Motif HL_01226.2 Version HL_01226.2 of this group appears in releases 3.88 to 3.88
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | 2-6 | 3-6 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_7A0S_021 | 7A0S | 0.0000 | 1 | X | LSU rRNA | C | 651 | C | 652 | G | 653 | A | 655 | U | 656 | A | 657 | G | 658 | cWW | ncWW | |
| 2 | HL_8C3A_069 | 8C3A | 0.6318 | 1 | 1 | LSU rRNA | C | 3160 | U | 3161 | U | 3162 | U | 3164 | U | 3165 | A | 3166 | G | 3167 | cWW | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CCGAAUAG | 1 |
| CUUUUUAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CGAAUA | 1 |
| UUUUUA | 1 |
Release history
| Release | 3.88 |
|---|---|
| Date | 2024-09-11 |
| Status | Updated, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-F-F-F
- Heat map statistics
- Min 0.63 | Avg 0.32 | Max 0.63
Coloring options: