAY DIFFRACTION2.56parallel helix,structure
41RSB|1|AX-ray study of the DNA oligomer d(ATATAT) in P65 space groupX-RAY DIFFRACTION2.176parallel helix,structure
51RSB|1|DX-ray study of the DNA oligomer d(ATATAT) in P65 space groupX-RAY DIFFRACTION2.176parallel helix,structure
61GQU|1|CCrystal structure of an alternating A-T oligonucleotide fragment with Hoogsteen base pairingX-RAY DIFFRACTION2.56parallel helix,structure
71GQU|1|DCrystal structure of an alternating A-T oligonucleotide fragment with Hoogsteen base pairingX-RAY DIFFRACTION2.56parallel helix,structure
81RSB|1|CX-ray study of the DNA oligomer d(ATATAT) in P65 space groupX-RAY DIFFRACTION2.176parallel helix,structure

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


Coloring options:

Copyright 2024 BGSU RNA group. Page generated in 0.0108 s