Internal Loop Motif Atlas Release 3.88

#	Motif	Core Nts	Instances
1	IL_64928.1 View exemplar Basepair signature: cWW-cWW-cWW History status: New id, > 2 parents Isolated non-canonical cWW pair (258) Isolated near basepair (4) Isolated tWW contact (1)	6	263
2	IL_37497.8 View exemplar Basepair signature: cWW-L-cWW History status: Updated, 2 parents Single bulged A (119) Major groove intercalation (6)	5	125
3	IL_83039.18 View exemplar Basepair signature: cWW-L-cWW History status: Updated, 1 parent Single bulged U (119) Major groove intercalation (3)	5	122
4	IL_00225.5 View exemplar Basepair signature: cWW-L-cWW History status: Updated, 1 parent Single bulged G (44) Major groove intercalation (2) Stack outside cWW (1)	5	47
5	IL_61258.13 View exemplar Basepair signature: cWW-L-cWW History status: Exact match Single bulged C (39) Major groove intercalation (1)	5	40
6	IL_27635.5 View exemplar Basepair signature: cWW-cSH-cWW History status: Updated, 1 parent Major groove platform (38)	5	38
7	IL_09705.12 View exemplar Basepair signature: cWW-tSH-tHS-cWW History status: Updated, 1 parent Double sheared (32) Double sheared; A in syn (3)	8	35
8	IL_66171.1 View exemplar Basepair signature: cWW-cHW-cWW History status: New id, 2 parents Isolated cWH basepair (31) Isolated non-canonical cWW pair (1)	6	32
9	IL_70923.4 View exemplar Basepair signature: cWW-tSS-tSH-L-tHS-tHS-cWW History status: Updated, 1 parent Kink-turn (31)	12	31
10	IL_42622.6 View exemplar Basepair signature: cWW-cSH-cWW History status: Updated, 1 parent Minor groove platform (27)	5	27
11	IL_50694.3 View exemplar Basepair signature: cWW-tSH-cWW-L History status: Exact match Major groove platform; stack outside cWW (27)	6	27
12	IL_92880.1 View exemplar Basepair signature: cWW-cWW History status: New id, 1 parent Multiple bulged bases (10) Major groove intercalation (10) Stack outside cWW (4)	4	24
13	IL_17136.3 View exemplar Basepair signature: cWW-tSH-tHW-tHS-cWW History status: Updated, 2 parents tSH-tHW-tHS (15) AAA cross-strand stack (4) UAA/GAN related (2) UAA/GAN variation (1)	10	23
14	IL_11389.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, 2 parents Single stack bend (14) Single stack bend with SAM intercalation (2) Single base bend (1)	5	22
15	IL_73915.1 View exemplar Basepair signature: cWW-L-R-cWW-cWW History status: New id, 1 parent Tandem non-canonical cWW pairs (19)	8	21
16	IL_67809.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, 1 parent Single stack bend (20) Not an internal loop (1)	5	21
17	IL_86432.1 View exemplar Basepair signature: cWW-cWW-cWW-cWW History status: New id, 1 parent Tandem non-canonical cWW pairs (21)	8	21
18	IL_32955.1 View exemplar Basepair signature: cWW-cWW-cWW-cWW History status: New id, 2 parents Tandem non-canonical cWW pairs (18)	8	20
19	IL_59677.4 View exemplar Basepair signature: cWW-cWW History status: Updated, 2 parents Multiple bulged bases (11) Bulged stacked bases (5)	4	20
20	IL_89002.3 View exemplar Basepair signature: cWW-tWH-R-L-tHS-cWW History status: Exact match UAA/GAN (19) UAA/GAN with extra stack (1)	9	20
21	IL_27267.1 View exemplar Basepair signature: cWW-L-R-cWW History status: New id, 2 parents Isolated non-canonical cWW pair (13) Isolated cWH basepair (5) Other IL (1)	6	19
22	IL_99483.1 View exemplar Basepair signature: cWW-cWW History status: New id, 2 parents Major groove intercalation (7) Multiple bulged bases (6)		17
23	IL_64417.3 View exemplar Basepair signature: cWW-L-cWW History status: Updated, 2 parents Decoding loop related (12)		17
24	IL_24807.1 View exemplar Basepair signature: cWW-cWW History status: New id, > 2 parents Multiple bulged bases (9) Bulged stacked bases (1)	4	17
25	IL_09061.10 View exemplar Basepair signature: cWW-cWS-cSH-cWW History status: Updated, 1 parent Major groove minor groove platform; mini C-loop (16)	6	16
26	IL_63596.8 View exemplar Basepair signature: cWW-cWS-cSH-tWH-cWW-L History status: Updated, 1 parent C-loop (14) C-loop with bulged stacked A's (1)	7	15
27	IL_04346.8 View exemplar Basepair signature: cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW History status: Exact match 8x7 Sarcin-Ricin; G-bulge (15)	15	15
28	IL_80097.3 View exemplar Basepair signature: cWW-tHS-cWW History status: Updated, 2 parents Minor groove platform (11) Minor groove platform related (2) Not an internal loop (1) Single bulged A (1)	5	15
29	IL_45067.4 View exemplar Basepair signature: cWW-tSS-tSH-L-R-R-L-cWW-L History status: Updated, 1 parent Kink-turn (8) Kink-turn with non-sequential stacking (6)	12	14
30	IL_12554.1 View exemplar Basepair signature: cWW-cWW-cWW History status: New id, 1 parent Isolated non-canonical cWW pair (12)	6	14
31	IL_95716.1 View exemplar Basepair signature: cWW-tSH-tHS-tHS-cWW History status: New id, 2 parents Triple sheared (14)	10	14
32	IL_74602.1 View exemplar Basepair signature: cWW-cWW-cWW History status: New id, > 2 parents Isolated non-canonical cWW pair (11)	6	14
33	IL_93341.2 View exemplar Basepair signature: cWW-L-R-cSH-cSH-cWW History status: Updated, 1 parent 8-nt loop receptor (5)	8	13
34	IL_05564.4 View exemplar Basepair signature: cWW-cSH-cWW-cWW History status: Updated, 1 parent Major groove platform with extra cWW (11)	7	13
35	IL_45612.5 View exemplar Basepair signature: cWW-L-R-L-cWW-L History status: Updated, 1 parent	8	13
36	IL_04059.2 View exemplar Basepair signature: cWW-tWH-tHS-cWW History status: Exact match tSH-tHW (9) Other IL (1)	8	13
37	IL_71110.2 View exemplar Basepair signature: cWW-cWW-cWW-cWW History status: Updated, 2 parents Tandem non-canonical cWW pairs (8)	8	13
38	IL_68582.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, > 2 parents Intercalated tWH (5) Stack and bulge (2) Intercalated cWW (2) Decoding loop related (1) Other IL (1)	5	13
39	IL_54650.1 View exemplar Basepair signature: cWW-cWW-cWW History status: New id, 2 parents Isolated non-canonical cWW with bulges (6) Isolated non-canonical cWW pair (2)	6	12
40	IL_95601.5 View exemplar Basepair signature: cWW-L-cWW History status: Updated, 1 parent Major groove platform with intercalation (6) Minor groove platform (1) Major groove minor groove platform; mini C-loop (1) Major groove platform (1)		11
41	IL_64231.1 View exemplar Basepair signature: cWW-cWW-L-R-L-cWW History status: New id, > 2 parents Minor groove platform related (3) Tandem non-canonical cWW pairs (2) Decoding loop related (1) UAA/GAN related (1) Multiple bulged bases with non-canonical cWW (1)		11
42	IL_27844.3 View exemplar Basepair signature: cWW-L-R-cWW History status: Updated, 1 parent Isolated non-canonical cWW pair (2) Other IL (2) Decoding loop related (1) Decoding loop with one bulged A (1)	6	11
43	IL_53448.1 View exemplar Basepair signature: cWW-tWH-cSH-cWW History status: Exact match Receptor of 11-nt loop-receptor motif (11)	8	11
44	IL_88739.4 View exemplar Basepair signature: cWW-L-cWW History status: Exact match Minor groove platform, major groove intercalation (4) Major groove intercalation (2) Major groove minor groove platform; mini C-loop (1)	5	11
45	IL_66578.1 View exemplar Basepair signature: cWW-cWW History status: New id, 2 parents Stack outside cWW (6) Multiple bulged bases (3) Major groove intercalation (1)	4	11
46	IL_69229.1 View exemplar Basepair signature: cWW-tSS-tSH-L-tHS-cWW-cWW History status: New id, 1 parent Kink-turn (11)	12	11
47	IL_56185.1 View exemplar Basepair signature: cWW-cWW-cWW History status: New id, 2 parents Isolated non-canonical cWW pair (8) Other IL (1)	6	10
48	IL_76223.4 View exemplar Basepair signature: cWW-cHH-cWW History status: Updated, 1 parent Major groove platform (10)	5	10
49	IL_47499.1 View exemplar Basepair signature: cWW-L-cWW-cWW History status: New id, 1 parent Major groove minor groove platform with extra cWW (9)	7	10
50	IL_38958.9 View exemplar Basepair signature: cWW-tHS-cWW History status: Updated, 1 parent Isolated tHS basepair with bulges (7)		10
51	IL_35199.1 View exemplar Basepair signature: cWW-L-R-cWW-cWW History status: New id, 2 parents Tandem non-canonical cWW pairs (6)	8	9
52	IL_08257.1 View exemplar Basepair signature: cWW-L-R-tSH-tHS-cWW History status: New id, 2 parents Triple sheared (5) Double sheared with non-canonical cWW (3) Double sheared with near cWW (1)	10	9
53	IL_51265.2 View exemplar Basepair signature: cWW-tSS-tSH-L-tHS-cWW History status: Exact match Kink-turn from U4 (5) Kink-turn (3) Kink-turn from T-box riboswitch (1)		9
54	IL_77691.2 View exemplar Basepair signature: cWW-tSH-tHS-L-cWW History status: Exact match UAA/GAN related (5) UAA/GAN variation (1)		9
55	IL_76042.3 View exemplar Basepair signature: cWW-tSH-tHH-cSH-tWH-tHS-cWW History status: Exact match 7x6 Sarcin-Ricin; G-bulge (6) Sarcin-Ricin target in LSU H95; G-bulge (1)	13	9
56	IL_85666.1 View exemplar Basepair signature: cWW-cWW History status: New id, > 2 parents Multiple bulged bases (5) Minor groove platform (1) Major groove intercalation (1) Single bulged A (1) Other IL (1)	4	9
57	IL_44546.2 View exemplar Basepair signature: cWW-cWW History status: Exact match Multiple bulged bases (6) Bulged stacked bases (1)	4	9
58	IL_58103.8 View exemplar Basepair signature: cWW-cSH-cWS-L-tSW-cWW History status: Updated, 1 parent Symmetric double minor groove platform (5) Minor groove platform (1)	8	9
59	IL_73554.1 View exemplar Basepair signature: cWW-cWS-cWW History status: New id, 1 parent Isolated cWS basepair (5)	6	9
60	IL_19389.6 View exemplar Basepair signature: cWW-L-cWW-cSH History status: Exact match Major groove platform with intercalated tWH (5) Other IL (1)	6	9
61	IL_32711.1 View exemplar Basepair signature: cWW-cWW-cWW-cWW-cWW History status: New id, 1 parent Triple non-canonical cWW pairs (8) Partly complementary (1)	10	9
62	IL_67767.1 View exemplar Basepair signature: cWW-tWH-cWW-cSH-cWW History status: New id, 1 parent Receptor of 11-nt loop-receptor motif (8)	9	8
63	IL_75255.1 View exemplar Basepair signature: cWW-cSH-cWS-cSH-tWH-cWW History status: Exact match C-loop (8)	7	8
64	IL_93820.1 View exemplar Basepair signature: cWW-L-R-tSH-tHS-cWW History status: New id, 1 parent Double sheared with non-canonical cWW (5) Triple sheared (1)	10	8
65	IL_21175.1 View exemplar Basepair signature: cWW-cWW-cWW History status: New id, 2 parents Isolated non-canonical cWW with bulges (5) Isolated non-canonical cWW pair (1) Isolated basepair with bulged bases (1)	6	8
66	IL_07235.3 View exemplar Basepair signature: cWW-tSH-L-tHS-cWW History status: Updated, 1 parent UAA/GAN variation (6)	9	8
67	IL_54997.8 View exemplar Basepair signature: cWW-tWW-cWW History status: Exact match Isolated tWW turn (5)	6	8
68	IL_48100.3 View exemplar Basepair signature: cWW-L-cWW History status: Updated, 1 parent 180 degree turn (1)		8
69	IL_15052.1 View exemplar Basepair signature: cWW-cSH-cWS-cWW History status: Exact match Minor groove platform (7)		7
70	IL_33104.1 View exemplar Basepair signature: cWW-L-R-cWW History status: New id, 2 parents Isolated non-canonical cWW contact (3) Isolated near basepair (2) Isolated non-canonical cWW pair (1)	6	7
71	IL_17470.7 View exemplar Basepair signature: cWW-tWW-L-R-tWH-L-cWW History status: Exact match tHW-tHW cross-strand stack (5)	11	7
72	IL_38186.2 View exemplar Basepair signature: cWW-cWW History status: Updated, 1 parent Major groove intercalation (2)	4	7
73	IL_22854.1 View exemplar Basepair signature: cWW-tSH-cWW-tHW-cWW-L-L-R-L History status: New id, no parents		7
74	IL_56455.5 View exemplar Basepair signature: cWW-tSH-tHW-L-R-L-R-L-R-tWH-tHS-cWW History status: Updated, 1 parent Bacterial 5S Loop E (7)	18	7
75	IL_15261.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-cSH History status: New id, 1 parent SSU/LSU pseudoknot (7)	10	7
76	IL_65969.4 View exemplar Basepair signature: cWW-tSH-L-R-tHH-tHS-cWW History status: Updated, 1 parent tSH-tSH-tHH-tHS (5)	12	7
77	IL_36718.1 View exemplar Basepair signature: cWW-cWH-cWW History status: New id, 1 parent Isolated cWH basepair (5) cWH basepair with bulged bases (1)	6	7
78	IL_59477.1 View exemplar Basepair signature: cWW-L-cWS-cWW History status: New id, 2 parents Other IL (1)	7	7
79	IL_30659.1 View exemplar Basepair signature: cWW-L-cWW-cWW History status: New id, 2 parents Minor groove platform with extra cWW (1)	7	7
80	IL_66414.7 View exemplar Basepair signature: cWW-L-R-tSH-tSH-tHS-cWW-cWW History status: Exact match Triple sheared with non-canonical cWW (7)	14	7
81	IL_16458.2 View exemplar Basepair signature: cWW-L-R-L-R-cSH-tWH-tHS-cWW History status: Exact match Sarcin-Ricin target in LSU H95; G-bulge (4) 7x6 Sarcin-Ricin with UU cWW pair; G-bulge (1) 8x6 Sarcin-Ricin with inserted A; G-bulge (1) 7x6 Sarcin-Ricin; G-bulge (1)	13	7
82	IL_25186.2 View exemplar Basepair signature: cWW-L-R-L-R-cWW-cWW History status: Updated, 1 parent	10	7
83	IL_58179.1 View exemplar Basepair signature: cWW-cWW-cWW-cWW History status: New id, 2 parents Tandem non-canonical cWW pairs (6)	8	7
84	IL_37712.2 View exemplar Basepair signature: cWW-L-cWW-L-L History status: Exact match C-loop (4) Major groove minor groove platform with tHH (3)		7
85	IL_60992.7 View exemplar Basepair signature: cWW-cWS-tSH-L-tHH-tWH-cWW-tSS-tSH-L-L History status: Exact match	16	6
86	IL_63450.4 View exemplar Basepair signature: cWW-cWW-cSH-cWW History status: Updated, 1 parent Major groove platform with extra pair (2)	7	6
87	IL_22491.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: New id, 2 parents	7	6
88	IL_47078.2 View exemplar Basepair signature: cWW-cWS-L-cWW-L History status: Updated, 1 parent Minor groove platform (5)	7	6
89	IL_36388.1 View exemplar Basepair signature: cWW-tHS-cWW History status: New id, 1 parent Minor groove platform (5)	5	6
90	IL_90538.5 View exemplar Basepair signature: cWW-tSS-tSS-tSH-L-tHS-R-cWW-L-L History status: Exact match Kink-turn (6)	13	6
91	IL_20089.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, 2 parents Single stack bend (2) Multiple bulged bases (1)	5	6
92	IL_90991.8 View exemplar Basepair signature: cWW-cWW History status: Updated, 1 parent Multiple bulged bases (4)	4	6
93	IL_54678.6 View exemplar Basepair signature: cWW-cWW History status: Updated, 2 parents Other IL (1) Major groove platform with intercalation (1)		6
94	IL_71241.1 View exemplar Basepair signature: cWW-tSH-L-cWW-L History status: New id, 2 parents Isolated tHS basepair with bulges (3)	8	6
95	IL_04650.1 View exemplar Basepair signature: cWW-cSH-cWW-L-L-R-L History status: Exact match Minor groove platform (2)		6
96	IL_69145.2 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Updated, 2 parents Pseudoknot (3)	7	6
97	IL_49767.7 View exemplar Basepair signature: cWW-cWW-tWH-L-tHS-cWW History status: Updated, 1 parent UAA/GAN with extra cWW (5)	11	6
98	IL_02509.2 View exemplar Basepair signature: cWW-tSW-cWS-cSH-tWH-R-R-cWW History status: Exact match C-loop (3) C-loop with bulged stacked A's (1)		5
99	IL_76636.1 View exemplar Basepair signature: cWW-L-R-cWW History status: New id, 1 parent Isolated non-canonical cWW contact (5)	6	5
100	IL_65510.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L History status: Exact match	9	5
101	IL_37842.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-cWW History status: New id, 2 parents Triple sheared related (2)		5
102	IL_12566.3 View exemplar Basepair signature: cWW-L-tHS-L-cWW-L History status: Exact match	9	5
103	IL_59221.1 View exemplar Basepair signature: cWW-L-cSW-cWW History status: New id, 2 parents Other IL (1)	7	5
104	IL_65718.1 View exemplar Basepair signature: cWW-cSH-cWS-cWW-cWW History status: New id, 1 parent	9	5
105	IL_54177.1 View exemplar Basepair signature: cWW-cSW-tWH-L-R-L-R-tHS-cWW History status: New id, 1 parent Kink-turn related (5)	13	5
106	IL_61438.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, 1 parent	5	5
107	IL_57188.4 View exemplar Basepair signature: cWW-cSH-tWW-L-tWW-cWW-cSH History status: Exact match Kink-turn related (5)	11	5
108	IL_51880.1 View exemplar Basepair signature: cWW-tSS-tSH-L-R-R-L-cWW-L History status: New id, 2 parents Kink-turn (5)	12	5
109	IL_47263.2 View exemplar Basepair signature: cWW-tSH-cSH-cWW History status: Exact match Major groove platform with extra pair (5)	7	5
110	IL_45944.3 View exemplar Basepair signature: cWW-L-cWW-L-tWH-L-R-L History status: Exact match	11	5
111	IL_66080.1 View exemplar Basepair signature: cWW-cWW-tSH-L-cWW-L History status: New id, 1 parent	13	5
112	IL_88428.1 View exemplar Basepair signature: cWW-cWW-tSH-L-R-L-cWW History status: New id, 1 parent	11	5
113	IL_04638.2 View exemplar Basepair signature: cWW-tSH-tHW-tHS-cSH-cWW-L History status: Exact match tSH-tHS-tHW (3)	13	5
114	IL_38862.3 View exemplar Basepair signature: cWW-cSH-R-tWH-tHS-cWW History status: Updated, 1 parent 5x5 Sarcin-Ricin with intercalated A; G-bulge (3) tSH-tHW-tHS (2)	10	5
115	IL_62552.2 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L History status: Updated, 1 parent	9	5
116	IL_16386.1 View exemplar Basepair signature: cWW-L-cWW History status: Exact match Intercalated cWS (1)		5
117	IL_71457.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-cSH History status: New id, 1 parent SSU/LSU pseudoknot (5)	10	5
118	IL_97255.1 View exemplar Basepair signature: cWW-tSH-L-cWW-L History status: New id, 1 parent Isolated basepair with bulged bases (3) Minor groove platform with extra cWW (1)	8	5
119	IL_02284.8 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Updated, 2 parents Decoding loop related (1)	7	5
120	IL_32449.1 View exemplar Basepair signature: cWW-cWW-L-R-L-R-L-R-cWW History status: New id, 2 parents tSH-tHW-tHS-cWW (1) Double sheared; A in syn; two near cWW pairs (1) Triple sheared related (1)	12	5
121	IL_83162.7 View exemplar Basepair signature: cWW-tSH-L-tHH-L-cWW History status: Updated, 1 parent tHS double platform (2)		5
122	IL_55178.2 View exemplar Basepair signature: cWW-cWW-tWW-cWW History status: Updated, 1 parent tWW and non-canonical cWW (1) Tandem non-canonical cWW pairs (1) Non canonical cWW and near pair (1) tWW and near cWH (1)	8	5
123	IL_17069.4 View exemplar Basepair signature: cWW-tSH-tHH-cSS-tWW-tHH-tSS-cWW History status: Exact match Kink-turn related (4)	13	5
124	IL_29346.1 View exemplar Basepair signature: cWW-L-cWW-L-L History status: Exact match Left turn (3)	7	4
125	IL_46607.1 View exemplar Basepair signature: cWW-cWW-cWW-cWW History status: New id, 1 parent Tandem non-canonical cWW pairs (1)	8	4
126	IL_55953.3 View exemplar Basepair signature: cWW-tSH-tHS-R-L-L-R-cWW History status: Exact match	12	4
127	IL_35350.1 View exemplar Basepair signature: cWW-L-R-cWW History status: New id, 2 parents Isolated cWH basepair (3)	6	4
128	IL_65653.1 View exemplar Basepair signature: cWW-tSW-tHW-tWW-tWH-cSH-L-L-tHS-L-cWW-L History status: Exact match	16	4
129	IL_80604.3 View exemplar Basepair signature: cWW-cWW-tWH-tWH-tHW-L-R-cWW History status: Updated, 1 parent tWH-tWH-tHW-tHW (3)	14	4
130	IL_53985.1 View exemplar Basepair signature: cWW-tSH-tSH-L-R-cWW-cWW History status: New id, 1 parent	12	4
131	IL_08296.4 View exemplar Basepair signature: cWW-L-tHS-L-cWW History status: Exact match UAA/GAN related, with intercalation (3)	8	4
132	IL_99772.1 View exemplar Basepair signature: cWW-L-R-L-R-cWW History status: New id, 1 parent Non canonical cWW and near pair (1) Tandem non-canonical cWW pairs (1)	8	4
133	IL_75461.4 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Exact match 180 degree turn (4)		4
134	IL_06136.1 View exemplar Basepair signature: cWW-tSH-tSH-tHS-tHS-cWW History status: Exact match Quadruple sheared (4)	12	4
135	IL_59344.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-cWW History status: New id, 2 parents Tandem non-canonical cWW pairs with near WC pairs (1) Triple sheared with non-canonical cWW (1)	12	4
136	IL_68506.1 View exemplar Basepair signature: cWW-cWW-tSH-tHW-tHW-L-R-L-cWW-cWW History status: Exact match	17	4
137	IL_23419.1 View exemplar Basepair signature: cWW-cWW History status: New id, 2 parents Minor groove platform (2) Multiple bulged bases (1)	4	4
138	IL_33912.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L History status: Exact match		4
139	IL_88269.3 View exemplar Basepair signature: cWW-L-R-cSH-tWH-tHS-cWW History status: Exact match 6x5 Sarcin-Ricin; G-bulge (3) tSH-tHW-tWW (1)	11	4
140	IL_93830.3 View exemplar Basepair signature: cWW-cWW-L-R-cSH-R-tWH-tHS-cWW History status: Exact match 7x7 Sarcin-Ricin with intercalated A; G-bulge (3)	14	4
141	IL_18471.2 View exemplar Basepair signature: cWW-cSH-cWW-cWW History status: Exact match Major groove platform with extra cWW (2)	7	4
142	IL_36940.1 View exemplar Basepair signature: cWW-L-R-tHS-cWW History status: New id, 1 parent Other IL (1) tSH-tHW (1)	8	4
143	IL_76308.5 View exemplar Basepair signature: cWW-tSH-tHW-tHS-cWW-cWW History status: Updated, 1 parent tSH-tHW-tHS-cWW (4)	12	4
144	IL_49460.2 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-L History status: Exact match		4
145	IL_36973.7 View exemplar Basepair signature: cWW-tSH-L-R-L-R-L-R-cWW-cWW History status: Updated, 1 parent	14	4
146	IL_47959.1 View exemplar Basepair signature: cWW-L-R-L-R-cWW History status: New id, 1 parent Tandem non-canonical cWW pairs (1) Isolated cWH basepair with non-canonical cWW (1)	8	4
147	IL_76319.2 View exemplar Basepair signature: cWW-L-cWS-cWW History status: Exact match Isolated cWS basepair (2)	7	4
148	IL_92446.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: New id, 1 parent	7	4
149	IL_97697.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-L-L History status: Exact match Reverse turn (4)	11	4
150	IL_74697.2 View exemplar Basepair signature: cWW-cWW-L-R-L-cWW History status: Exact match Decoding loop related (1)		4
151	IL_04797.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-cWW History status: New id, 1 parent		4
152	IL_50715.2 View exemplar Basepair signature: cWW-tSH-tHH-L-R-L-R-cSH-tWW-cWW-L-L-L-R-L History status: Exact match	21	4
153	IL_74733.1 View exemplar Basepair signature: cWW-tSH-tHH-cSH-tWH-tHS-cWW-L History status: New id, 1 parent 8x6 Sarcin-Ricin with inserted Y; G-bulge (3)	14	3
154	IL_05192.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW History status: Exact match		3
155	IL_69440.2 View exemplar Basepair signature: cWW-L-R-cSH-cWW History status: Exact match	8	3
156	IL_26728.2 View exemplar Basepair signature: cWW-cSH-R-cSH-cWW-cWW History status: Exact match	9	3
157	IL_58960.1 View exemplar Basepair signature: cWW-L-cWW-L-tWW-L-R-L History status: Exact match	11	3
158	IL_90318.2 View exemplar Basepair signature: cWW-tSH-L-R-L-R-cWW History status: Exact match UAA/GAN with extra stack (2)		3
159	IL_19724.2 View exemplar Basepair signature: cWW-L-cWW-L-cSH History status: Exact match	7	3
160	IL_39753.1 View exemplar Basepair signature: cWW-L-R-tWH-L-R-L-cWW-cWW History status: Exact match tWH-tWH-tHW-tHW (1)	13	3
161	IL_48444.1 View exemplar Basepair signature: cWW-L-R-cWW-cWW History status: New id, 1 parent	8	3
162	IL_87284.1 View exemplar Basepair signature: cWW-tSH-tHW-tWH-tHS-cWW History status: Exact match tSH-tHW-tWH-tHS (3)	12	3
163	IL_26785.1 View exemplar Basepair signature: cWW-tSH-tHH-cSH-tWH-tHS-R-L-cWW-L-cWW History status: Exact match 10x8 Sarcin-Ricin; G-bulge (3)	18	3
164	IL_03350.1 View exemplar Basepair signature: cWW-tWH-cWW-L-L-cWW-L-L-L History status: New id, no parents Reverse kink-turn related (3)	13	3
165	IL_46691.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L-R History status: New id, 1 parent	10	3
166	IL_63797.2 View exemplar Basepair signature: cWW-cWS-cWW History status: Exact match Major groove intercalation (1) Minor groove platform (1)	5	3
167	IL_70627.2 View exemplar Basepair signature: cWW-tWH-L-R-cWW History status: Exact match UAA/GAN related (2)		3
168	IL_35728.2 View exemplar Basepair signature: cWW-L-R-tSH-tHW-tHH-tHS-cWW-cWW History status: Exact match 9x8 Sarcin-Ricin; G-bulge (1) tSH-tHW-tHH-tHS (1)	16	3
169	IL_74051.1 View exemplar Basepair signature: cWW-tSS-tSH-L-tHS-cWW-L History status: Exact match Kink-turn (3)	11	3
170	IL_19897.2 View exemplar Basepair signature: cWW-L-cWW-L-L-tWH-R-L History status: Updated, 1 parent	11	3
171	IL_67877.1 View exemplar Basepair signature: cWW-cWH-cWW-cWW History status: New id, 1 parent	7	3
172	IL_75283.2 View exemplar Basepair signature: cWW-tSS-L-R-L-tHS-L-cWW-L-tWH-tWH-L-L-R History status: Exact match	18	3
173	IL_17806.1 View exemplar Basepair signature: cWW-L-cWW-cWW History status: Exact match	7	3
174	IL_65851.2 View exemplar Basepair signature: cWW-L-R-tSH-tHW-tHS-cWW-cWW History status: Exact match tSH-tHW-tHS with extra cWW pairs (1)		3
175	IL_68444.1 View exemplar Basepair signature: cWW-cWW History status: New id, 1 parent Multiple bulged bases (1) Stack outside cWW (1)	4	3
176	IL_09129.1 View exemplar Basepair signature: cWW-tWH-tWH-L-R-L-R-tWW-cWW History status: Exact match	14	3
177	IL_27393.7 View exemplar Basepair signature: cWW-L-cWW-L-L-R History status: Exact match	8	3
178	IL_30542.4 View exemplar Basepair signature: cWW-L-R-L-cWW-L History status: Updated, 1 parent	8	3
179	IL_96303.1 View exemplar Basepair signature: cWW-cSH-tSW-tHW-cWW-L-L-R-L-R History status: Exact match	13	3
180	IL_91414.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: New id, 1 parent Minor groove platform with extra cWW (2)	7	3
181	IL_47298.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Exact match	7	3
182	IL_68574.3 View exemplar Basepair signature: cWW-tHH-tHS-cWW History status: Exact match	8	3
183	IL_78349.2 View exemplar Basepair signature: cWW-tSH-L-R-L-R-L-R-L-cWW-L History status: Updated, 1 parent	14	3
184	IL_10207.2 View exemplar Basepair signature: cWW-L-R-L-cSH-cSW-L-R-L-cWW-cWW History status: Exact match Minor groove platform related (3)		3
185	IL_82426.4 View exemplar Basepair signature: cWW-cHW-R-L-cHW-cHW-cHW-L-cWW-R History status: Exact match Part of G-quadruplex (3)	14	3
186	IL_20624.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, 1 parent Major groove platform (2) Major groove platform; stack outside cWW (1)	5	3
187	IL_34470.2 View exemplar Basepair signature: cWW-cWW-L-R-tSH-tHH-cSH-tWH-tHS-cWW History status: Exact match 9x8 Sarcin-Ricin with GA cWW pair; G-bulge (2) 9x9 Sarcin-Ricin with pseudoknotted region; G-bulge (1)		3
188	IL_64858.1 View exemplar Basepair signature: cWW-cHW-cWH-R-L-cWH-cHW-cHW-cWH-cWH-cHW-L-cWW-L-R-cWW-L-cWW History status: New id, no parents G-quadruplex (3)	22	3
189	IL_18472.2 View exemplar Basepair signature: cWW-L-R-L-cWW-L History status: Exact match Symmetric double minor groove platform (1)	8	3
190	IL_28026.2 View exemplar Basepair signature: cWW-tSH-tWH-cWH-tSS-tHW-tHH-cWW History status: Updated, 1 parent	14	3
191	IL_14177.1 View exemplar Basepair signature: cWW-L-R-cWW History status: Exact match	6	3
192	IL_34739.3 View exemplar Basepair signature: cWW-tWW-tWW-L-R-L-R-L-cWW-L-L-R-L-R-L-R-L-R History status: Exact match	20	3
193	IL_64879.2 View exemplar Basepair signature: cWW-L-R-tSH-L-R-L-cWW History status: Exact match Triple sheared related (2) Other IL (1)	11	3
194	IL_60192.2 View exemplar Basepair signature: cWW-tSH-tSH-tSS-tHS-L-R-cWW History status: Exact match Kink-turn (2)	12	3
195	IL_64900.1 View exemplar Basepair signature: cWW-cWW-tSS-tSH-L-tHS-R-cWW-L History status: Exact match Kink-turn (3)	14	3
196	IL_02349.4 View exemplar Basepair signature: cWW-tSH-tWH-cSH-tWH-tHS-cWW History status: Exact match 8x6 Sarcin-Ricin with bulged A; G-bulge (3)	13	3
197	IL_67474.5 View exemplar Basepair signature: cWW-L-cWW-L History status: Exact match 180 degree turn (3)		3
198	IL_14935.1 View exemplar Basepair signature: cWW-cWW-L-R-cWW-cWW History status: New id, 1 parent Triple non-canonical cWW pairs (2)	10	3
199	IL_86932.1 View exemplar Basepair signature: cWW-L-R-L-R-cWW-cWW History status: New id, 1 parent Partly complementary (3)	10	3
200	IL_95395.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW History status: New id, 1 parent Other IL (1)		3
201	IL_28976.1 View exemplar Basepair signature: cWW-L-cWW-cSH-R-cWW History status: New id, no parents	10	2
202	IL_37722.1 View exemplar Basepair signature: cWW-L-tSH-L-tHW-tHS-R-cWW-L History status: Exact match Kink-turn (1)	14	2
203	IL_46559.1 View exemplar Basepair signature: cWW-L-tHH-L-R-L-cWW-L-R History status: Exact match		2
204	IL_53762.1 View exemplar Basepair signature: cWW-tSH-tHH-L-R-L-R-L-R-L-R-L-R-L-R-L-cWW-L-cWW-L History status: Exact match	24	2
205	IL_83690.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, 1 parent Major groove platform (1)	5	2
206	IL_48431.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW History status: Exact match	9	2
207	IL_87034.1 View exemplar Basepair signature: cWW-L-cWW History status: Exact match	7	2
208	IL_07880.1 View exemplar Basepair signature: cWW-cSS-L-tWH-tHW-cWW-cWW History status: New id, 1 parent Kink-turn related (1)	11	2
209	IL_02999.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-cWW-cWW History status: New id, no parents		2
210	IL_74794.1 View exemplar Basepair signature: cWW-L-cWW-L-L History status: Exact match	7	2
211	IL_05435.1 View exemplar Basepair signature: cWW-cWW-cWW History status: New id, 1 parent Isolated non-canonical cWW pair (2)	6	2
212	IL_84251.1 View exemplar Basepair signature: cWW-L-tHS-cWW History status: Exact match	8	2
213	IL_15174.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-cSS-cWW-L History status: Exact match	13	2
214	IL_42032.1 View exemplar Basepair signature: cWW-cSH-cWW-tWH-L-cWW-L-L History status: Exact match	11	2
215	IL_48554.1 View exemplar Basepair signature: cWW-L-R-L-R-cWW History status: New id, 1 parent	8	2
216	IL_77576.1 View exemplar Basepair signature: cWW-tSH-tHW-L-cWW-L-L-R History status: New id, no parents Triple non-canonical cWW pairs (1) Partly complementary (1)	10	2
217	IL_27086.1 View exemplar Basepair signature: cWW-tWW-L-tWW-cWW-L History status: Exact match	10	2
218	IL_80884.1 View exemplar Basepair signature: cWW-L-cWW-L-cWW-L-L History status: Exact match	10	2
219	IL_38319.1 View exemplar Basepair signature: cWW-cWW-L-R-cSH-cWW History status: New id, 1 parent		2
220	IL_93699.1 View exemplar Basepair signature: cWW-L-R-L-R-L-tHS-L-cWW-L History status: Exact match Kink-turn (1)	13	2
221	IL_15218.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L-R-L-R-L History status: Exact match	13	2
222	IL_45735.1 View exemplar Basepair signature: cWW-tSH-L-R-L-tHH-cWW History status: New id, 1 parent tHS double platform (1)		2
223	IL_51799.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, 2 parents Single bulged A (1)	5	2
224	IL_59302.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L History status: Exact match	9	2
225	IL_74114.1 View exemplar Basepair signature: cWW-cWS-cWW-L-R History status: Exact match	8	2
226	IL_38394.1 View exemplar Basepair signature: cWW-tWH-cWW-L-L-R-L History status: Exact match Stack outside cWW (1)	10	2
227	IL_93760.1 View exemplar Basepair signature: cWW-tSH-L-R-L-cWW-L History status: New id, 2 parents		2
228	IL_33886.1 View exemplar Basepair signature: cWW-L-cWW-L-R-L-R-cWW History status: New id, no parents Kink-turn with embedded cWW pair (2)	11	2
229	IL_96141.3 View exemplar Basepair signature: cWW-L-R-tSH-L-R-cWW History status: Updated, 1 parent Triple sheared (2)	10	2
230	IL_74125.1 View exemplar Basepair signature: cWW-L-cWW-L History status: Exact match	6	2
231	IL_81522.1 View exemplar Basepair signature: cWW-cWS-L-cWW History status: Exact match Major groove minor groove platform with intercalation; mini C-loop (2)	6	2
232	IL_04332.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L-R-L-R-L History status: New id, 1 parent		2
233	IL_38420.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, 1 parent 90 degree turn (2)	5	2
234	IL_62034.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: New id, 1 parent	7	2
235	IL_57343.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-cWW History status: Exact match		2
236	IL_64509.1 View exemplar Basepair signature: cWW-tWW-tWW-tSS-L-cWW History status: Exact match Kink-turn related (1)	11	2
237	IL_77870.1 View exemplar Basepair signature: cWW-L-R-L-tHS-L-cWW-L-cWW History status: Exact match	13	2
238	IL_18382.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-R-cWW History status: New id, no parents		2
239	IL_38634.5 View exemplar Basepair signature: cWW-cWH-L-R-cWW History status: Exact match cWH basepair and non-canonical AC (2)	8	2
240	IL_54702.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-L History status: New id, 1 parent	10	2
241	IL_62067.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-cWW History status: New id, 2 parents Other IL (2)	11	2
242	IL_33943.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-cWW History status: New id, no parents	12	2
243	IL_49366.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, 1 parent Multiple bulged bases (1)	5	2
244	IL_53064.1 View exemplar Basepair signature: cWW-cWW-L-R-L-R-L-R-L-R-L-cWW-L History status: New id, 1 parent	16	2
245	IL_74284.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-cWW History status: Exact match	10	2
246	IL_91592.1 View exemplar Basepair signature: cWW-L-tHH-L-cWW-L-L History status: Exact match	10	2
247	IL_14135.1 View exemplar Basepair signature: cWW-tSH-tHH-cSH-tWH-tHS-cWW-L History status: New id, 1 parent 8x6 Sarcin-Ricin with inserted Y; G-bulge (2)	14	2
248	IL_06691.1 View exemplar Basepair signature: cWW-cWS-L-R-L-R-cWW-L History status: New id, 2 parents	11	2
249	IL_58032.1 View exemplar Basepair signature: cWW-tWH-cWW-L-L-R History status: Exact match Major groove platform; stack outside cWW (1)	9	2
250	IL_88613.1 View exemplar Basepair signature: cWW-L-R-tSW-tHH-cSH-tWH-tHS-cWW History status: Exact match 8x7 Sarcin-Ricin; G-bulge (1)	15	2
251	IL_10447.1 View exemplar Basepair signature: cWW-tWW-L-R-L-R-L-R-L-tHW-R-L-cWW History status: Exact match	17	2
252	IL_10484.1 View exemplar Basepair signature: cWW-tSH-tHS-cWW History status: Exact match Double sheared (2)	8	2
253	IL_46284.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L History status: New id, 1 parent C-loop with extra cWW pair (1)	9	2
254	IL_53581.1 View exemplar Basepair signature: cWW-tWW-L-tWH-cSS-tSS-tWH-cSS-tWH-R-tSS-R-L-L-cWW-L-cWW History status: Exact match Kink-turn related (2)	22	2
255	IL_74684.1 View exemplar Basepair signature: cWW-L-cWW-L History status: Exact match		2
256	IL_22046.1 View exemplar Basepair signature: cWW-L-cWW-L-cWW-L History status: Exact match Other IL (1)	9	2
257	IL_62898.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: New id, 1 parent	7	2
258	IL_76458.1 View exemplar Basepair signature: cWW-cSH-L-cWW History status: Exact match Minor groove platform (1)	6	2
259	IL_95004.1 View exemplar Basepair signature: cWW-cWH-R-L-cWW-L-L History status: Exact match		2
260	IL_25495.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-cWW History status: New id, 1 parent	10	2
261	IL_44624.1 View exemplar Basepair signature: cWW-tWH-cWW-L-cWW-tSS-cSS-cWW-L History status: New id, no parents	14	2
262	IL_11347.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L History status: Exact match	8	2
263	IL_53749.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L-R-L History status: Exact match	9	2
264	IL_22248.1 View exemplar Basepair signature: cWW-cWW-cSH-cWW-L History status: Exact match Other IL (1)		2
265	IL_69313.1 View exemplar Basepair signature: cWW-tWH-tHH-tHS-cWW History status: Exact match	10	2
266	IL_07703.1 View exemplar Basepair signature: cWW-tSH-cSH-tWH-cSH-cHW-cWH-cWW-cWW History status: Exact match	15	2
267	IL_26564.1 View exemplar Basepair signature: cWW-L-R-tWH-L-R-L-R-L-cWW History status: New id, 1 parent	13	2
268	IL_34822.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-cWW History status: Exact match	12	2
269	IL_44998.1 View exemplar Basepair signature: cWW-cWW-R-cWW-tSS-R-cWW-cWW-L-cWW-L-L-L-cWW-L-cSS-L-R-L-R History status: Exact match	25	2
270	IL_19516.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-L-cWW-L-L-L-R-L-R History status: Exact match Pseudoknot (1)	18	1
271	IL_93094.1 View exemplar Basepair signature: cWW-L-tHH-L-tHS-L-cWW History status: Exact match Reverse kink-turn (1)	11	1
272	IL_22252.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-cWW-L History status: Exact match Kink-turn related (1)	16	1
273	IL_39287.1 View exemplar Basepair signature: cWW-L-R-L-tSH-tSS-L-tHS-cWW-L-L History status: Exact match Kink-turn related (1)	15	1
274	IL_55917.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R History status: New id, no parents	8	1
275	IL_51191.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L History status: Exact match	9	1
276	IL_73759.1 View exemplar Basepair signature: cWW-cSH-tHS-cWH-cHW-cWW History status: Exact match Part of G-quadruplex (1)	9	1
277	IL_80412.1 View exemplar Basepair signature: cWW-tSW-L-cWW-L-L-R-L History status: Exact match	11	1
278	IL_99396.1 View exemplar Basepair signature: cWW-R-L-R-L-cHW-L-R-L-R-L-R-L-R-tWW-R-L-R-L-R-L-L-cWW-R-R-L-R-R-L-R-L-R-L-R History status: New id, no parents	38	1
279	IL_53787.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L-R-L-R-L-R History status: Exact match Pseudoknot (1)	14	1
280	IL_61242.1 View exemplar Basepair signature: cWW-cWW-L-R-L-R-cWW History status: Exact match	10	1
281	IL_67780.1 View exemplar Basepair signature: cWW-cSH-L-R-L-L-R-L History status: New id, no parents	10	1
282	IL_84205.1 View exemplar Basepair signature: cWW-L-cWW History status: Exact match 180 degree turn (1)		1
283	IL_15107.1 View exemplar Basepair signature: cWW-R-L-R-L-R-L-R-L-R-L-R-L-L-L-cWW History status: New id, no parents	18	1
284	IL_70096.1 View exemplar Basepair signature: cWW-L-cWW-cWW History status: Exact match Kink-turn related (1)	7	1
285	IL_77045.1 View exemplar Basepair signature: cWW-L-tSW-L-tHW-cWW-L History status: New id, no parents Kink-turn (1)	11	1
286	IL_45488.1 View exemplar Basepair signature: cWW-cWW-L-R-tWH-L-R-cWW History status: Exact match	12	1
287	IL_59027.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L History status: Exact match Kink-turn related (1)	9	1
288	IL_90346.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L History status: Exact match	9	1
289	IL_19852.1 View exemplar Basepair signature: cWW-tWH-cWW-cWH-cWH-cWH History status: Exact match Part of G-quadruplex (1)	11	1
290	IL_29357.1 View exemplar Basepair signature: cWW-L-R-L-R-cWH-tHW-cSH-cWW-L-L-cWW-R-R History status: New id, no parents	18	1
291	IL_61249.1 View exemplar Basepair signature: cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW History status: New id, no parents	20	1
292	IL_93585.1 View exemplar Basepair signature: cWW-L-cWW-L-cWW-tWH-L-cSH-L History status: Exact match Kink-turn related (1)	11	1
293	IL_22821.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-cWW-L-L-R-L History status: Exact match Pseudoknot (1)	17	1
294	IL_33557.1 View exemplar Basepair signature: cWW-tHH-R-L-R-L-L-R-L-R-cWW History status: Exact match Kink-turn related (1)	14	1
295	IL_87290.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L History status: Exact match Kink-turn related (1)	15	1
296	IL_95811.1 View exemplar Basepair signature: cWW-L-cWW-L-cWW-L-R-L History status: Exact match Vitamin B12 Aptamer (1)	11	1
297	IL_17765.1 View exemplar Basepair signature: cWW-tWH-cHW-L-tSS-cSS-cWW-R-L History status: Exact match	14	1
298	IL_51287.1 View exemplar Basepair signature: cWW-tSS-L-R-L-R-L-R-L-cWW-L-R-L-R-tHH-R-L-R-L-R-R-L-R-L-R-R-L-L-R-L-cWW History status: New id, no parents	35	1
299	IL_90348.1 View exemplar Basepair signature: cWW-cSW-L-cWW-L History status: Exact match		1
300	IL_12750.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-cWW History status: Exact match	15	1
301	IL_29826.1 View exemplar Basepair signature: cWW-tSH-tHH-L-R-L-R-cSH-R-R-L-R-L-R-L-R-L-R-L-cWW History status: New id, no parents	25	1
302	IL_84409.1 View exemplar Basepair signature: cWW-tSS-L-cWH-L-cSH-cHW-tWH-cSS-tWH-tSW-cWS-R-L-R-cSH-R-cWW-L History status: Exact match	23	1
303	IL_06083.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L History status: New id, no parents	11	1
304	IL_33835.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW History status: New id, no parents	9	1
305	IL_48600.1 View exemplar Basepair signature: cWW-L-cWW-cWW-R-L-tHS-cWW History status: New id, no parents	13	1
306	IL_70801.1 View exemplar Basepair signature: cWW-cWW-L-R-tWW-L-R-L-cWW History status: Exact match	13	1
307	IL_87495.1 View exemplar Basepair signature: cWW-R-L-R-L-L-L History status: New id, no parents	8	1
308	IL_95961.1 View exemplar Basepair signature: cWW-tSH-L-cWW-L History status: Exact match		1
309	IL_00087.1 View exemplar Basepair signature: cWW-L-R-tSH-L-cWS-R-L-R-L-R-cWW History status: New id, no parents	16	1
310	IL_81392.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-L-L-R-L History status: New id, no parents	13	1
311	IL_04105.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-cWW-L-L-R History status: Exact match	16	1
312	IL_13244.1 View exemplar Basepair signature: cWW-tSH-L-cWW-L-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R History status: New id, no parents	32	1
313	IL_30441.1 View exemplar Basepair signature: cWW-cSH-tSW-tHW-cWW-L-L-R-L-L-R History status: Exact match	14	1
314	IL_47108.1 View exemplar Basepair signature: cWW-L-R-L-tHH-L-cWW History status: Exact match	9	1
315	IL_84665.1 View exemplar Basepair signature: cWW-L-cSW-cWW-L-L-R-L-R-L-R-L History status: Exact match	15	1
316	IL_23152.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L-R-L History status: Exact match	11	1
317	IL_42778.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-cWW History status: New id, no parents	11	1
318	IL_48802.1 View exemplar Basepair signature: cWW-R-L-R-L-R-L-R-L-L-L-L-R History status: New id, no parents	14	1
319	IL_77827.1 View exemplar Basepair signature: cWW-tSS-R-L-L-R-L-cWW-tHH-L-R-L-R-L-R-L-R-L-R-L-cSH-R-R-L-R-L-R-cWW-R-cWW-R-L-R-L-R-L-R-R History status: Exact match	45	1
320	IL_88072.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L-R-L-R-L History status: New id, 1 parent	13	1
321	IL_18200.1 View exemplar Basepair signature: cWW-L-R-tHW-tHW-L-R-L-R-cWW-cWW History status: New id, 1 parent	16	1
322	IL_36471.1 View exemplar Basepair signature: cWW-R-L-R-L-L-L History status: New id, 1 parent	8	1
323	IL_45896.1 View exemplar Basepair signature: cWW-cWW-cWW History status: New id, no parents	11	1
324	IL_13394.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R History status: Exact match	21	1
325	IL_20245.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-R-L-cWW-L-L-R-L History status: Exact match	18	1
326	IL_85222.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-L-L History status: Exact match	11	1
327	IL_06300.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW History status: Exact match	9	1
328	IL_15484.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-cWW-cSH History status: Exact match	14	1
329	IL_43140.1 View exemplar Basepair signature: cWW-L-cWW-cWH-L-L History status: Exact match	9	1
330	IL_49010.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-R-tWH-L-R-cWW History status: New id, no parents	20	1
331	IL_00559.1 View exemplar Basepair signature: cWW-cWW-L-cWW-L-L-R-L-R-L-R-L-R-L-R-L History status: Exact match	18	1
332	IL_52743.1 View exemplar Basepair signature: cWW-tSW-L-cSW-L-cWW-L History status: Exact match	10	1
333	IL_74184.1 View exemplar Basepair signature: cWW-L-tHS-L-cWW-L-L-L History status: Exact match	11	1
334	IL_81731.1 View exemplar Basepair signature: cWW-cWW-L-R-L-R-L-cWW-L-tWW-L-R-L History status: New id, no parents	17	1
335	IL_13874.1 View exemplar Basepair signature: cWW-cWH-tHS-cWW-cSH-cWH-cHW-cWW History status: New id, no parents	12	1
336	IL_20463.1 View exemplar Basepair signature: cWW-tSH-tHW-cSH-tHH-cWH-L-R-cWW-L-L-R History status: Exact match 7x11 Sarcin-Ricin with pseudoknotted region; G-bulge (1)	18	1
337	IL_85630.1 View exemplar Basepair signature: cWW-tSH-L-R-L-R-L-cWW-L-cWW-L History status: Exact match	15	1
338	IL_06463.1 View exemplar Basepair signature: cWW-L-tHS-tSW-tWH-cWH-cWW-L-cWW History status: New id, no parents	15	1
339	IL_16073.1 View exemplar Basepair signature: cWW-L-cWW-L-cWW-L-L-L-R History status: Exact match	12	1
340	IL_24499.1 View exemplar Basepair signature: cWW-cWS-L-R-L-R-cWW-L-cSH-L History status: Exact match	12	1
341	IL_44325.1 View exemplar Basepair signature: cWW-cWH-cWW-L History status: Exact match	6	1
342	IL_57881.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, 1 parent Multiple bulged bases (1)	5	1
343	IL_64842.1 View exemplar Basepair signature: cWW-L-tWH-L-cWW-L-cSH History status: Exact match	10	1
344	IL_96371.1 View exemplar Basepair signature: cWW-tHH-cWW History status: Exact match	6	1
345	IL_01393.1 View exemplar Basepair signature: cWW-L-cWW-L-L History status: Exact match	6	1
346	IL_46020.1 View exemplar Basepair signature: cWW-cHW-cHW-cWW History status: New id, no parents	7	1
347	IL_31504.1 View exemplar Basepair signature: cWW-cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L History status: Exact match	18	1
348	IL_54737.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R History status: New id, no parents	20	1
349	IL_85652.1 View exemplar Basepair signature: cWW-tSH-L-R-L-R-L-cWW-L History status: Exact match	12	1
350	IL_93889.1 View exemplar Basepair signature: cWW-R-tSH-L-cSH-L-L-R-L-R-L-R-L-R-L-R-L-L History status: New id, no parents	21	1
351	IL_44519.1 View exemplar Basepair signature: cWW-R-L-L-L-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R History status: New id, no parents	24	1
352	IL_79147.1 View exemplar Basepair signature: cWW-L-R-L-R-tWH-L-R-L-cWW-L History status: New id, 1 parent	14	1
353	IL_97218.1 View exemplar Basepair signature: cWW-L-R-L-cSH-L-L-R-L-R-L-R-L-R-L-cWW-L-L History status: New id, no parents	21	1
354	IL_02203.1 View exemplar Basepair signature: cWW-cSW-cWW-cWW History status: New id, 1 parent	8	1
355	IL_46112.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L History status: Exact match	9	1
356	IL_59724.1 View exemplar Basepair signature: cWW-L-R-L-R-cSH-tWH-tHS-R-L-cWW History status: Exact match 8x7 Sarcin-Ricin with CC bifurcated pair; G-bulge (1)	15	1
357	IL_83023.1 View exemplar Basepair signature: cWW-R-L-R-L-R-L-L-L-L History status: New id, 1 parent	11	1
358	IL_91920.1 View exemplar Basepair signature: cWW-cWW-tHH-cWW History status: Exact match	8	1
359	IL_32357.1 View exemplar Basepair signature: cWW-L-cWW-cWW History status: New id, 1 parent	7	1
360	IL_38882.1 View exemplar Basepair signature: cWW-L-R-tSS-R-L-tSH-R-L-cWW-R-L-R-L-cWW History status: Exact match	18	1
361	IL_54896.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L-R-L-R History status: Exact match	12	1
362	IL_62654.1 View exemplar Basepair signature: cWW-tSH-tHH-tHS-cWW History status: Exact match tSH-tHH-tHS (1)	10	1
363	IL_94351.1 View exemplar Basepair signature: cWW-L-R-L-R-L-tHS-cWW History status: Exact match	11	1
364	IL_79846.1 View exemplar Basepair signature: cWW-R-L-L-tWH-cWW-L-L-L-R-L-R-cSH-L-L History status: New id, no parents	19	1
365	IL_19048.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cSH-L-R-cWW-cWW History status: Exact match	14	1
366	IL_28030.1 View exemplar Basepair signature: cWW-cSW-cWW-cWW History status: New id, no parents Isolated cWH basepair (1)	6	1
367	IL_04736.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-cWW History status: Exact match	12	1
368	IL_14882.1 View exemplar Basepair signature: cWW-tSH-L-cWW-L-L-R-L History status: New id, 1 parent	11	1
369	IL_47972.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L History status: Exact match	8	1
370	IL_07612.1 View exemplar Basepair signature: cWW-cWS-tHS-cWH-R-L-cWW-L History status: New id, 1 parent		1
371	IL_16665.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-cWW History status: Exact match	11	1
372	IL_34780.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-cWW-cWW-cWW History status: Exact match Kink-turn (1)	16	1
373	IL_73662.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L-R-L-R History status: Exact match	12	1
374	IL_88948.1 View exemplar Basepair signature: cWW-tSH-tWW-tHS-cWW History status: New id, 1 parent	10	1
375	IL_28564.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Exact match	7	1
376	IL_46461.1 View exemplar Basepair signature: cWW-L-tHH-L-tHS-L-cWW-L-L-L-L-R-L-R-tSW-R-R-L-R-L-R-L-R History status: Exact match	28	1
377	IL_60448.1 View exemplar Basepair signature: cWW-L-cWW-L-R-L-tWH-L-tHS-L-R-L-cWW-L-R History status: New id, no parents	20	1
378	IL_38969.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L History status: Exact match Reverse kink-turn related (1)	9	1
379	IL_62984.1 View exemplar Basepair signature: cWW-tHS-tWH-cWH-cWW-L-L-cWW History status: New id, no parents	13	1
380	IL_76460.1 View exemplar Basepair signature: cWW-cWW-L-tHS-L-R-L-cWW-L-L-R-L-L-R-L-R-L-R History status: New id, no parents	22	1
381	IL_58809.1 View exemplar Basepair signature: cWW-tSS-L-R-L-R-L-R-L-cWW-L-L-R-L-R-L-L-R History status: Exact match Kink-turn related (1)	19	1
382	IL_73700.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-cWW-tHS-cWW History status: New id, no parents	13	1
383	IL_80287.1 View exemplar Basepair signature: cWW-tSH-tHH-L-tHS-cWW History status: New id, 1 parent	11	1
384	IL_99095.1 View exemplar Basepair signature: cWW-tSS-L-tSH-L-R-R-R-L-cWW-L-cWW History status: New id, no parents	16	1

Coloring options:
Nucleotide numbers

New id, no parents 45; Updated, 1 parent 39; Exact match 187; New id, 1 parent 68; Updated, 2 parents 9; New id, 2 parents 30; New id, > 2 parents 6;

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