Equivalence class NR_4.0_80214.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 8K22|1|P (rep) | RNA (60-MER) | Vibrio phage ICP1_2004_A | ICP1 Csy-dsDNA-Cas1-Cas2/3 complex (half form) | Electron microscopy | 2.92 | 2024-07-17 | |||
| 2 | 8K29|1|P | RNA (60-MER) | Vibrio phage ICP1_2004_A | ICP1 Csy-dsDNA complex (form 2) | Electron microscopy | 3.18 | 2024-07-17 | |||
| 3 | 8K24|1|P | RNA (60-MER) | Vibrio phage ICP1_2004_A | ICP1 Csy-dsDNA-Cas1-Cas2/3 complex (fully assembled form), C2 symmetry | Electron microscopy | 3.72 | 2024-07-17 | |||
| 4 | 8K24|1|p | RNA (60-MER) | Vibrio phage ICP1_2004_A | ICP1 Csy-dsDNA-Cas1-Cas2/3 complex (fully assembled form), C2 symmetry | Electron microscopy | 3.72 | 2024-07-17 | |||
| 5 | 8K23|1|P | RNA (60-MER) | Vibrio phage ICP1_2004_A | ICP1 Csy-dsDNA-Cas1-Cas2/3 complex (fully assembled form) composited structure with C1 symmetry | Electron microscopy | 3.75 | 2024-07-17 | |||
| 6 | 8K23|1|p | RNA (60-MER) | Vibrio phage ICP1_2004_A | ICP1 Csy-dsDNA-Cas1-Cas2/3 complex (fully assembled form) composited structure with C1 symmetry | Electron microscopy | 3.75 | 2024-07-17 | |||
| 7 | 7WWV|1|M | guide-RNA | Vibrio phage ICP1_2011_A | DNA bound-ICP1 Csy complex | Electron microscopy | 3.2 | 2023-04-26 | |||
| 8 | 8K27|1|P | RNA (60-MER) | Vibrio phage ICP1_2004_A | ICP1 Csy-dsDNA complex (partial duplex) | Electron microscopy | 3.6 | 2024-07-17 |
Release history
| Release | 3.344 |
|---|---|
| Date | 2024-07-17 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|---|
| 1 | 8K29|1|P | ICP1 Csy-dsDNA complex (form 2) | ELECTRON MICROSCOPY | 3.18 | 60 | |
| 2 | 8K24|1|P | ICP1 Csy-dsDNA-Cas1-Cas2/3 complex (fully assembled form), C2 symmetry | ELECTRON MICROSCOPY | 3.72 | 60 | |
| 3 | 8K23|1|P | ICP1 Csy-dsDNA-Cas1-Cas2/3 complex (fully assembled form) composited structure with C1 symmetry | ELECTRON MICROSCOPY | 3.75 | 60 | |
| 4 | 8K22|1|P | ICP1 Csy-dsDNA-Cas1-Cas2/3 complex (half form) | ELECTRON MICROSCOPY | 2.92 | 60 | |
| 5 | 8K23|1|p | ICP1 Csy-dsDNA-Cas1-Cas2/3 complex (fully assembled form) composited structure with C1 symmetry | ELECTRON MICROSCOPY | 3.75 | 60 | |
| 6 | 8K24|1|p | ICP1 Csy-dsDNA-Cas1-Cas2/3 complex (fully assembled form), C2 symmetry | ELECTRON MICROSCOPY | 3.72 | 60 | |
| 7 | 8K27|1|P | ICP1 Csy-dsDNA complex (partial duplex) | ELECTRON MICROSCOPY | 3.6 | 60 | |
| 8 | 7WWV|1|M | DNA bound-ICP1 Csy complex | ELECTRON MICROSCOPY | 3.2 | 39 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
Coloring options: