6Y6X Summary
- Structure Title
- 6y6x Summary
- Authors
- Release Date
- 2020-07-08
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
- Chains
-
- 3 RNA chains from Homo sapiens
- 43 other chains
- Compounds
- 28S ribosomal RNA, 5S ribosomal RNA, 5.8S ribosomal RNA, 60S ribosomal protein L8, 60S ribosomal protein L3, 60S ribosomal protein L4, 60S ribosomal protein L5, 60S ribosomal protein L6, 60S ribosomal protein L7, 60S ribosomal protein L7a, 60S ribosomal protein L9, 60S ribosomal protein L10-like, 60S ribosomal protein L11, 60S ribosomal protein L13, 60S ribosomal protein L14, 60S ribosomal protein L15, 60S ribosomal protein L13a, 60S ribosomal protein L17, 60S ribosomal protein L18, 60S ribosomal protein L19, 60S ribosomal protein L18a, 60S ribosomal protein L21, 60S ribosomal protein L22, 60S ribosomal protein L23, 60S ribosomal protein L24, 60S ribosomal protein L23a, 60S ribosomal protein L26, 60S ribosomal protein L27, 60S ribosomal protein L27a, 60S ribosomal protein L29, 60S ribosomal protein L30, 60S ribosomal protein L31, 60S ribosomal protein L32, 60S ribosomal protein L35a, 60S ribosomal protein L34, 60S ribosomal protein L35, 60S ribosomal protein L36, 60S ribosomal protein L37, 60S ribosomal protein L38, 60S ribosomal protein L39, Ubiquitin-60S ribosomal protein L40, 60S ribosomal protein L41, 60S ribosomal protein L36a, 60S ribosomal protein L37a, 60S ribosomal protein L28, 60S ribosomal protein L10a
Pairwise Interactions
Interactions annotated by FR3D:- 1,515 base-pairs
- 3,998 base-stacking
- 83 base-phosphate
- 92 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 6y6x contains:- 81 hairpin loops from 0 motif groups
- 181 internal loops from 0 motif groups
- 16 junction loops from 0 motif groups
3D Redundancy
6y6x has chains which belong to the following equivalence classes in the current representative set:- NR_all_65061.32 (1)
- NR_all_52752.28 (1)
- NR_4.0_65061.32 (1)
- NR_4.0_52752.28 (1)
- NR_3.5_65061.32 (1)
- NR_3.5_52752.28 (1)
- NR_3.0_65061.32 (1)
- NR_3.0_52752.28 (1)
- NR_20.0_65061.32 (1)
- NR_20.0_52752.28 (1)
Similar structures
8GLP 8QOI 8YOO 8A3D 8YOP 8XSX 8K2C 8G5Y 8JDK 7XNY 6ZMI 8IFE 8IFD 7OW7 8QFD 8JDL 6ZM7 8G60 7XNX 8JDJ 8G5Z 7F5S 8FL3 6Z6N 8FLE 8FLB 8JDM 8FL7 8G6J 9GMO 6QZP 6ZME 6Z6L 8XSY 7QVP 8FLD 8FL6 8FLA 8FL2 7QVP 8IDT 8UKB 6XA1 6ZMO 6Z6M 8FLF 8G61 8OJ5 8INF 8IDY 8FL9 8FLC 6OLE 6OM0 6Y2L 8FL4 8XSZ 8OHD 6LQM 6Y0G 8Y0X 9G8M 7BHP 6LU8 6LSR 8INE 8INK 8IPY 8IPD 8Y0W 8OJ8 6LSS 8OJ0 8IE3 8FKY 6OLI 6OLG 8FKW 8IR1 8FKV 8IR3 6Y57 8FKX 5T2C 8FKZ 6OM7 4UG0 6OLF 6W6L 8FKU 8FKT 6IP5 6IP8 6OLZ 5AJ0 8FKS 8FKR 8FKQ 8FKP 8IPX 8FL0 5LKS 6IP6 4V6X 8ONY 6SXO 7ZFW 5A8LStructures from NR_all_65061.32