Motif IL_33886.1 Version IL_33886.1 of this group appears in releases 3.88 to 3.98
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | 1-11 | 4-9 | 5-8 | 5-10 | 6-7 | 8-10 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1NTA_006 | 1NTA | 0.0000 | 1 | Kink-turn with embedded cWW pair | B+A | A | 105 | C | 106 | C | 107 | A | 108 | G | 110 | G | 111 | * | C | 15 | U | 16 | U | 17 | C | 18 | U | 19 | cWW | ntHW | cWW | cWW | ncSH | |
| 2 | IL_4V9F_108 | 4V9F | 0.6313 | 1 | Kink-turn with embedded cWW pair | 0 | C | 260 | A | 261 | A | 262 | G | 264 | U | 265 | G | 266 | * | C | 245 | G | 246 | A | 247 | A | 248 | G | 249 | cWW | tSH | tHS | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| ACCACGG*CUUCU | 1 |
| CAAUGUG*CGAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CCACG*UUC | 1 |
| AAUGU*GAA | 1 |
Release history
| Release | 3.88 | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 | 3.98 |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-09-11 | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 | 2025-04-23 | 2025-05-21 | 2025-06-18 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Kink-turn with embedded cWW pair (2)
- Basepair signature
- cWW-L-cWW-L-R-L-R-cWW
- Heat map statistics
- Min 0.63 | Avg 0.32 | Max 0.63
Coloring options: