#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
13CD6|1|4 (rep)RNA (5'-R(*CP*CP*(PPU))-3')Co-cystal of large Ribosomal Subunit mutant G2616A with CC-PuromycinX-ray diffraction2.752008-05-20
24YZV|1|Z6CC-puromycinStreptomyces albonigerPrecleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codonX-ray diffraction3.12015-10-21
34YZV|1|Z7CC-puromycinStreptomyces albonigerPrecleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codonX-ray diffraction3.12015-10-21
41VY7|1|AWCytidine-Puromycinsynthetic constructCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.82014-08-20
54LNT|1|Z8tRNA acceptor end mimicsynthetic constructCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-ray diffraction2.942014-08-06
64ZSN|1|Z6CC-puromycinsynthetic construct70S-wild-type HigB toxin complex bound to a AAA lysine codonX-ray diffraction3.62016-09-07
71VY7|1|CWCytidine-Puromycinsynthetic constructCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.82014-08-20
84LNT|1|Z6tRNA acceptor end mimicsynthetic constructCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-ray diffraction2.942014-08-06
94L47|1|Z8tRNA acceptor end mimicsynthetic constructCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the RibosomeX-ray diffraction3.222014-08-06
103CMA|1|6RNA (5'-R(*CP*CP*(8AN))-3')The structure of CCA and CCA-Phe-Cap-Bio bound to the large ribosomal subunit of Haloarcula marismortuiX-ray diffraction2.82008-09-23
114L47|1|Z6tRNA acceptor end mimicsynthetic constructCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the RibosomeX-ray diffraction3.222014-08-06
121VVJ|1|Z8RNA (5'-R(*CP*CP*(PPU))-3')synthetic constructCrystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-ray diffraction3.442014-08-06
131KQS|1|3CCAThe Haloarcula marismortui 50S Complexed with a Pretranslocational Intermediate in Protein SynthesisX-ray diffraction3.12002-02-22
141VVJ|1|Z6RNA (5'-R(*CP*CP*(PPU))-3')synthetic constructCrystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-ray diffraction3.442014-08-06
154LFZ|1|Z6tRNA acceptor end mimicsynthetic constructCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of ParomomycinX-ray diffraction3.922014-08-06
164TUA|1|Z5CC-Purosynthetic constructCrystal structure of ASL-Thr bound to Codon ACC-A on the RibosomeX-ray diffraction3.62015-05-13
174P70|1|Z6tRNA acceptor end mimicsynthetic constructCrystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the RibosomeX-ray diffraction3.682014-08-13
186N9E|1|1wCC-PmnEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with a short substrate mimic CC-Pmn and bound to mRNA and P-site tRNA at 3.7A resolutionX-ray diffraction3.72018-12-12
195LYB|1|Aaminoacyl-tRNA fragment ACCPmnsynthetic constructCrystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmnX-ray diffraction3.252016-11-23
204LT8|1|Z8tRNA acceptor end mimicsynthetic constructCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-ray diffraction3.142014-08-06
214LT8|1|Z6tRNA acceptor end mimicsynthetic constructCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-ray diffraction3.142014-08-06
223CMA|1|5RNA (5'-R(*CP*CP*A)-3')The structure of CCA and CCA-Phe-Cap-Bio bound to the large ribosomal subunit of Haloarcula marismortuiX-ray diffraction2.82008-09-23
234TUB|1|Z6CC-Purosynthetic constructCrystal structure of tRNA-Thr bound to Codon ACC-C on the RibosomeX-ray diffraction3.62015-05-13
244TUD|1|Z5CC-Purosynthetic constructCrystal structure of ASL-SufJ bound to Codon ACC-C on the RibosomeX-ray diffraction3.62015-05-13
254TUE|1|Z6CC-Purosynthetic constructCrystal structure of ASL-SufJ bound to Codon ACC-U on the RibosomeX-ray diffraction3.52015-05-13
264LFZ|1|Z8tRNA acceptor end mimicsynthetic constructCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of ParomomycinX-ray diffraction3.922014-08-06
274P70|1|Z8tRNA acceptor end mimicsynthetic constructCrystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the RibosomeX-ray diffraction3.682014-08-13
284LEL|1|Z8tRNA acceptor end mimicsynthetic constructCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the RibosomeX-ray diffraction3.92014-08-06
295LYB|1|aaminoacyl-tRNA fragment ACCPmnsynthetic constructCrystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmnX-ray diffraction3.252016-11-23
304L71|1|Z8tRNA acceptor end mimicsynthetic constructCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the RibosomeX-ray diffraction3.92014-08-06
314L71|1|Z6tRNA acceptor end mimicsynthetic constructCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the RibosomeX-ray diffraction3.92014-08-06
324TUB|1|Z5CC-Purosynthetic constructCrystal structure of tRNA-Thr bound to Codon ACC-C on the RibosomeX-ray diffraction3.62015-05-13
334TUA|1|Z6CC-Purosynthetic constructCrystal structure of ASL-Thr bound to Codon ACC-A on the RibosomeX-ray diffraction3.62015-05-13
344TUC|1|Z6CC-Purosynthetic constructCrystal structure of ASL-SufJ bound to Codon ACC-A on the RibosomeX-ray diffraction3.62015-05-13
356N9E|1|2wCC-PmnEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with a short substrate mimic CC-Pmn and bound to mRNA and P-site tRNA at 3.7A resolutionX-ray diffraction3.72018-12-12
364TUC|1|Z5CC-Purosynthetic constructCrystal structure of ASL-SufJ bound to Codon ACC-A on the RibosomeX-ray diffraction3.62015-05-13
374TUD|1|Z6CC-Purosynthetic constructCrystal structure of ASL-SufJ bound to Codon ACC-C on the RibosomeX-ray diffraction3.62015-05-13
384TUE|1|Z5CC-Purosynthetic constructCrystal structure of ASL-SufJ bound to Codon ACC-U on the RibosomeX-ray diffraction3.52015-05-13
394LSK|1|Z8tRNA acceptor end mimicsynthetic constructCrystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-ray diffraction3.482014-08-06
404LEL|1|Z6tRNA acceptor end mimicsynthetic constructCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the RibosomeX-ray diffraction3.92014-08-06
414LSK|1|Z6tRNA acceptor end mimicsynthetic constructCrystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-ray diffraction3.482014-08-06
424ZSN|1|Z7CC-puromycinsynthetic construct70S-wild-type HigB toxin complex bound to a AAA lysine codonX-ray diffraction3.62016-09-07
431VQO|1|45'-R(*CP*CP*(PPU))-3'The structure of CCPMN bound to the large ribosomal subunit haloarcula marismortuiX-ray diffraction2.22005-11-29
441M90|1|5CCACo-crystal structure of CCA-Phe-caproic acid-biotin and sparsomycin bound to the 50S ribosomal subunitX-ray diffraction2.82002-09-06
451QVG|1|5Oligonucleotide CCAStructure of CCA oligonucleotide bound to the tRNA binding sites of the large ribosomal subunit of Haloarcula marismortuiX-ray diffraction2.92003-11-11
463CXC|1|45'-R(*CP*CP*A)-3'The structure of an enhanced oxazolidinone inhibitor bound to the 50S ribosomal subunit of H. marismortuiX-ray diffraction32009-04-28
471Q7Y|1|5CCdA-P-PuromycinCrystal Structure of CCdAP-Puromycin bound at the Peptidyl transferase center of the 50S ribosomal subunitX-ray diffraction3.22003-10-07
481QVG|1|4Oligonucleotide CCAStructure of CCA oligonucleotide bound to the tRNA binding sites of the large ribosomal subunit of Haloarcula marismortuiX-ray diffraction2.92003-11-11
491QVG|1|3Oligonucleotide CCAStructure of CCA oligonucleotide bound to the tRNA binding sites of the large ribosomal subunit of Haloarcula marismortuiX-ray diffraction2.92003-11-11
501Q86|1|5CCA-phenylalanine-cariotic-acid-biotinCrystal structure of CCA-Phe-cap-biotin bound simultaneously at half occupancy to both the A-site and P-site of the the 50S ribosomal Subunit.X-ray diffraction32003-10-07
513CME|1|6RNA (5'-R(*CP*CP*(8AN))-3')synthetic constructThe Structure of CA and CCA-PHE-CAP-BIO Bound to the Large Ribosomal Subunit of Haloarcula MarismortuiX-ray diffraction2.952008-09-23
521Q86|1|6CCA-phenylalanine-cariotic-acid-biotinCrystal structure of CCA-Phe-cap-biotin bound simultaneously at half occupancy to both the A-site and P-site of the the 50S ribosomal Subunit.X-ray diffraction32003-10-07
533CME|1|5RNA (5'-R(*C*CP*A)-3')synthetic constructThe Structure of CA and CCA-PHE-CAP-BIO Bound to the Large Ribosomal Subunit of Haloarcula MarismortuiX-ray diffraction2.952008-09-23
547PWG|1|EP-site tRNAGiardia lamblia ATCC 50803Cryo-EM structure of large subunit of Giardia lamblia ribosome at 2.7 A resolutionElectron microscopy2.752022-04-20
557PWO|1|EP-site tRNAGiardia lamblia ATCC 50803Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolutionElectron microscopy2.752022-04-20
567Y38|1|ZRNA (5'-R(P*CP*CP*A)-3')in vitro transcription vector pT7-TP(deltai)Molecular architecture of the chikungunya virus replication complexElectron microscopy2.82022-12-14
578OIT|1|B7E-site tRNAHomo sapiens39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNAElectron microscopy2.92023-06-14
588IP8|1|dlCCA end of E-tRNATriticum aestivumWheat 80S ribosome stalled on AUG-Stop boron dependentlyElectron microscopy2.92024-02-21
596S0K|1|2tRNA-CCAEscherichia coliRibosome nascent chain in complex with SecAElectron microscopy3.12019-10-09
608OIR|1|B7E-site tRNAHomo sapiens55S human mitochondrial ribosome with mtRF1 and P-site tRNAElectron microscopy3.12023-06-14
616OTR|1|ZACCPurosynthetic constructDimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)X-ray diffraction3.122019-08-21
626OTR|1|ZBCCPurosynthetic constructDimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)X-ray diffraction3.122019-08-21
635O60|1|2tRNA CCA-end acetylated (Phe)Mycolicibacterium smegmatisStructure of the 50S large ribosomal subunit from Mycobacterium smegmatisElectron microscopy3.182017-07-12
645GAE|1|xtRNA CCA end (5'-R(P*CP*CP*A)-3')Escherichia coliRNC in complex with a translocating SecYEGElectron microscopy3.332016-01-27
654V19|1|CTRNASus scrofaStructure of the large subunit of the mammalian mitoribosome, part 1 of 2Electron microscopy3.42014-10-08
664V19|1|ZTRNASus scrofaStructure of the large subunit of the mammalian mitoribosome, part 1 of 2Electron microscopy3.42014-10-08
675LZD|1|wCCA 3' end of E-site tRNASec (low occupancy)Escherichia coliStructure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)Electron microscopy3.42016-11-23
686OXI|1|ZACCPuroStreptomyces albonigerDimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (UAA)X-ray diffraction3.492019-08-21
698OIQ|1|B7E-site tRNASus scrofa39S mammalian mitochondrial large ribosomal subunit with mtRF1 and P-site tRNAElectron microscopy3.52023-06-14
705LZE|1|wCCA 3' end of E-site tRNASec (low occupancy)Escherichia coliStructure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)Electron microscopy3.52016-11-23
718FOM|1|Z6CC-purosynthetic constructCrystal structure of tRNA^Lys(SUU) bound to UAA codon in the ribosomal P siteX-ray diffraction3.582023-03-29
728FOM|1|Z8CC-purosynthetic constructCrystal structure of tRNA^Lys(SUU) bound to UAA codon in the ribosomal P siteX-ray diffraction3.582023-03-29
738OIN|1|B7E-site tRNASus scrofa55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNAElectron microscopy3.62023-06-14
748FON|1|Z6CC-purosynthetic constructCrystal structure of tRNA^Lys(SUU) bound to AUA codon in the ribosomal P siteX-ray diffraction3.642023-03-29
758FON|1|Z8CC-purosynthetic constructCrystal structure of tRNA^Lys(SUU) bound to AUA codon in the ribosomal P siteX-ray diffraction3.642023-03-29
766NDK|1|ZBtRNA acceptor end mimicsynthetic constructStructure of ASLSufA6 A37.5 bound to the 70S A siteX-ray diffraction3.642019-02-27
775GAD|1|2tRNA CCAendEscherichia coliRNC-SRP-SR complex early stateElectron microscopy3.72016-01-27
785GAH|1|2tRNA CCAendEscherichia coliRNC in complex with SRP with detached NG domainElectron microscopy3.82016-01-27
795GAG|1|2tRNA CCAendEscherichia coliRNC in complex with SRP-SR in the closed stateElectron microscopy3.82016-01-27
803J7Z|1|7P-tRNA CCA-endEscherichia coliStructure of the E. coli 50S subunit with ErmCL nascent chainElectron microscopy3.92014-10-22
816OXA|1|ZACCPuroStreptomyces albonigerDimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU)X-ray diffraction3.252019-08-21
826OXA|1|ZBCCPuroStreptomyces albonigerDimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU)X-ray diffraction3.252019-08-21
835GAF|1|2tRNA CCAendEscherichia coliRNC in complex with SRPElectron microscopy4.32016-02-03
846NDK|1|ZAtRNA acceptor end mimicsynthetic constructStructure of ASLSufA6 A37.5 bound to the 70S A siteX-ray diffraction3.642019-02-27
855NCO|1|2P-site tRNA-CCA endEscherichia coliQuaternary complex between SRP, SR, and SecYEG bound to the translating ribosomeElectron microscopy4.82017-05-24
865LZC|1|wCCA 3' end of E-site tRNASec (low occupancy)Escherichia coliStructure of SelB-Sec-tRNASec bound to the 70S ribosome in the codon reading state (CR)Electron microscopy4.82016-11-23
876OXI|1|ZBCCPuroStreptomyces albonigerDimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (UAA)X-ray diffraction3.492019-08-21
885LZB|1|wCCA 3' end of E-site tRNASec (low occupancy)Escherichia coliStructure of SelB-Sec-tRNASec bound to the 70S ribosome in the initial binding state (IB)Electron microscopy5.32016-11-23
893J5L|1|75'-R(*CP*CP*A)-3'Structure of the E. coli 50S subunit with ErmBL nascent chainElectron microscopy6.62014-03-26

Release history

Release3.378
Date2025-03-13

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This classParent classesRelease idIntersectionAdded to this classOnly in parent

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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
15LYB|1|aCrystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmnX-RAY DIFFRACTION3.253
25LYB|1|ACrystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmnX-RAY DIFFRACTION3.253
36N9E|1|2wCrystal structure of the Thermus thermophilus 70S ribosome in complex with a short substrate mimic CC-Pmn and bound to mRNA and P-site tRNA at 3.7A resolutionX-RAY DIFFRACTION3.72
47PWG|1|ECryo-EM structure of large subunit of Giardia lamblia ribosome at 2.7 A resolutionELECTRON MICROSCOPY2.753
57PWO|1|ECryo-EM structure of Giardia lamblia ribosome at 2.75 A resolutionELECTRON MICROSCOPY2.753
61VVJ|1|Z6Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.443
74L47|1|Z6Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION3.223
84LSK|1|Z6Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.483
96OTR|1|ZBDimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)X-RAY DIFFRACTION3.123
106OXA|1|ZADimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU)X-RAY DIFFRACTION3.253
116OXI|1|ZBDimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (UAA)X-RAY DIFFRACTION3.493
124LEL|1|Z6Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.93
134LNT|1|Z8Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.943
144TUA|1|Z5Crystal structure of ASL-Thr bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.63
154TUE|1|Z6Crystal structure of ASL-SufJ bound to Codon ACC-U on the RibosomeX-RAY DIFFRACTION3.53
164L47|1|Z8Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION3.223
174TUB|1|Z6Crystal structure of tRNA-Thr bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.63
186OXA|1|ZBDimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU)X-RAY DIFFRACTION3.253
196OTR|1|ZADimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)X-RAY DIFFRACTION3.123
204LFZ|1|Z6Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of ParomomycinX-RAY DIFFRACTION3.923
216OXI|1|ZADimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (UAA)X-RAY DIFFRACTION3.493
224YZV|1|Z7Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codonX-RAY DIFFRACTION3.13
234ZSN|1|Z770S-wild-type HigB toxin complex bound to a AAA lysine codonX-RAY DIFFRACTION3.63
244TUD|1|Z5Crystal structure of ASL-SufJ bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.63
254LNT|1|Z6Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.943
264LT8|1|Z6Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.143
274L71|1|Z6Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the RibosomeX-RAY DIFFRACTION3.93
284LEL|1|Z8Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.93
298FON|1|Z6Crystal structure of tRNA^Lys(SUU) bound to AUA codon in the ribosomal P siteX-RAY DIFFRACTION3.643
304TUE|1|Z5Crystal structure of ASL-SufJ bound to Codon ACC-U on the RibosomeX-RAY DIFFRACTION3.53
316N9E|1|1wCrystal structure of the Thermus thermophilus 70S ribosome in complex with a short substrate mimic CC-Pmn and bound to mRNA and P-site tRNA at 3.7A resolutionX-RAY DIFFRACTION3.73
324TUB|1|Z5Crystal structure of tRNA-Thr bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.63
334TUC|1|Z6Crystal structure of ASL-SufJ bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.63
344TUC|1|Z5Crystal structure of ASL-SufJ bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.63
356NDK|1|ZBStructure of ASLSufA6 A37.5 bound to the 70S A siteX-RAY DIFFRACTION3.643
364P70|1|Z8Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the RibosomeX-RAY DIFFRACTION3.683
378FON|1|Z8Crystal structure of tRNA^Lys(SUU) bound to AUA codon in the ribosomal P siteX-RAY DIFFRACTION3.643
386NDK|1|ZAStructure of ASLSufA6 A37.5 bound to the 70S A siteX-RAY DIFFRACTION3.643
394YZV|1|Z6Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codonX-RAY DIFFRACTION3.13
404ZSN|1|Z670S-wild-type HigB toxin complex bound to a AAA lysine codonX-RAY DIFFRACTION3.63
414LT8|1|Z8Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.143
421VVJ|1|Z8Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.443
434TUA|1|Z6Crystal structure of ASL-Thr bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.63
448FOM|1|Z8Crystal structure of tRNA^Lys(SUU) bound to UAA codon in the ribosomal P siteX-RAY DIFFRACTION3.583
454LFZ|1|Z8Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of ParomomycinX-RAY DIFFRACTION3.923
464LSK|1|Z8Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.483
478FOM|1|Z6Crystal structure of tRNA^Lys(SUU) bound to UAA codon in the ribosomal P siteX-RAY DIFFRACTION3.583
484P70|1|Z6Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the RibosomeX-RAY DIFFRACTION3.683
494TUD|1|Z6Crystal structure of ASL-SufJ bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.63
504L71|1|Z8Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the RibosomeX-RAY DIFFRACTION3.93
511VY7|1|CWCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.83
521VY7|1|AWCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.83
533CME|1|5The Structure of CA and CCA-PHE-CAP-BIO Bound to the Large Ribosomal Subunit of Haloarcula MarismortuiX-RAY DIFFRACTION2.952
541VQO|1|4The structure of CCPMN bound to the large ribosomal subunit haloarcula marismortuiX-RAY DIFFRACTION2.22
551QVG|1|5Structure of CCA oligonucleotide bound to the tRNA binding sites of the large ribosomal subunit of Haloarcula marismortuiX-RAY DIFFRACTION2.93
563CMA|1|5The structure of CCA and CCA-Phe-Cap-Bio bound to the large ribosomal subunit of Haloarcula marismortuiX-RAY DIFFRACTION2.83
573CD6|1|4Co-cystal of large Ribosomal Subunit mutant G2616A with CC-PuromycinX-RAY DIFFRACTION2.752
581Q86|1|5Crystal structure of CCA-Phe-cap-biotin bound simultaneously at half occupancy to both the A-site and P-site of the the 50S ribosomal Subunit.X-RAY DIFFRACTION33
594V19|1|ZStructure of the large subunit of the mammalian mitoribosome, part 1 of 2ELECTRON MICROSCOPY3.43
603CME|1|6The Structure of CA and CCA-PHE-CAP-BIO Bound to the Large Ribosomal Subunit of Haloarcula MarismortuiX-RAY DIFFRACTION2.953
613CMA|1|6The structure of CCA and CCA-Phe-Cap-Bio bound to the large ribosomal subunit of Haloarcula marismortuiX-RAY DIFFRACTION2.83
625GAE|1|xRNC in complex with a translocating SecYEGELECTRON MICROSCOPY3.333
631QVG|1|4Structure of CCA oligonucleotide bound to the tRNA binding sites of the large ribosomal subunit of Haloarcula marismortuiX-RAY DIFFRACTION2.93
644V19|1|CStructure of the large subunit of the mammalian mitoribosome, part 1 of 2ELECTRON MICROSCOPY3.43
651M90|1|5Co-crystal structure of CCA-Phe-caproic acid-biotin and sparsomycin bound to the 50S ribosomal subunitX-RAY DIFFRACTION2.83
661Q86|1|6Crystal structure of CCA-Phe-cap-biotin bound simultaneously at half occupancy to both the A-site and P-site of the the 50S ribosomal Subunit.X-RAY DIFFRACTION33
673J5L|1|7Structure of the E. coli 50S subunit with ErmBL nascent chainELECTRON MICROSCOPY6.63
683CXC|1|4The structure of an enhanced oxazolidinone inhibitor bound to the 50S ribosomal subunit of H. marismortuiX-RAY DIFFRACTION33
691KQS|1|3The Haloarcula marismortui 50S Complexed with a Pretranslocational Intermediate in Protein SynthesisX-RAY DIFFRACTION3.13
703J7Z|1|7Structure of the E. coli 50S subunit with ErmCL nascent chainELECTRON MICROSCOPY3.93
717Y38|1|ZMolecular architecture of the chikungunya virus replication complexELECTRON MICROSCOPY2.83
726S0K|1|2Ribosome nascent chain in complex with SecAELECTRON MICROSCOPY3.13
735O60|1|2Structure of the 50S large ribosomal subunit from Mycobacterium smegmatisELECTRON MICROSCOPY3.183
745GAG|1|2RNC in complex with SRP-SR in the closed stateELECTRON MICROSCOPY3.83
755NCO|1|2Quaternary complex between SRP, SR, and SecYEG bound to the translating ribosomeELECTRON MICROSCOPY4.83
765GAF|1|2RNC in complex with SRPELECTRON MICROSCOPY4.33
775GAD|1|2RNC-SRP-SR complex early stateELECTRON MICROSCOPY3.73
785GAH|1|2RNC in complex with SRP with detached NG domainELECTRON MICROSCOPY3.83
791Q7Y|1|5Crystal Structure of CCdAP-Puromycin bound at the Peptidyl transferase center of the 50S ribosomal subunitX-RAY DIFFRACTION3.23
808OIR|1|B755S human mitochondrial ribosome with mtRF1 and P-site tRNAELECTRON MICROSCOPY3.13
818OIT|1|B739S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNAELECTRON MICROSCOPY2.93
828OIQ|1|B739S mammalian mitochondrial large ribosomal subunit with mtRF1 and P-site tRNAELECTRON MICROSCOPY3.53
838OIN|1|B755S mammalian mitochondrial ribosome with mtRF1 and P-site tRNAELECTRON MICROSCOPY3.63
848IP8|1|dlWheat 80S ribosome stalled on AUG-Stop boron dependentlyELECTRON MICROSCOPY2.93
851QVG|1|3Structure of CCA oligonucleotide bound to the tRNA binding sites of the large ribosomal subunit of Haloarcula marismortuiX-RAY DIFFRACTION2.93
865LZB|1|wStructure of SelB-Sec-tRNASec bound to the 70S ribosome in the initial binding state (IB)ELECTRON MICROSCOPY5.33
875LZC|1|wStructure of SelB-Sec-tRNASec bound to the 70S ribosome in the codon reading state (CR)ELECTRON MICROSCOPY4.83
885LZD|1|wStructure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)ELECTRON MICROSCOPY3.43
895LZE|1|wStructure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)ELECTRON MICROSCOPY3.53

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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