NR_all_95119.1

Members (89)
History
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#	IFE	Molecule	Organism	Title	Method	Res. Å	Date
1	3CD6\|1\|4 (rep)	RNA (5'-R(CPCP*(PPU))-3')		Co-cystal of large Ribosomal Subunit mutant G2616A with CC-Puromycin	X-ray diffraction	2.75	2008-05-20
2	4YZV\|1\|Z6	CC-puromycin	Streptomyces alboniger	Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codon	X-ray diffraction	3.1	2015-10-21
3	4YZV\|1\|Z7	CC-puromycin	Streptomyces alboniger	Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codon	X-ray diffraction	3.1	2015-10-21
4	1VY7\|1\|AW	Cytidine-Puromycin	synthetic construct	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.8	2014-08-20
5	4LNT\|1\|Z8	tRNA acceptor end mimic	synthetic construct	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-ray diffraction	2.94	2014-08-06
6	4ZSN\|1\|Z6	CC-puromycin	synthetic construct	70S-wild-type HigB toxin complex bound to a AAA lysine codon	X-ray diffraction	3.6	2016-09-07
7	1VY7\|1\|CW	Cytidine-Puromycin	synthetic construct	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.8	2014-08-20
8	4LNT\|1\|Z6	tRNA acceptor end mimic	synthetic construct	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-ray diffraction	2.94	2014-08-06
9	4L47\|1\|Z8	tRNA acceptor end mimic	synthetic construct	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the Ribosome	X-ray diffraction	3.22	2014-08-06
10	3CMA\|1\|6	RNA (5'-R(CPCP*(8AN))-3')		The structure of CCA and CCA-Phe-Cap-Bio bound to the large ribosomal subunit of Haloarcula marismortui	X-ray diffraction	2.8	2008-09-23
11	4L47\|1\|Z6	tRNA acceptor end mimic	synthetic construct	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the Ribosome	X-ray diffraction	3.22	2014-08-06
12	1VVJ\|1\|Z8	RNA (5'-R(CPCP*(PPU))-3')	synthetic construct	Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome	X-ray diffraction	3.44	2014-08-06
13	1KQS\|1\|3	CCA		The Haloarcula marismortui 50S Complexed with a Pretranslocational Intermediate in Protein Synthesis	X-ray diffraction	3.1	2002-02-22
14	1VVJ\|1\|Z6	RNA (5'-R(CPCP*(PPU))-3')	synthetic construct	Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome	X-ray diffraction	3.44	2014-08-06
15	4LFZ\|1\|Z6	tRNA acceptor end mimic	synthetic construct	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin	X-ray diffraction	3.92	2014-08-06
16	4TUA\|1\|Z5	CC-Puro	synthetic construct	Crystal structure of ASL-Thr bound to Codon ACC-A on the Ribosome	X-ray diffraction	3.6	2015-05-13
17	4P70\|1\|Z6	tRNA acceptor end mimic	synthetic construct	Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome	X-ray diffraction	3.68	2014-08-13
18	6N9E\|1\|1w	CC-Pmn	Escherichia coli	Crystal structure of the Thermus thermophilus 70S ribosome in complex with a short substrate mimic CC-Pmn and bound to mRNA and P-site tRNA at 3.7A resolution	X-ray diffraction	3.7	2018-12-12
19	5LYB\|1\|A	aminoacyl-tRNA fragment ACCPmn	synthetic construct	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-ray diffraction	3.25	2016-11-23
20	4LT8\|1\|Z8	tRNA acceptor end mimic	synthetic construct	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome	X-ray diffraction	3.14	2014-08-06
21	4LT8\|1\|Z6	tRNA acceptor end mimic	synthetic construct	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome	X-ray diffraction	3.14	2014-08-06
22	3CMA\|1\|5	RNA (5'-R(CPCP*A)-3')		The structure of CCA and CCA-Phe-Cap-Bio bound to the large ribosomal subunit of Haloarcula marismortui	X-ray diffraction	2.8	2008-09-23
23	4TUB\|1\|Z6	CC-Puro	synthetic construct	Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome	X-ray diffraction	3.6	2015-05-13
24	4TUD\|1\|Z5	CC-Puro	synthetic construct	Crystal structure of ASL-SufJ bound to Codon ACC-C on the Ribosome	X-ray diffraction	3.6	2015-05-13
25	4TUE\|1\|Z6	CC-Puro	synthetic construct	Crystal structure of ASL-SufJ bound to Codon ACC-U on the Ribosome	X-ray diffraction	3.5	2015-05-13
26	4LFZ\|1\|Z8	tRNA acceptor end mimic	synthetic construct	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin	X-ray diffraction	3.92	2014-08-06
27	4P70\|1\|Z8	tRNA acceptor end mimic	synthetic construct	Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome	X-ray diffraction	3.68	2014-08-13
28	4LEL\|1\|Z8	tRNA acceptor end mimic	synthetic construct	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome	X-ray diffraction	3.9	2014-08-06
29	5LYB\|1\|a	aminoacyl-tRNA fragment ACCPmn	synthetic construct	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-ray diffraction	3.25	2016-11-23
30	4L71\|1\|Z8	tRNA acceptor end mimic	synthetic construct	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome	X-ray diffraction	3.9	2014-08-06
31	4L71\|1\|Z6	tRNA acceptor end mimic	synthetic construct	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome	X-ray diffraction	3.9	2014-08-06
32	4TUB\|1\|Z5	CC-Puro	synthetic construct	Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome	X-ray diffraction	3.6	2015-05-13
33	4TUA\|1\|Z6	CC-Puro	synthetic construct	Crystal structure of ASL-Thr bound to Codon ACC-A on the Ribosome	X-ray diffraction	3.6	2015-05-13
34	4TUC\|1\|Z6	CC-Puro	synthetic construct	Crystal structure of ASL-SufJ bound to Codon ACC-A on the Ribosome	X-ray diffraction	3.6	2015-05-13
35	6N9E\|1\|2w	CC-Pmn	Escherichia coli	Crystal structure of the Thermus thermophilus 70S ribosome in complex with a short substrate mimic CC-Pmn and bound to mRNA and P-site tRNA at 3.7A resolution	X-ray diffraction	3.7	2018-12-12
36	4TUC\|1\|Z5	CC-Puro	synthetic construct	Crystal structure of ASL-SufJ bound to Codon ACC-A on the Ribosome	X-ray diffraction	3.6	2015-05-13
37	4TUD\|1\|Z6	CC-Puro	synthetic construct	Crystal structure of ASL-SufJ bound to Codon ACC-C on the Ribosome	X-ray diffraction	3.6	2015-05-13
38	4TUE\|1\|Z5	CC-Puro	synthetic construct	Crystal structure of ASL-SufJ bound to Codon ACC-U on the Ribosome	X-ray diffraction	3.5	2015-05-13
39	4LSK\|1\|Z8	tRNA acceptor end mimic	synthetic construct	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome	X-ray diffraction	3.48	2014-08-06
40	4LEL\|1\|Z6	tRNA acceptor end mimic	synthetic construct	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome	X-ray diffraction	3.9	2014-08-06
41	4LSK\|1\|Z6	tRNA acceptor end mimic	synthetic construct	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome	X-ray diffraction	3.48	2014-08-06
42	4ZSN\|1\|Z7	CC-puromycin	synthetic construct	70S-wild-type HigB toxin complex bound to a AAA lysine codon	X-ray diffraction	3.6	2016-09-07
43	1VQO\|1\|4	5'-R(CPCP*(PPU))-3'		The structure of CCPMN bound to the large ribosomal subunit haloarcula marismortui	X-ray diffraction	2.2	2005-11-29
44	1M90\|1\|5	CCA		Co-crystal structure of CCA-Phe-caproic acid-biotin and sparsomycin bound to the 50S ribosomal subunit	X-ray diffraction	2.8	2002-09-06
45	1QVG\|1\|5	Oligonucleotide CCA		Structure of CCA oligonucleotide bound to the tRNA binding sites of the large ribosomal subunit of Haloarcula marismortui	X-ray diffraction	2.9	2003-11-11
46	3CXC\|1\|4	5'-R(CPCP*A)-3'		The structure of an enhanced oxazolidinone inhibitor bound to the 50S ribosomal subunit of H. marismortui	X-ray diffraction	3	2009-04-28
47	1Q7Y\|1\|5	CCdA-P-Puromycin		Crystal Structure of CCdAP-Puromycin bound at the Peptidyl transferase center of the 50S ribosomal subunit	X-ray diffraction	3.2	2003-10-07
48	1QVG\|1\|4	Oligonucleotide CCA		Structure of CCA oligonucleotide bound to the tRNA binding sites of the large ribosomal subunit of Haloarcula marismortui	X-ray diffraction	2.9	2003-11-11
49	1QVG\|1\|3	Oligonucleotide CCA		Structure of CCA oligonucleotide bound to the tRNA binding sites of the large ribosomal subunit of Haloarcula marismortui	X-ray diffraction	2.9	2003-11-11
50	1Q86\|1\|5	CCA-phenylalanine-cariotic-acid-biotin		Crystal structure of CCA-Phe-cap-biotin bound simultaneously at half occupancy to both the A-site and P-site of the the 50S ribosomal Subunit.	X-ray diffraction	3	2003-10-07
51	3CME\|1\|6	RNA (5'-R(CPCP*(8AN))-3')	synthetic construct	The Structure of CA and CCA-PHE-CAP-BIO Bound to the Large Ribosomal Subunit of Haloarcula Marismortui	X-ray diffraction	2.95	2008-09-23
52	1Q86\|1\|6	CCA-phenylalanine-cariotic-acid-biotin		Crystal structure of CCA-Phe-cap-biotin bound simultaneously at half occupancy to both the A-site and P-site of the the 50S ribosomal Subunit.	X-ray diffraction	3	2003-10-07
53	3CME\|1\|5	RNA (5'-R(CCP*A)-3')	synthetic construct	The Structure of CA and CCA-PHE-CAP-BIO Bound to the Large Ribosomal Subunit of Haloarcula Marismortui	X-ray diffraction	2.95	2008-09-23
54	7PWG\|1\|E	P-site tRNA	Giardia lamblia ATCC 50803	Cryo-EM structure of large subunit of Giardia lamblia ribosome at 2.7 A resolution	Electron microscopy	2.75	2022-04-20
55	7PWO\|1\|E	P-site tRNA	Giardia lamblia ATCC 50803	Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution	Electron microscopy	2.75	2022-04-20
56	7Y38\|1\|Z	RNA (5'-R(PCPCP*A)-3')	in vitro transcription vector pT7-TP(deltai)	Molecular architecture of the chikungunya virus replication complex	Electron microscopy	2.8	2022-12-14
57	8OIT\|1\|B7	E-site tRNA	Homo sapiens	39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA	Electron microscopy	2.9	2023-06-14
58	8IP8\|1\|dl	CCA end of E-tRNA	Triticum aestivum	Wheat 80S ribosome stalled on AUG-Stop boron dependently	Electron microscopy	2.9	2024-02-21
59	6S0K\|1\|2	tRNA-CCA	Escherichia coli	Ribosome nascent chain in complex with SecA	Electron microscopy	3.1	2019-10-09
60	8OIR\|1\|B7	E-site tRNA	Homo sapiens	55S human mitochondrial ribosome with mtRF1 and P-site tRNA	Electron microscopy	3.1	2023-06-14
61	6OTR\|1\|ZA	CCPuro	synthetic construct	Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)	X-ray diffraction	3.12	2019-08-21
62	6OTR\|1\|ZB	CCPuro	synthetic construct	Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)	X-ray diffraction	3.12	2019-08-21
63	5O60\|1\|2	tRNA CCA-end acetylated (Phe)	Mycolicibacterium smegmatis	Structure of the 50S large ribosomal subunit from Mycobacterium smegmatis	Electron microscopy	3.18	2017-07-12
64	5GAE\|1\|x	tRNA CCA end (5'-R(PCPCP*A)-3')	Escherichia coli	RNC in complex with a translocating SecYEG	Electron microscopy	3.33	2016-01-27
65	4V19\|1\|C	TRNA	Sus scrofa	Structure of the large subunit of the mammalian mitoribosome, part 1 of 2	Electron microscopy	3.4	2014-10-08
66	4V19\|1\|Z	TRNA	Sus scrofa	Structure of the large subunit of the mammalian mitoribosome, part 1 of 2	Electron microscopy	3.4	2014-10-08
67	5LZD\|1\|w	CCA 3' end of E-site tRNASec (low occupancy)	Escherichia coli	Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)	Electron microscopy	3.4	2016-11-23
68	6OXI\|1\|ZA	CCPuro	Streptomyces alboniger	Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (UAA)	X-ray diffraction	3.49	2019-08-21
69	8OIQ\|1\|B7	E-site tRNA	Sus scrofa	39S mammalian mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA	Electron microscopy	3.5	2023-06-14
70	5LZE\|1\|w	CCA 3' end of E-site tRNASec (low occupancy)	Escherichia coli	Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)	Electron microscopy	3.5	2016-11-23
71	8FOM\|1\|Z6	CC-puro	synthetic construct	Crystal structure of tRNA^Lys(SUU) bound to UAA codon in the ribosomal P site	X-ray diffraction	3.58	2023-03-29
72	8FOM\|1\|Z8	CC-puro	synthetic construct	Crystal structure of tRNA^Lys(SUU) bound to UAA codon in the ribosomal P site	X-ray diffraction	3.58	2023-03-29
73	8OIN\|1\|B7	E-site tRNA	Sus scrofa	55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA	Electron microscopy	3.6	2023-06-14
74	8FON\|1\|Z6	CC-puro	synthetic construct	Crystal structure of tRNA^Lys(SUU) bound to AUA codon in the ribosomal P site	X-ray diffraction	3.64	2023-03-29
75	8FON\|1\|Z8	CC-puro	synthetic construct	Crystal structure of tRNA^Lys(SUU) bound to AUA codon in the ribosomal P site	X-ray diffraction	3.64	2023-03-29
76	6NDK\|1\|ZB	tRNA acceptor end mimic	synthetic construct	Structure of ASLSufA6 A37.5 bound to the 70S A site	X-ray diffraction	3.64	2019-02-27
77	5GAD\|1\|2	tRNA CCAend	Escherichia coli	RNC-SRP-SR complex early state	Electron microscopy	3.7	2016-01-27
78	5GAH\|1\|2	tRNA CCAend	Escherichia coli	RNC in complex with SRP with detached NG domain	Electron microscopy	3.8	2016-01-27
79	5GAG\|1\|2	tRNA CCAend	Escherichia coli	RNC in complex with SRP-SR in the closed state	Electron microscopy	3.8	2016-01-27
80	3J7Z\|1\|7	P-tRNA CCA-end	Escherichia coli	Structure of the E. coli 50S subunit with ErmCL nascent chain	Electron microscopy	3.9	2014-10-22
81	6OXA\|1\|ZA	CCPuro	Streptomyces alboniger	Dimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU)	X-ray diffraction	3.25	2019-08-21
82	6OXA\|1\|ZB	CCPuro	Streptomyces alboniger	Dimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU)	X-ray diffraction	3.25	2019-08-21
83	5GAF\|1\|2	tRNA CCAend	Escherichia coli	RNC in complex with SRP	Electron microscopy	4.3	2016-02-03
84	6NDK\|1\|ZA	tRNA acceptor end mimic	synthetic construct	Structure of ASLSufA6 A37.5 bound to the 70S A site	X-ray diffraction	3.64	2019-02-27
85	5NCO\|1\|2	P-site tRNA-CCA end	Escherichia coli	Quaternary complex between SRP, SR, and SecYEG bound to the translating ribosome	Electron microscopy	4.8	2017-05-24
86	5LZC\|1\|w	CCA 3' end of E-site tRNASec (low occupancy)	Escherichia coli	Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the codon reading state (CR)	Electron microscopy	4.8	2016-11-23
87	6OXI\|1\|ZB	CCPuro	Streptomyces alboniger	Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (UAA)	X-ray diffraction	3.49	2019-08-21
88	5LZB\|1\|w	CCA 3' end of E-site tRNASec (low occupancy)	Escherichia coli	Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the initial binding state (IB)	Electron microscopy	5.3	2016-11-23
89	3J5L\|1\|7	5'-R(CPCP*A)-3'		Structure of the E. coli 50S subunit with ErmBL nascent chain	Electron microscopy	6.6	2014-03-26

Release history

Release	3.378
Date	2025-03-13

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#S	PDB	Title	Method	Resolution	Length
1	5LYB\|1\|a	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-RAY DIFFRACTION	3.25	3
2	5LYB\|1\|A	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-RAY DIFFRACTION	3.25	3
3	6N9E\|1\|2w	Crystal structure of the Thermus thermophilus 70S ribosome in complex with a short substrate mimic CC-Pmn and bound to mRNA and P-site tRNA at 3.7A resolution	X-RAY DIFFRACTION	3.7	2
4	7PWG\|1\|E	Cryo-EM structure of large subunit of Giardia lamblia ribosome at 2.7 A resolution	ELECTRON MICROSCOPY	2.75	3
5	7PWO\|1\|E	Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution	ELECTRON MICROSCOPY	2.75	3
6	1VVJ\|1\|Z6	Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome	X-RAY DIFFRACTION	3.44	3
7	4L47\|1\|Z6	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the Ribosome	X-RAY DIFFRACTION	3.22	3
8	4LSK\|1\|Z6	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome	X-RAY DIFFRACTION	3.48	3
9	6OTR\|1\|ZB	Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)	X-RAY DIFFRACTION	3.12	3
10	6OXA\|1\|ZA	Dimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU)	X-RAY DIFFRACTION	3.25	3
11	6OXI\|1\|ZB	Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (UAA)	X-RAY DIFFRACTION	3.49	3
12	4LEL\|1\|Z6	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome	X-RAY DIFFRACTION	3.9	3
13	4LNT\|1\|Z8	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-RAY DIFFRACTION	2.94	3
14	4TUA\|1\|Z5	Crystal structure of ASL-Thr bound to Codon ACC-A on the Ribosome	X-RAY DIFFRACTION	3.6	3
15	4TUE\|1\|Z6	Crystal structure of ASL-SufJ bound to Codon ACC-U on the Ribosome	X-RAY DIFFRACTION	3.5	3
16	4L47\|1\|Z8	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the Ribosome	X-RAY DIFFRACTION	3.22	3
17	4TUB\|1\|Z6	Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome	X-RAY DIFFRACTION	3.6	3
18	6OXA\|1\|ZB	Dimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU)	X-RAY DIFFRACTION	3.25	3
19	6OTR\|1\|ZA	Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)	X-RAY DIFFRACTION	3.12	3
20	4LFZ\|1\|Z6	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin	X-RAY DIFFRACTION	3.92	3
21	6OXI\|1\|ZA	Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (UAA)	X-RAY DIFFRACTION	3.49	3
22	4YZV\|1\|Z7	Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codon	X-RAY DIFFRACTION	3.1	3
23	4ZSN\|1\|Z7	70S-wild-type HigB toxin complex bound to a AAA lysine codon	X-RAY DIFFRACTION	3.6	3
24	4TUD\|1\|Z5	Crystal structure of ASL-SufJ bound to Codon ACC-C on the Ribosome	X-RAY DIFFRACTION	3.6	3
25	4LNT\|1\|Z6	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-RAY DIFFRACTION	2.94	3
26	4LT8\|1\|Z6	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome	X-RAY DIFFRACTION	3.14	3
27	4L71\|1\|Z6	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome	X-RAY DIFFRACTION	3.9	3
28	4LEL\|1\|Z8	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome	X-RAY DIFFRACTION	3.9	3
29	8FON\|1\|Z6	Crystal structure of tRNA^Lys(SUU) bound to AUA codon in the ribosomal P site	X-RAY DIFFRACTION	3.64	3
30	4TUE\|1\|Z5	Crystal structure of ASL-SufJ bound to Codon ACC-U on the Ribosome	X-RAY DIFFRACTION	3.5	3
31	6N9E\|1\|1w	Crystal structure of the Thermus thermophilus 70S ribosome in complex with a short substrate mimic CC-Pmn and bound to mRNA and P-site tRNA at 3.7A resolution	X-RAY DIFFRACTION	3.7	3
32	4TUB\|1\|Z5	Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome	X-RAY DIFFRACTION	3.6	3
33	4TUC\|1\|Z6	Crystal structure of ASL-SufJ bound to Codon ACC-A on the Ribosome	X-RAY DIFFRACTION	3.6	3
34	4TUC\|1\|Z5	Crystal structure of ASL-SufJ bound to Codon ACC-A on the Ribosome	X-RAY DIFFRACTION	3.6	3
35	6NDK\|1\|ZB	Structure of ASLSufA6 A37.5 bound to the 70S A site	X-RAY DIFFRACTION	3.64	3
36	4P70\|1\|Z8	Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome	X-RAY DIFFRACTION	3.68	3
37	8FON\|1\|Z8	Crystal structure of tRNA^Lys(SUU) bound to AUA codon in the ribosomal P site	X-RAY DIFFRACTION	3.64	3
38	6NDK\|1\|ZA	Structure of ASLSufA6 A37.5 bound to the 70S A site	X-RAY DIFFRACTION	3.64	3
39	4YZV\|1\|Z6	Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codon	X-RAY DIFFRACTION	3.1	3
40	4ZSN\|1\|Z6	70S-wild-type HigB toxin complex bound to a AAA lysine codon	X-RAY DIFFRACTION	3.6	3
41	4LT8\|1\|Z8	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome	X-RAY DIFFRACTION	3.14	3
42	1VVJ\|1\|Z8	Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome	X-RAY DIFFRACTION	3.44	3
43	4TUA\|1\|Z6	Crystal structure of ASL-Thr bound to Codon ACC-A on the Ribosome	X-RAY DIFFRACTION	3.6	3
44	8FOM\|1\|Z8	Crystal structure of tRNA^Lys(SUU) bound to UAA codon in the ribosomal P site	X-RAY DIFFRACTION	3.58	3
45	4LFZ\|1\|Z8	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin	X-RAY DIFFRACTION	3.92	3
46	4LSK\|1\|Z8	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome	X-RAY DIFFRACTION	3.48	3
47	8FOM\|1\|Z6	Crystal structure of tRNA^Lys(SUU) bound to UAA codon in the ribosomal P site	X-RAY DIFFRACTION	3.58	3
48	4P70\|1\|Z6	Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome	X-RAY DIFFRACTION	3.68	3
49	4TUD\|1\|Z6	Crystal structure of ASL-SufJ bound to Codon ACC-C on the Ribosome	X-RAY DIFFRACTION	3.6	3
50	4L71\|1\|Z8	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome	X-RAY DIFFRACTION	3.9	3
51	1VY7\|1\|CW	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.8	3
52	1VY7\|1\|AW	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.8	3
53	3CME\|1\|5	The Structure of CA and CCA-PHE-CAP-BIO Bound to the Large Ribosomal Subunit of Haloarcula Marismortui	X-RAY DIFFRACTION	2.95	2
54	1VQO\|1\|4	The structure of CCPMN bound to the large ribosomal subunit haloarcula marismortui	X-RAY DIFFRACTION	2.2	2
55	1QVG\|1\|5	Structure of CCA oligonucleotide bound to the tRNA binding sites of the large ribosomal subunit of Haloarcula marismortui	X-RAY DIFFRACTION	2.9	3
56	3CMA\|1\|5	The structure of CCA and CCA-Phe-Cap-Bio bound to the large ribosomal subunit of Haloarcula marismortui	X-RAY DIFFRACTION	2.8	3
57	3CD6\|1\|4	Co-cystal of large Ribosomal Subunit mutant G2616A with CC-Puromycin	X-RAY DIFFRACTION	2.75	2
58	1Q86\|1\|5	Crystal structure of CCA-Phe-cap-biotin bound simultaneously at half occupancy to both the A-site and P-site of the the 50S ribosomal Subunit.	X-RAY DIFFRACTION	3	3
59	4V19\|1\|Z	Structure of the large subunit of the mammalian mitoribosome, part 1 of 2	ELECTRON MICROSCOPY	3.4	3
60	3CME\|1\|6	The Structure of CA and CCA-PHE-CAP-BIO Bound to the Large Ribosomal Subunit of Haloarcula Marismortui	X-RAY DIFFRACTION	2.95	3
61	3CMA\|1\|6	The structure of CCA and CCA-Phe-Cap-Bio bound to the large ribosomal subunit of Haloarcula marismortui	X-RAY DIFFRACTION	2.8	3
62	5GAE\|1\|x	RNC in complex with a translocating SecYEG	ELECTRON MICROSCOPY	3.33	3
63	1QVG\|1\|4	Structure of CCA oligonucleotide bound to the tRNA binding sites of the large ribosomal subunit of Haloarcula marismortui	X-RAY DIFFRACTION	2.9	3
64	4V19\|1\|C	Structure of the large subunit of the mammalian mitoribosome, part 1 of 2	ELECTRON MICROSCOPY	3.4	3
65	1M90\|1\|5	Co-crystal structure of CCA-Phe-caproic acid-biotin and sparsomycin bound to the 50S ribosomal subunit	X-RAY DIFFRACTION	2.8	3
66	1Q86\|1\|6	Crystal structure of CCA-Phe-cap-biotin bound simultaneously at half occupancy to both the A-site and P-site of the the 50S ribosomal Subunit.	X-RAY DIFFRACTION	3	3
67	3J5L\|1\|7	Structure of the E. coli 50S subunit with ErmBL nascent chain	ELECTRON MICROSCOPY	6.6	3
68	3CXC\|1\|4	The structure of an enhanced oxazolidinone inhibitor bound to the 50S ribosomal subunit of H. marismortui	X-RAY DIFFRACTION	3	3
69	1KQS\|1\|3	The Haloarcula marismortui 50S Complexed with a Pretranslocational Intermediate in Protein Synthesis	X-RAY DIFFRACTION	3.1	3
70	3J7Z\|1\|7	Structure of the E. coli 50S subunit with ErmCL nascent chain	ELECTRON MICROSCOPY	3.9	3
71	7Y38\|1\|Z	Molecular architecture of the chikungunya virus replication complex	ELECTRON MICROSCOPY	2.8	3
72	6S0K\|1\|2	Ribosome nascent chain in complex with SecA	ELECTRON MICROSCOPY	3.1	3
73	5O60\|1\|2	Structure of the 50S large ribosomal subunit from Mycobacterium smegmatis	ELECTRON MICROSCOPY	3.18	3
74	5GAG\|1\|2	RNC in complex with SRP-SR in the closed state	ELECTRON MICROSCOPY	3.8	3
75	5NCO\|1\|2	Quaternary complex between SRP, SR, and SecYEG bound to the translating ribosome	ELECTRON MICROSCOPY	4.8	3
76	5GAF\|1\|2	RNC in complex with SRP	ELECTRON MICROSCOPY	4.3	3
77	5GAD\|1\|2	RNC-SRP-SR complex early state	ELECTRON MICROSCOPY	3.7	3
78	5GAH\|1\|2	RNC in complex with SRP with detached NG domain	ELECTRON MICROSCOPY	3.8	3
79	1Q7Y\|1\|5	Crystal Structure of CCdAP-Puromycin bound at the Peptidyl transferase center of the 50S ribosomal subunit	X-RAY DIFFRACTION	3.2	3
80	8OIR\|1\|B7	55S human mitochondrial ribosome with mtRF1 and P-site tRNA	ELECTRON MICROSCOPY	3.1	3
81	8OIT\|1\|B7	39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA	ELECTRON MICROSCOPY	2.9	3
82	8OIQ\|1\|B7	39S mammalian mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA	ELECTRON MICROSCOPY	3.5	3
83	8OIN\|1\|B7	55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA	ELECTRON MICROSCOPY	3.6	3
84	8IP8\|1\|dl	Wheat 80S ribosome stalled on AUG-Stop boron dependently	ELECTRON MICROSCOPY	2.9	3
85	1QVG\|1\|3	Structure of CCA oligonucleotide bound to the tRNA binding sites of the large ribosomal subunit of Haloarcula marismortui	X-RAY DIFFRACTION	2.9	3
86	5LZB\|1\|w	Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the initial binding state (IB)	ELECTRON MICROSCOPY	5.3	3
87	5LZC\|1\|w	Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the codon reading state (CR)	ELECTRON MICROSCOPY	4.8	3
88	5LZD\|1\|w	Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)	ELECTRON MICROSCOPY	3.4	3
89	5LZE\|1\|w	Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)	ELECTRON MICROSCOPY	3.5	3

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

Coloring options: Nucleotide numbers

Equivalence class NR_all_95119.1 Current

Release history

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