#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
16X1B|1|D (rep)DNA (5'-R(*GP*U)-3')synthetic constructCrystal Structure of NSP15 Endoribonuclease from SARS CoV-2 in the Complex with the Product Nucleotide GpU.X-ray diffraction1.972020-05-27
26X1B|1|FDNA (5'-R(*GP*U)-3')synthetic constructCrystal Structure of NSP15 Endoribonuclease from SARS CoV-2 in the Complex with the Product Nucleotide GpU.X-ray diffraction1.972020-05-27
35K77|1|xbrnch 2 of branched RNA 5'-UAA(-2'GU)CA-3'Saccharomyces cerevisiaeDbr1 in complex with 7-mer branched RNAX-ray diffraction2.172016-12-07
45K77|1|zbrnch 2 of branched RNA 5'-UAA(-2'GU)CA-3'Saccharomyces cerevisiaeDbr1 in complex with 7-mer branched RNAX-ray diffraction2.172016-12-07
55K77|1|vbrnch 2 of branched RNA 5'-UAA(-2'GU)CA-3'Saccharomyces cerevisiaeDbr1 in complex with 7-mer branched RNAX-ray diffraction2.172016-12-07
65K77|1|ybrnch 2 of branched RNA 5'-UAA(-2'GU)CA-3'Saccharomyces cerevisiaeDbr1 in complex with 7-mer branched RNAX-ray diffraction2.172016-12-07
75K77|1|wbrnch 2 of branched RNA 5'-UAA(-2'GU)CA-3'Saccharomyces cerevisiaeDbr1 in complex with 7-mer branched RNAX-ray diffraction2.172016-12-07
85F6C|1|CRNA (5'-R(P*GP*U)-3')Escherichia coliThe structure of E. coli RNase E catalytically inactive mutant with RNA boundX-ray diffraction32016-12-14
96I0T|1|BRNA (5'-R(*GP*U)-3')Drosophila melanogasterCrystal structure of DmTailor in complex with GpUX-ray diffraction22018-12-05
101B2M|1|C5'-R(*GP*(U34))-3'THREE-DIMENSIONAL STRUCTURE OF RIBONULCEASE T1 COMPLEXED WITH AN ISOSTERIC PHOSPHONATE ANALOGUE OF GPU: ALTERNATE SUBSTRATE BINDING MODES AND CATALYSIS.X-ray diffraction21999-03-25
111B2M|1|D5'-R(*GP*(U34))-3'THREE-DIMENSIONAL STRUCTURE OF RIBONULCEASE T1 COMPLEXED WITH AN ISOSTERIC PHOSPHONATE ANALOGUE OF GPU: ALTERNATE SUBSTRATE BINDING MODES AND CATALYSIS.X-ray diffraction21999-03-25
121B2M|1|E5'-R(*GP*(U34))-3'THREE-DIMENSIONAL STRUCTURE OF RIBONULCEASE T1 COMPLEXED WITH AN ISOSTERIC PHOSPHONATE ANALOGUE OF GPU: ALTERNATE SUBSTRATE BINDING MODES AND CATALYSIS.X-ray diffraction21999-03-25

Release history

Release3.1283.1293.1303.1313.1323.1333.1343.1353.1363.1373.1383.1393.1403.1413.1423.1433.1443.1453.1463.1473.1483.1493.1503.1513.1523.1533.1543.1553.1563.1573.1583.1593.1603.1613.1623.1633.1643.1653.1663.1673.1683.1693.1703.1713.1723.1733.1743.1753.1763.1773.1783.1793.1803.1813.1823.1833.1843.1853.1863.1873.1883.1893.1903.1913.1923.1933.1943.1953.1963.1973.1983.1993.2003.2013.2023.2033.2043.2053.2063.2073.2083.2093.2103.2113.2123.2133.2143.2153.2163.2173.2183.2193.2203.2213.2223.2233.2243.2253.2263.2273.2283.2293.2303.2313.2323.2333.2343.2353.2363.2373.2383.2393.2403.2413.2423.2433.2443.2453.246
Date2020-05-272020-06-032020-06-102020-06-172020-06-242020-07-012020-07-082020-07-152020-07-222020-07-292020-08-052020-08-122020-08-192020-08-262020-09-022020-09-092020-09-162020-09-232020-09-302020-10-072020-10-142020-10-212020-10-282020-11-042020-11-112020-11-182020-11-252020-12-022020-12-092020-12-162020-12-232020-12-302021-01-062021-01-132021-01-202021-01-272021-02-032021-02-102021-02-172021-02-242021-03-032021-03-102021-03-172021-03-242021-03-312021-04-072021-04-142021-04-212021-04-282021-05-052021-05-122021-05-192021-05-262021-06-022021-06-092021-06-162021-06-232021-06-302021-07-072021-07-142021-07-212021-07-282021-08-042021-08-112021-08-182021-08-252021-09-012021-09-082021-09-152021-09-222021-09-292021-10-062021-10-132021-10-202021-10-272021-11-032021-11-102021-11-172021-11-242021-12-012021-12-082021-12-152021-12-222021-12-292022-01-052022-01-122022-01-192022-01-262022-02-022022-02-092022-02-162022-02-232022-03-022022-03-092022-03-162022-03-232022-03-302022-04-062022-04-132022-04-202022-04-272022-05-042022-05-112022-05-182022-05-252022-06-012022-06-082022-06-152022-06-222022-06-292022-07-062022-07-132022-07-202022-07-272022-08-032022-08-102022-08-172022-08-242022-08-31

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.0_78372.4NR_3.0_78372.33.128(10) 1B2M|1|C, 1B2M|1|D, 1B2M|1|E, 5F6C|1|C, 5K77|1|v, 5K77|1|w, 5K77|1|x, 5K77|1|y, 5K77|1|z, 6I0T|1|B(2) 6X1B|1|D, 6X1B|1|F(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_3.0_78372.4NR_3.0_78372.53.247(12) 1B2M|1|C, 1B2M|1|D, 1B2M|1|E, 5F6C|1|C, 5K77|1|v, 5K77|1|w, 5K77|1|x, 5K77|1|y, 5K77|1|z, 6I0T|1|B, 6X1B|1|D, 6X1B|1|F(0) (1) 7VA6|1|C

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
16I0T|1|BCrystal structure of DmTailor in complex with GpUX-RAY DIFFRACTION22
21B2M|1|CTHREE-DIMENSIONAL STRUCTURE OF RIBONULCEASE T1 COMPLEXED WITH AN ISOSTERIC PHOSPHONATE ANALOGUE OF GPU: ALTERNATE SUBSTRATE BINDING MODES AND CATALYSIS.X-RAY DIFFRACTION21
31B2M|1|ETHREE-DIMENSIONAL STRUCTURE OF RIBONULCEASE T1 COMPLEXED WITH AN ISOSTERIC PHOSPHONATE ANALOGUE OF GPU: ALTERNATE SUBSTRATE BINDING MODES AND CATALYSIS.X-RAY DIFFRACTION21
41B2M|1|DTHREE-DIMENSIONAL STRUCTURE OF RIBONULCEASE T1 COMPLEXED WITH AN ISOSTERIC PHOSPHONATE ANALOGUE OF GPU: ALTERNATE SUBSTRATE BINDING MODES AND CATALYSIS.X-RAY DIFFRACTION21
55F6C|1|CThe structure of E. coli RNase E catalytically inactive mutant with RNA boundX-RAY DIFFRACTION32
66X1B|1|FCrystal Structure of NSP15 Endoribonuclease from SARS CoV-2 in the Complex with the Product Nucleotide GpU.X-RAY DIFFRACTION1.972
76X1B|1|DCrystal Structure of NSP15 Endoribonuclease from SARS CoV-2 in the Complex with the Product Nucleotide GpU.X-RAY DIFFRACTION1.972
85K77|1|yDbr1 in complex with 7-mer branched RNAX-RAY DIFFRACTION2.172
95K77|1|zDbr1 in complex with 7-mer branched RNAX-RAY DIFFRACTION2.172
105K77|1|wDbr1 in complex with 7-mer branched RNAX-RAY DIFFRACTION2.172
115K77|1|vDbr1 in complex with 7-mer branched RNAX-RAY DIFFRACTION2.172
125K77|1|xDbr1 in complex with 7-mer branched RNAX-RAY DIFFRACTION2.172

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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