Equivalence class NR_3.5_38286.2 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 7DCO|1|B (rep) | U5 spliceosomal RNA | pre-mRNA, U5 snRNA | Saccharomyces cerevisiae | Eukarya | RF00020 | Cryo-EM structure of the activated spliceosome (Bact complex) at an atomic resolution of 2.5 angstrom | Electron microscopy | 2.5 | 2021-03-17 |
| 2 | 7B9V|1|5 | U5 spliceosomal RNA | 5' exon of UBC4 mRNA, U5 snRNA | Saccharomyces cerevisiae | Eukarya | RF00020 | Yeast C complex spliceosome at 2.8 Angstrom resolution with Prp18/Slu7 bound | Electron microscopy | 2.8 | 2021-03-10 |
| 3 | 6J6G|1|D | U5 spliceosomal RNA | ACT1 pre-mRNA, U5 snRNA | Saccharomyces cerevisiae | Eukarya | RF00020 | Cryo-EM structure of the yeast B*-a2 complex at an average resolution of 3.2 angstrom | Electron microscopy | 3.2 | 2019-04-24 |
| 4 | 6BK8|1|5 | U5 spliceosomal RNA | RNA (34-MER), U5 snRNA | Saccharomyces cerevisiae | Eukarya | RF00020 | S. cerevisiae spliceosomal post-catalytic P complex | Electron microscopy | 3.3 | 2018-02-21 |
| 5 | 5GMK|1|D | U5 spliceosomal RNA | 5'-Exon, U5 snRNA | Saccharomyces cerevisiae | Eukarya | RF00020 | Cryo-EM structure of the Catalytic Step I spliceosome (C complex) at 3.4 angstrom resolution | Electron microscopy | 3.4 | 2016-08-17 |
| 6 | 5GM6|1|D | U5 spliceosomal RNA | Saccharomyces cerevisiae strain CDRDR_sf_H chromosome VII sequence | Saccharomyces cerevisiae | Eukarya | RF00020 | Cryo-EM structure of the activated spliceosome (Bact complex) at 3.5 angstrom resolution | Electron microscopy | 3.5 | 2016-09-21 |
| 7 | 5Y88|1|B | U5 spliceosomal RNA | U5 snRNA | Saccharomyces cerevisiae | Eukarya | RF00020 | Cryo-EM structure of the intron-lariat spliceosome ready for disassembly from S.cerevisiae at 3.5 angstrom | Electron microscopy | 3.46 | 2018-08-01 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|---|
| 1 | 7DCO|1|B | Cryo-EM structure of the activated spliceosome (Bact complex) at an atomic resolution of 2.5 angstrom | ELECTRON MICROSCOPY | 2.5 | 179 | |
| 2 | 6BK8|1|5 | S. cerevisiae spliceosomal post-catalytic P complex | ELECTRON MICROSCOPY | 3.3 | 103 | |
| 3 | 5GMK|1|D | Cryo-EM structure of the Catalytic Step I spliceosome (C complex) at 3.4 angstrom resolution | ELECTRON MICROSCOPY | 3.4 | 117 | |
| 4 | 5Y88|1|B | Cryo-EM structure of the intron-lariat spliceosome ready for disassembly from S.cerevisiae at 3.5 angstrom | ELECTRON MICROSCOPY | 3.46 | 117 | |
| 5 | 5GM6|1|D | Cryo-EM structure of the activated spliceosome (Bact complex) at 3.5 angstrom resolution | ELECTRON MICROSCOPY | 3.5 | 117 | |
| 6 | 6J6G|1|D | Cryo-EM structure of the yeast B*-a2 complex at an average resolution of 3.2 angstrom | ELECTRON MICROSCOPY | 3.2 | 179 | |
| 7 | 7B9V|1|5 | Yeast C complex spliceosome at 2.8 Angstrom resolution with Prp18/Slu7 bound | ELECTRON MICROSCOPY | 2.8 | 178 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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