PDBID | FR3D analysis | Chain(s) | NTs | Pairs | Res | Date | Organism | Description provided by author | Author | Also represents |
3IZ9 | 3IZ9 | ABC | 3472 | 1317 | 5.5 | 12-01-10 | TRITICUM AESTIVUM,TRITICUM AESTIVUM,TRITICUM AESTIVUM | MODEL OF THE LARGE SUBUNIT RNA BASED ON A 5.5 A CRYO-EM MAP OF TRITICUM AESTIVUM TRANSLATING 80S RIBOSOME | J.-P.ARMACHE,A.JARASCH,A.M.ANGER,E.VILLA,T.BECKER,S.BHUSHAN, F.JOSSINET,M.HABECK,G.DINDAR,S.FRANCKENBERG,V.MARQUEZ,T.MIELKE, M.THOMM,O.BERNINGHAUSEN,B.BEATRIX,J.SOEDING,E.WESTHOF,D.N.WILSON, R.BECKMANN | |
3U5H | 3U5H | 578 | 3429 | 1428 | 3.0 | 12-21-11 | SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE | THE STRUCTURE OF THE EUKARYOTIC RIBOSOME AT 3.0 A RESOLUTION | A.BEN-SHEM,N.GARREAU DE LOUBRESSE,S.MELNIKOV,L.JENNER,G.YUSUPOVA, M.YUSUPOV | 4B6B 3U5D 3O58 3O5H Compare |
3IZF | 3IZF | ABC | 3436 | 1231 | 10.0 | 12-01-10 | SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE | MODEL OF THE LARGE SUBUNIT RNA BASED ON A 6.1 A CRYO-EM MAP OF SACCHAROMYCES CEREVISIAE TRANSLATING 80S RIBOSOME (WITH ES27L-IN CONFORMATION) | J.-P.ARMACHE,A.JARASCH,A.M.ANGER,E.VILLA,T.BECKER,S.BHUSHAN, F.JOSSINET,M.HABECK,G.DINDAR,S.FRANCKENBERG,V.MARQUEZ,T.MIELKE, M.THOMM,O.BERNINGHAUSEN,B.BEATRIX,J.SOEDING,E.WESTHOF,D.N.WILSON, R.BECKMANN | |
3JYX | 3JYX | 345 | 3440 | 684 | 8.9 | 12-22-09 | THERMOMYCES LANUGINOSUS,THERMOMYCES LANUGINOSUS,THERMOMYCES LANUGINOSUS | STRUCTURE OF THE 60S RRNA FOR EUKARYOTIC RIBOSOME BASED ON CRYO-EM MAP OF THERMOMYCES LANUGINOSUS RIBOSOME AT 8.9A RESOLUTION | D.J.TAYLOR,B.DEVKOTA,A.D.HUANG,M.TOPF,E.NARAYANAN,A.SALI,S.C.HARVEY, J.FRANK | |
4A1B | 4A1B | 1 | 3119 | 1246 | 3.5 | 11-30-11 | TETRAHYMENA THERMOPHILA | T.THERMOPHILA 60S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 6. THIS FILE CONTAINS 26S RRNA AND PROTEINS OF MOLECULE 3. | S.KLINGE,F.VOIGTS-HOFFMANN,M.LEIBUNDGUT,S.ARPAGAUS,N.BAN | 4A19 4A1D 4A18 Compare |
3J2L | 3J2L | 13 | 3174 | 1185 | 6.6 | 11-28-12 | PYROCOCCUS FURIOSUS,PYROCOCCUS FURIOSUS | PROMISCUOUS BEHAVIOR OF PROTEINS IN ARCHAEAL RIBOSOMES REVEALED BY CRYO-EM: IMPLICATIONS FOR EVOLUTION OF EUKARYOTIC RIBOSOMES (50S RIBOSOMAL RNA) | J.-P.ARMACHE,A.M.ANGER,V.MARQUEZ,S.FRANKENBERG,T.FROEHLICH,E.VILLA, O.BERNINGHAUSEN,M.THOMM,G.J.ARNOLD,R.BECKMANN,D.N.WILSON | |
3V2F | 3V2F | AB | 2918 | 1347 | 2.7 | 5-23-12 | THERMUS THERMOPHILUS,THERMUS THERMOPHILUS | CRYSTAL STRUCTURE OF YFIA BOUND TO THE 70S RIBOSOME. THIS PDB ENTRY CONTAINS COORDINATES FOR THE 50S SUBUNIT OF THE 2ND RIBOSOME IN THE ASU | Y.S.POLIKANOV,G.M.BLAHA,T.A.STEITZ | 3V2D 3V29 3UXR 3V25 3V23 3UXQ 3V27 3PYO 3PYR 4DHC 4DHA 3UYE 3I8I 3UZ1 3TVE 3PYT 3PYV 2WDN 2WDL 3MS1 3MRZ 3F1H 3UZ9 2WH2 3UYG 2WH4 3TVH 3F1F 3OHJ 2WDJ 3UZK 3OHZ 3OHK 3I9E 2WDI 3OI1 3KIT 3UZF 3KIR 3KNM 3UZ2 3OH5 3OH7 3I8F 3UZ8 3HUX 4G5U 3KIW 3UZH 3KIY 3D5B 2XG2 2X9S 3D5D 2XG0 2X9U 2J01 2J03 4G5L 3UZN 3I9C 3FIN 3HUZ 3KNO 4G5W 3OI5 4G5N 2Y0X 3OI3 2Y0V 2WRJ 2WRL 4ABS 2XUX 2Y11 2Y19 2XTG 3KNI 2XQE 2Y0Z 2Y15 2Y17 2Y13 2V47 2V49 1VSP 3KNK 1VSA 3ZVP 2WRR 2WRO 2HGU 2HGJ 2HGQ 2B9P 2B66 2B9N 1YL3 Compare |
2QBG | 2QBG | AB | 2958 | 1364 | 3.3 | 9-25-07 | ESCHERICHIA COLI,ESCHERICHIA COLI | CRYSTAL STRUCTURE OF THE BACTERIAL RIBOSOME FROM ESCHERICHIA COLI IN COMPLEX WITH RIBOSOME RECYCLING FACTOR (RRF). THIS FILE CONTAINS THE 50S SUBUNIT OF THE SECOND 70S RIBOSOME, WITH RRF BOUND. THE ENTIRE CRYSTAL STRUCTURE CONTAINS TWO 70S RIBOSOMES AND IS DESCRIBED IN REMARK 400. | M.A.BOROVINSKAYA,R.D.PAI,W.ZHANG,B.-S.SCHUWIRTH,J.M.HOLTON, G.HIROKAWA,H.KAJI,A.KAJI,J.H.D.CATE | 3ORB 2QBE 3OFC 3I1N 3OAT 2QAO 2AWB 2J28 3OFR 2QAM 2I2V 2I2T 2QBC 2QBA 1VS8 2AW4 2QBK 3OFZ 3SGF 1VS6 2QOZ 3DF2 3DF4 2Z4N 2QP1 2QBI 2Z4L 3R8S 3I1R 3I20 3UOS 3J19 2QOX 2QOV 3R8T 3I1T 3I1P 4GAU 2WWQ 3I22 3FIK 3OAS 3OFD 3J01 3OG0 1VT2 3KCR 3BBX 4GAR 3IZU 3OFQ 3IZT 3J0T 3J0W 3J12 3J14 3J0Y 3J11 2VHM 2VHN 2GYA 2GYC 3E1D 3E1B Compare |
1C2W | 1C2W | B | 2891 | 847 | 7.5 | 4-10-00 | ESCHERICHIA COLI | S RRNA STRUCTURE FITTED TO A CRYO-ELECTRON MICROSCOPIC MAP AT 7.5 ANGSTROMS RESOLUTION | R.BRIMACOMBE,F.MUELLER | |
1PNU | 1PNU | 09 | 2943 | 941 | 8.7 | 7-15-03 | ESCHERICHIA COLI,ESCHERICHIA COLI | CRYSTAL STRUCTURE OF A STREPTOMYCIN DEPENDENT RIBOSOME FROM ESCHERICHIA COLI, 50S SUBUNIT OF 70S RIBOSOME. THIS FILE, 1PNU, CONTAINS ONLY MOLECULES OF THE 50S RIBOSOMAL SUBUNIT. THE 30S SUBUNIT, MRNA, P-SITE TRNA, AND A-SITE TRNA ARE IN THE PDB FILE 1PNS. | A.VILA-SANJURJO,W.K.RIDGEWAY,V.SEYMANER,W.ZHANG,S.SANTOSO, K.YU,J.H.D.CATE | 1PNY 1VOY 1VOU 1VOR 1VP0 1VOW Compare |
2ZJR | 2ZJR | XY | 2808 | 1186 | 2.9 | 6-17-08 | DEINOCOCCUS RADIODURANS,DEINOCOCCUS RADIODURANS | REFINED NATIVE STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT (50S) FROM DEINOCOCCUS RADIODURANS | J.M.HARMS,D.N.WILSON,F.SCHLUENZEN,S.R.CONNELL,T.STACHELHAUS, Z.ZABOROWSKA,C.M.T.SPAHN,P.FUCINI | 3CF5 2ZJP 2ZJQ 3DLL 2AAR 2OGM 3PIO 3JQ4 2D3O 2OGO 1JZY 1K01 1JZX 3PIP 1Y69 1JZZ 1J5A 2O44 2OGN 1OND 1NWX 1NWY 3FWO 1NJO 1NJP 1NKW 1P9X 1NJM 1NJN 2O43 1SM1 1XBP 1Z58 2O45 Compare |
1S1I | 1S1I | 34 | 2916 | 1316 | 11.7 | 5-25-04 | SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE | STRUCTURE OF THE RIBOSOMAL 80S-EEF2-SORDARIN COMPLEX FROM YEAST OBTAINED BY DOCKING ATOMIC MODELS FOR RNA AND PROTEIN COMPONENTS INTO A 11.7 A CRYO-EM MAP. THIS FILE, 1S1I, CONTAINS 60S SUBUNIT. THE 40S RIBOSOMAL SUBUNIT IS IN FILE 1S1H. | C.M.SPAHN,M.G.GOMEZ-LORENZO,R.A.GRASSUCCI,R.JORGENSEN, G.R.ANDERSEN,R.BECKMANN,P.A.PENCZEK,J.P.G.BALLESTA,J.FRANK | |
1S72 | 1S72 | 09 | 2871 | 1382 | 2.4 | 6-15-04 | HALOARCULA MARISMORTUI,HALOARCULA MARISMORTUI | REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION | D.J.KLEIN,T.M.SCHMEING,P.B.MOORE,T.A.STEITZ | 1VQO 1VQP 1VQ6 1VQK 3CC2 3CPW 3CCU 1K73 1JJ2 1M90 1VQ4 1VQ8 3CC4 1VQM 1VQL 3G6E 1VQ9 3CCM 1YHQ 1NJI 1QVF 1VQ7 1VQN 1KQS 3CXC 3CCV 1KC8 1VQ5 3CCQ 3CC7 1YI2 1Q86 3CCL 1YIT 1K9M 3OW2 3CMA 1YJW 1YIJ 1N8R 1FFK 3G71 3CCE 1Q82 1M1K 1YJN 2OTL 1K8A 1QVG 3CD6 1Q7Y 1Q81 1KD1 2OTJ 1YJ9 3I55 2QEX 3I56 3CCS 3CME 3CCR 1W2B 3CCJ 2QA4 3G4S 1FG0 1FFZ Compare |
3BBO | 3BBO | ABC | 2952 | 824 | 9.4 | 5-27-08 | SPINACEA OLERACEA,SPINACEA OLERACEA,SPINACEA OLERACEA | HOMOLOGY MODEL FOR THE SPINACH CHLOROPLAST 50S SUBUNIT FITTED TO 9.4A CRYO-EM MAP OF THE 70S CHLORORIBOSOME | M.R.SHARMA,D.N.WILSON,P.P.DATTA,C.BARAT,F.SCHLUENZEN, P.FUCINI,R.K.AGRAWAL | |
3ZEQ | 3ZEQ | AB | 2300 | 559 | 5.6 | 2-13-13 | TRYPANOSOMA BRUCEI,TRYPANOSOMA BRUCEI | HIGH-RESOLUTION CRYO-ELECTRON MICROSCOPY STRUCTURE OF THE TRYPANOSOMA BRUCEI RIBOSOME | Y.HASHEM,A.DES GEORGES,J.FU,S.N.BUSS,F.JOSSINET,A.JOBE,Q.ZHANG, H.Y.LIAO,R.A.GRASSUCCI,C.BAJAJ,E.WESTHOF,S.MADISON-ANTENUCCI, J.FRANK | |
3ZEX | 3ZEX | ABCDEFGH | 4199 | 1129 | 5.6 | 2-13-13 | TRYPANOSOMA BRUCEI,TRYPANOSOMA BRUCEI,TRYPANOSOMA BRUCEI,TRYPANOSOMA BRUCEI,TRYPANOSOMA BRUCEI,TRYPANOSOMA BRUCEI,TRYPANOSOMA BRUCEI,TRYPANOSOMA BRUCEI | HIGH_RESOLUTION CRYO-ELECTRON MICROSCOPY STRUCTURE OF THE TRYPANOSOMA BRUCEI RIBOSOME | Y.HASHEM,A.DES GEORGES,J.FU,S.N.BUSS,F.JOSSINET,A.JOBE,Q.ZHANG, H.Y.LIAO,R.A.GRASSUCCI,C.BAJAJ,E.WESTHOF,S.MADISON-ANTENUCCI, J.FRANK | |
3U5F | 3U5F | 6 | 1769 | 684 | 3.0 | 12-21-11 | SACCHAROMYCES CEREVISIAE | THE STRUCTURE OF THE EUKARYOTIC RIBOSOME AT 3.0 A RESOLUTION | A.BEN-SHEM,N.GARREAU DE LOUBRESSE,S.MELNIKOV,L.JENNER,G.YUSUPOVA, M.YUSUPOV | 3U5B 3IZE 3O30 3O2Z Compare |
3JYV | 3JYV | 7A | 1820 | 512 | 8.9 | 12-22-09 | THERMOMYCES LANUGINOSUS,THERMOMYCES LANUGINOSUS | STRUCTURE OF THE 40S RRNA AND PROTEINS AND P/E TRNA FOR EUKARYOTIC RIBOSOME BASED ON CRYO-EM MAP OF THERMOMYCES LANUGINOSUS RIBOSOME AT 8.9A RESOLUTION | D.J.TAYLOR,B.DEVKOTA,A.D.HUANG,M.TOPF,E.NARAYANAN,A.SALI,S.C.HARVEY, J.FRANK | |
2XZM | 2XZM | A | 1745 | 565 | 3.9 | 1-19-11 | TETRAHYMENA THERMOPHILA | CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1. THIS FILE CONTAINS THE 40S SUBUNIT AND INITIATION FACTOR FOR MOLECULE 1 | J.RABL,M.LEIBUNDGUT,S.F.ATAIDE,A.HAAG,N.BAN | 2XZN Compare |
2AW7 | 2AW7 | A | 1530 | 693 | 3.5 | 11-08-05 | ESCHERICHIA COLI | CRYSTAL STRUCTURE OF THE BACTERIAL RIBOSOME FROM ESCHERICHIA COLI AT 3.5 A RESOLUTION. THIS FILE CONTAINS THE 30S SUBUNIT OF THE SECOND 70S RIBOSOME. THE ENTIRE CRYSTAL STRUCTURE CONTAINS TWO 70S RIBOSOMES AND IS DESCRIBED IN REMARK 400. | B.S.SCHUWIRTH,M.A.BOROVINSKAYA,C.W.HAU,W.ZHANG,A.VILA- SANJURJO,J.M.HOLTON,J.H.D.CATE | 1VS7 2QAN 2QBF 2QAL 2AVY 4A2I 2QBD 3I1M 3DF3 1VS5 3OFX 3DF1 2QBB 2Z4M 2QB9 3OAQ 4ADV 2QP0 2QBH 3OR9 2Z4K 2QBJ 3OFA 2QOY 3I1Q 2QOW 3I1Z 2I2P 2I2U 3I21 3I1O 2QOU 3OFO 3I1S 3OFB 3ORA 4GD2 3OAR 3OFY 4GD1 3UOQ 3SFS 2WWL 3J00 3FIH 3OFP 3KC4 3IZW 3J18 3IZV 4GAQ 4GAS 3J2H 3J2G 3J10 3J2B 3J2D 3J2F 3J29 3J28 3J2E 3J0U 3J0X 3J0V 3J0Z 3J13 3J2A 3J2C 2GY9 2YKR 2GYB 2VHO 2VHP 3E1C 3E1A Compare |
1PNX | 1PNX | A | 1533 | 661 | 9.5 | 7-15-03 | ESCHERICHIA COLI | CRYSTAL STRUCTURE OF THE WILD TYPE RIBOSOME FROM E. COLI, 30S SUBUNIT OF 70S RIBOSOME. THIS FILE, 1PNX, CONTAINS ONLY MOLECULES OF THE 30S RIBOSOMAL SUBUNIT. THE 50S SUBUNIT IS IN THE PDB FILE 1PNY. | A.VILA-SANJURJO,W.K.RIDGEWAY,V.SEYMANER,W.ZHANG,S.SANTOSO, K.YU,J.H.D.CATE | 1PNS 1VOS 1VOX 1VOQ 1VOV 1VOZ Compare |
1FJG | 1FJG | AX | 1513 | 694 | 3.0 | 9-25-00 | THERMUS THERMOPHILUS,THERMUS THERMOPHILUS | STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTICS STREPTOMYCIN, SPECTINOMYCIN, AND PAROMOMYCIN | A.P.CARTER,W.M.CLEMONS JR.,D.E.BRODERSEN,B.T.WIMBERLY, R.J.MORGAN-WARREN,V.RAMAKRISHNAN | 1J5E 2UUA 2UUC 1N32 1IBL 2UU9 1HR0 2UUB 2VQE 1HNW 1HNX 2VQF 3T1Y 2UXC 1IBK 4DV6 1HNZ 1IBM 4DR6 1XMQ 4AQY 4DR2 3V2C 1XNR 1XNQ 4DUY 2E5L 4DR5 3V2E 3PYN 2ZM6 3PYQ 4DR3 2HHH 3F1E 3F1G 2UXD 3D5A 1XMO 4DV7 3D5C 4DH9 3T1H 3I8H 1N33 4DHB 3MR8 2Y10 3MS0 1I96 3UXT 2UXB 3I8G 4DV4 3UXS 2Y18 3UZ7 4DR1 2Y0W 4DR4 3UZ6 1I94 2Y0U 4G5K 2WRK 2XSY 4DV0 3HUY 3UZ4 2Y0Y 2XUY 3KNN 3KNL 3I9D 2XQD 3UZI 3UYF 2WRI 3I9B 4G5M 3UZG 2Y14 4DR7 3UZ3 2J02 3TVG 2J00 3OGE 3TVF 3V24 3FIC 3UYD 2Y16 3OGY 3UZM 2WDG 2WDH 3KIS 3KIQ 4G5T 2WDM 4DV3 4DV5 2WDK 2X9T 3PYU 3OHC 4G5V 3PYS 4DUZ 3V26 1I95 3OHD 3OI0 2X9R 4DV1 3OHY 3V28 2F4V 3KIX 3KIU 3HUW 4ABR 2WH3 2Y12 2WH1 3OI2 3UZL 3OI4 4DV2 3OTO 3V22 2QNH 2XFZ 3ZVO 3KNH 3KNJ 2B9O 2V46 2B64 2B9M 2V48 2XG1 2OW8 2HGI 1N34 2WRQ 2HGR 2WRN 1N36 2HGP 1YL4 1I97 1FKA Compare |
3IZ7 | 3IZ7 | ABC | 1586 | 477 | 5.5 | 12-01-10 | TRITICUM AESTIVUM,TRITICUM AESTIVUM,TRITICUM AESTIVUM | MODEL OF THE SMALL SUBUNIT RNA BASED ON A 5.5 A CRYO-EM MAP OF TRITICUM AESTIVUM TRANSLATING 80S RIBOSOME | J.-P.ARMACHE,A.JARASCH,A.M.ANGER,E.VILLA,T.BECKER,S.BHUSHAN, F.JOSSINET,M.HABECK,G.DINDAR,S.FRANCKENBERG,V.MARQUEZ,T.MIELKE, M.THOMM,O.BERNINGHAUSEN,B.BEATRIX,J.SOEDING,E.WESTHOF,D.N.WILSON, R.BECKMANN | |
3J20 | 3J20 | 012 | 1648 | 616 | 6.6 | 11-28-12 | PYROCOCCUS FURIOSUS,PYROCOCCUS FURIOSUS,PYROCOCCUS FURIOSUS | PROMISCUOUS BEHAVIOR OF PROTEINS IN ARCHAEAL RIBOSOMES REVEALED BY CRYO-EM: IMPLICATIONS FOR EVOLUTION OF EUKARYOTIC RIBOSOMES (30S RIBOSOMAL SUBUNIT) | J.-P.ARMACHE,A.M.ANGER,V.MARQUEZ,S.FRANKENBERG,T.FROEHLICH,E.VILLA, O.BERNINGHAUSEN,M.THOMM,G.J.ARNOLD,R.BECKMANN,D.N.WILSON | |
3BBN | 3BBN | A | 1478 | 544 | 9.4 | 5-13-08 | SPINACEA OLERACEA | HOMOLOGY MODEL FOR THE SPINACH CHLOROPLAST 30S SUBUNIT FITTED TO 9.4A CRYO-EM MAP OF THE 70S CHLORORIBOSOME. | M.R.SHARMA,D.N.WILSON,P.P.DATTA,C.BARAT,F.SCHLUENZEN, P.FUCINI,R.K.AGRAWAL | |
1S1H | 1S1H | A | 1466 | 626 | 11.7 | 5-25-04 | SACCHAROMYCES CEREVISIAE | STRUCTURE OF THE RIBOSOMAL 80S-EEF2-SORDARIN COMPLEX FROM YEAST OBTAINED BY DOCKING ATOMIC MODELS FOR RNA AND PROTEIN COMPONENTS INTO A 11.7 A CRYO-EM MAP. THIS FILE, 1S1H, CONTAINS 40S SUBUNIT. THE 60S RIBOSOMAL SUBUNIT IS IN FILE 1S1I. | C.M.SPAHN,M.G.GOMEZ-LORENZO,R.A.GRASSUCCI,R.JORGENSEN, G.R.ANDERSEN,R.BECKMANN,P.A.PENCZEK,J.P.G.BALLESTA,J.FRANK | |
1H1K | 1H1K | IJKLMN | 1906 | 953 | 10.0 | 9-26-02 | BLUETONGUE VIRUS,BLUETONGUE VIRUS,BLUETONGUE VIRUS,BLUETONGUE VIRUS,BLUETONGUE VIRUS,BLUETONGUE VIRUS | THE BLUETONGUE VIRUS (BTV) CORE BINDS DSRNA | J.M.DIPROSE,J.M.GRIMES,G.C.SUTTON,J.N.BURROUGHS,A.MEYER, S.MAAN,P.P.C.MERTENS,D.I.STUART | |
4FAW | 4FAW | AB | 392 | 183 | 2.7 | 11-14-12 | OCEANOBACILLUS IHEYENSIS,synthetic | STRUCTURE OF OCEANOBACILLUS IHEYENSIS GROUP II INTRON IN THE PRESENCE OF K+, MG2+ AND A HYDROLYZED OLIGONUCLEOTIDE FRAGMENT | M.MARCIA,A.M.PYLE | 4FAU 3G78 4E8N 4E8Q 3IGI 4E8K 4FAR 4E8T 4FB0 3BWP 4E8P 4FAQ 4E8M 4E8R 3EOH 4DS6 4FAX 3EOG 4E8V Compare |
3IZ4 | 3IZ4 | A | 377 | 105 | 13.6 | 10-20-10 | ESCHERICHIA COLI | MODIFIED E. COLI TMRNA IN THE RESUME STATE WITH THE TRNA-LIKE DOMAIN IN THE RIBOSOMAL P SITE INTERACTING WITH THE SMPB | Y.HASHEM,J.FU,J.FRANK | |
3IYR | 3IYR | A | 349 | 54 | 13.0 | 10-20-10 | THERMUS THERMOPHILUS | TMRNA-SMPB: A JOURNEY TO THE CENTER OF THE BACTERIAL RIBOSOME | F.WEIS,P.BRON,E.GIUDICE,J.P.ROLLAND,D.THOMAS,B.FELDEN,R.GILLET | |
3IYQ | 3IYQ | A | 349 | 58 | 13.0 | 10-20-10 | THERMUS THERMOPHILUS | TMRNA-SMPB: A JOURNEY TO THE CENTER OF THE BACTERIAL RIBOSOME | F.WEIS,P.BRON,E.GIUDICE,J.P.ROLLAND,D.THOMAS,B.FELDEN,R.GILLET | |
3Q1Q | 3Q1Q | BC | 423 | 175 | 3.8 | 3-09-11 | synthetic,synthetic | STRUCTURE OF A BACTERIAL RIBONUCLEASE P HOLOENZYME IN COMPLEX WITH TRNA | N.J.REITER,A.OSTERMAN,A.TORRES-LARIOS,K.K.SWINGER,T.PAN,A.MONDRAGON | 3Q1R 2A2E Compare |
2A64 | 2A64 | A | 298 | 117 | 3.3 | 9-20-05 | synthetic | CRYSTAL STRUCTURE OF BACTERIAL RIBONUCLEASE P RNA | A.V.KAZANTSEV,A.A.KRIVENKO,D.J.HARRINGTON,S.R.HOLBROOK, P.D.ADAMS,N.R.PACE | |
2J37 | 2J37 | AZ | 408 | 164 | 8.0 | 11-08-06 | HALOARCULA MARISMORTUI,TRITICUM SP. | MODEL OF MAMMALIAN SRP BOUND TO 80S RNCS | M.HALIC,M.BLAU,T.BECKER,T.MIELKE,M.R.POOL,K.WILD,I.SINNING, R.BECKMANN | |
1X8W | 1X8W | A | 242 | 95 | 3.8 | 11-09-04 | synthetic | STRUCTURE OF THE TETRAHYMENA RIBOZYME: BASE TRIPLE SANDWICH AND METAL ION AT THE ACTIVE SITE | F.GUO,A.R.GOODING,T.R.CECH | 1GRZ Compare |
2RKJ | 2RKJ | CDGH | 968 | 318 | 4.5 | 1-08-08 | NEUROSPORA CRASSA,STAPHYLOCOCCUS PHAGE TWORT | COCRYSTAL STRUCTURE OF A TYROSYL-TRNA SYNTHETASE SPLICING FACTOR WITH A GROUP I INTRON RNA | P.J.PAUKSTELIS,J.-H.CHEN,E.CHASE,A.M.LAMBOWITZ,B.L.GOLDEN | |
3J16 | 3J16 | JKL | 463 | 117 | 10.0 | 2-22-12 | SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE | MODELS OF RIBOSOME-BOUND DOM34P AND RLI1P AND THEIR RIBOSOMAL BINDING PARTNERS | T.BECKER,S.FRANCKENBERG,S.WICKLES,C.J.SHOEMAKER,A.M.ANGER,J.- P.ARMACHE,H.SIEBER,C.UNGEWICKELL,O.BERNINGHAUSEN,I.DABERKOW, A.KARCHER,M.THOMM,K.-P.HOPFNER,R.GREEN,R.BECKMANN | |
1Y0Q | 1Y0Q | AB | 233 | 92 | 3.6 | 12-21-04 | STAPHYLOCOCCUS PHAGE TWORT,synthetic | CRYSTAL STRUCTURE OF AN ACTIVE GROUP I RIBOZYME-PRODUCT COMPLEX | B.L.GOLDEN,H.KIM,E.CHASE | |
3DHS | 3DHS | A | 215 | 80 | 3.6 | 1-27-09 | synthetic | MAPPING METAL-BINDING SITES IN THE CATALYTIC DOMAIN OF BACTERIAL RNASE P RNA | N.R.PACE,A.V.KAZANTSEV,A.A.KRIVENKO | |
1U6B | 1U6B | BCD | 219 | 108 | 3.1 | 8-10-04 | synthetic,synthetic,synthetic | CRYSTAL STRUCTURE OF A SELF-SPLICING GROUP I INTRON WITH BOTH EXONS | P.L.ADAMS,M.R.STAHLEY,A.B.KOSEK,J.WANG,S.A.STROBEL | 3BO2 3IIN 3BO3 3BO4 1ZZN Compare |
4GMA | 4GMA | Z | 192 | 82 | 3.9 | 10-17-12 | MARINE METAGENOME | CRYSTAL STRUCTURE OF THE ADENOSYLCOBALAMIN RIBOSWITCH | F.E.REYES,J.E.JOHNSON,J.T.POLASKI,R.T.BATEY | |
2NOQ | 2NOQ | ABCDE | 317 | 115 | 7.3 | 11-21-06 | synthetic,SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE | STRUCTURE OF RIBOSOME-BOUND CRICKET PARALYSIS VIRUS IRES RNA | M.SCHULER,S.R.CONNELL,A.LESCOUTE,J.GIESEBRECHT,M.DABROWSKI, B.SCHROEER,T.MIELKE,P.A.PENCZEK,E.WESTHOF,C.M.T.SPAHN | |
3DIR | 3DIR | A | 172 | 81 | 2.9 | 9-16-08 | synthetic | CRYSTALLIZATION OF THE THERMOTOGA MARITIMA LYSINE RIBOSWITCH BOUND TO N6-1-IMINOETHYL-L-LYSINE | A.A.SERGANOV | 3DIL 3DJ2 3DIQ 3DIX 3DIG 3DJ0 3DIS 3DIM 3DIY 3DIZ 3DIO Compare |
3P49 | 3P49 | A | 169 | 48 | 3.5 | 4-06-11 | synthetic | CRYSTAL STRUCTURE OF A GLYCINE RIBOSWITCH FROM FUSOBACTERIUM NUCLEATUM | E.B.BUTLER,J.WANG,Y.XIONG,S.STROBEL | |
3D0U | 3D0U | A | 161 | 76 | 2.8 | 7-01-08 | synthetic | CRYSTAL STRUCTURE OF LYSINE RIBOSWITCH BOUND TO LYSINE | A.D.GARST,A.HEROUX,R.P.RAMBO,R.T.BATEY | 4ERJ 4ERL 3D0X Compare |
2QBZ | 2QBZ | X | 153 | 73 | 2.6 | 9-18-07 | synthetic | STRUCTURE OF THE M-BOX RIBOSWITCH APTAMER DOMAIN | C.E.DANN III,W.C.WINKLER | 3PDR Compare |
4GXY | 4GXY | A | 160 | 62 | 3.0 | 10-17-12 | synthetic | RNA STRUCTURE | A.SERGANOV,A.PESELIS | |
1GID | 1GID | AB | 316 | 153 | 2.5 | 12-31-96 | SYNTHETIC CONSTRUCT | CRYSTAL STRUCTURE OF A GROUP I RIBOZYME DOMAIN: PRINCIPLES OF RNA PACKING | J.H.CATE,A.R.GOODING,E.PODELL,K.ZHOU,B.L.GOLDEN,C.E.KUNDROT, T.R.CECH,J.A.DOUDNA | 1HR2 2R8S 1L8V Compare |
1U9S | 1U9S | A | 155 | 75 | 2.9 | 10-26-04 | synthetic | CRYSTAL STRUCTURE OF THE SPECIFICITY DOMAIN OF RIBONUCLEASE P OF THE A-TYPE | A.S.KRASILNIKOV,Y.XIAO,T.PAN,A.MONDRAGON | |
4A1C | 4A1C | 23 | 274 | 86 | 3.5 | 11-30-11 | TETRAHYMENA THERMOPHILA,TETRAHYMENA THERMOPHILA | T.THERMOPHILA 60S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 6. THIS FILE CONTAINS 5S RRNA, 5.8S RRNA AND PROTEINS OF MOLECULE 4. | S.KLINGE,F.VOIGTS-HOFFMANN,M.LEIBUNDGUT,S.ARPAGAUS,N.BAN | 4A1E 4A1A 4A17 Compare |
1NBS | 1NBS | AB | 270 | 117 | 3.1 | 2-18-03 | BACILLUS SUBTILIS | CRYSTAL STRUCTURE OF THE SPECIFICITY DOMAIN OF RIBONUCLEASE P RNA | A.S.KRASILNIKOV,X.YANG,T.PAN,A.MONDRAGON | |
2NZ4 | 2NZ4 | GHRS | 594 | 243 | 2.5 | 1-16-07 | synthetic,synthetic | STRUCTURAL INVESTIGATION OF THE GLMS RIBOZYME BOUND TO ITS CATALYTIC COFACTOR | J.C.COCHRANE | 3G96 3L3C 3G8T 3G9C 3G8S Compare |
3IZD | 3IZD | A | 138 | 59 | 10.0 | 12-01-10 | SACCHAROMYCES CEREVISIAE | MODEL OF THE LARGE SUBUNIT RNA EXPANSION SEGMENT ES27L-OUT BASED ON A 6.1 A CRYO-EM MAP OF SACCHAROMYCES CEREVISIAE TRANSLATING 80S RIBOSOME. 3IZD IS A SMALL PART (AN EXPANSION SEGMENT) WHICH IS IN AN ALTERNATIVE CONFORMATION TO WHAT IS IN ALREADY 3IZF. | J.-P.ARMACHE,A.JARASCH,A.M.ANGER,E.VILLA,T.BECKER,S.BHUSHAN, F.JOSSINET,M.HABECK,G.DINDAR,S.FRANCKENBERG,V.MARQUEZ,T.MIELKE, M.THOMM,O.BERNINGHAUSEN,B.BEATRIX,J.SOEDING,E.WESTHOF,D.N.WILSON, R.BECKMANN | |
1LNG | 1LNG | B | 97 | 44 | 2.3 | 6-07-02 | METHANOCALDOCOCCUS JANNASCHII | CRYSTAL STRUCTURE OF THE SRP19-7S.S SRP RNA COMPLEX OF M. JANNASCHII | T.HAINZL,S.HUANG,A.E.SAUER-ERIKSSON | 2V3C 3NDB 1Z43 Compare |
3IVK | 3IVK | C | 256 | 114 | 3.1 | 3-02-10 | synthetic | CRYSTAL STRUCTURE OF THE CATALYTIC CORE OF AN RNA POLYMERASE RIBOZYME COMPLEXED WITH AN ANTIGEN BINDING ANTIBODY FRAGMENT | Y.KOLDOBSKAYA,E.M.DUGUID,D.M.SHECHNER,S.KOIDE, A.A.KOSSIAKOFF,D.P.BARTEL,J.A.PICCIRILLI | 3HHN 3R1L 3R1H Compare |
2IL9 | 2IL9 | AM | 267 | 49 | 3.1 | 2-13-07 | synthetic | CRYSTAL STRUCTURE OF PLAUTIA STALI INTESTINE VIRUS INTERGENIC REGION INTERNAL RIBOSOME ENTRY SITE RIBOSOMAL BINDING DOMAIN RNA AT 3.1 ANGSTROMS | J.S.PFINGSTEN,D.A.COSTANTINO,J.S.KIEFT | |
1MFQ | 1MFQ | A | 127 | 53 | 3.1 | 9-20-02 | HOMO SAPIENS | CRYSTAL STRUCTURE ANALYSIS OF A TERNARY S-DOMAIN COMPLEX OF HUMAN SIGNAL RECOGNITION PARTICLE | A.KUGLSTATTER,C.OUBRIDGE,K.NAGAI | 2GO5 3KTV 1RY1 1L9A Compare |
3V7E | 3V7E | D | 249 | 110 | 2.8 | 3-07-12 | CALDANAEROBACTER SUBTERRANEUS SUBSP. | CRYSTAL STRUCTURE OF YBXF BOUND TO THE SAM-I RIBOSWITCH APTAMER | N.J.BAIRD,J.ZHANG,T.HAMMA,A.R.FERRE-D'AMARE | |
2HO7 | 2HO7 | AB | 141 | 64 | 2.9 | 9-26-06 | synthetic,synthetic | PRE-CLEAVAGE STATE OF THE THERMOANAEROBACTER TENGCONGENSIS GLMS RIBOZYME BOUND TO GLUCOSE-6-PHOSPHATE | D.J.KLEIN,A.R.FERRE-D'AMARE | 2Z75 2H0X 2GCS 2GCV 2Z74 2H0W 3B4B 2H0S 3B4A 2HO6 2H0Z 3B4C Compare |
1C2X | 1C2X | C | 120 | 35 | 7.5 | 4-10-00 | ESCHERICHIA COLI | S RRNA STRUCTURE FITTED TO A CRYO-ELECTRON MICROSCOPIC MAP AT 7.5 ANGSTROMS RESOLUTION | R.BRIMACOMBE,F.MUELLER | |
3NPB | 3NPB | A | 119 | 47 | 3.0 | 11-03-10 | BACILLUS SUBTILIS | TL5 RNA STRUCTURE | C.LU | |
3IZZ | 3IZZ | ABDE | 337 | 122 | 10.8 | 3-30-11 | ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI | MODELS FOR RIBOSOME COMPONENTS THAT ARE NEAREST NEIGHBORS TO THE BOVINE MITOCHONDRIAL INITIATION FACTOR2 BOUND TO THE E. COLI RIBOSOME | A.S.YASSIN,E.HAQUE,P.P.DATTA,K.ELMORE,N.K.BANAVALI,L.L.SPREMULLI, R.K.AGRAWAL | |
3J0Q | 3J0Q | GWdg | 600 | 181 | 10.6 | 11-16-11 | ORYCTOLAGUS CUNICULUS,ORYCTOLAGUS CUNICULUS,ORYCTOLAGUS CUNICULUS,ORYCTOLAGUS CUNICULUS,ORYCTOLAGUS CUNICULUS,ORYCTOLAGUS CUNICULUS,ORYCTOLAGUS CUNICULUS,ORYCTOLAGUS CUNICULUS,ORYCTOLAGUS CUNICULUS,ORYCTOLAGUS CUNICULUS,ORYCTOLAGUS CUNICULUS,ORYCTOLAGUS CUNICULUS,ORYCTOLAGUS CUNICULUS,ORYCTOLAGUS CUNICULUS | CORE OF MAMMALIAN 80S PRE-RIBOSOME IN COMPLEX WITH TRNAS FITTED TO A 10.6A CRYO-EM MAP: ROTATED PRE STATE 2 | T.BUDKEVICH,J.GIESEBRECHT,R.ALTMAN,J.MUNRO,T.MIELKE,K.NIERHAUS, S.BLANCHARD,C.M.SPAHN | 3J0P 3J0L 3J0O Compare |
2LKR | 2LKR | A | 1110 | 298 | SOLUTION NMR | 2-22-12 | synthetic | YEAST U2/U6 COMPLEX | J.E.BURKE,D.G.SASHITAL,X.ZUO,Y.WANG,S.E.BUTCHER | |
1FOQ | 1FOQ | A | 545 | 200 | 20.0 | 12-22-00 | BACILLUS PHAGE PHI29 | PENTAMERIC MODEL OF THE BACTERIOPHAGE PHI29 PROHEAD RNA | A.A.SIMPSON,Y.TAO,P.G.LEIMAN,M.O.BADASSO,Y.HE,P.J.JARDINE, N.H.OLSON,M.C.MORAIS,S.GRIMES,D.L.ANDERSON,T.S.BAKER, M.G.ROSSMANN | |
3F4G | 3F4G | XY | 109 | 51 | 3.0 | 1-27-09 | synthetic,synthetic | CRYSTAL STRUCTURE OF THE FMN RIBOSWITCH BOUND TO RIBOFLAVIN. | A.A.SERGANOV,L.HUANG | 3F4E 3F2Q 3F2Y 3F4H 3F2W 3F30 3F2X 3F2T 2YIE 2YIF Compare |
2KRL | 2KRL | A | 102 | 22 | SOLUTION NMR; SOLUTION SCATTERING | 2-09-11 | TURNIP CRINKLE VIRUS | THE ENSEMBLE OF THE SOLUTION GLOBAL STRUCTURES OF THE 102-NT RIBOSOME BINDING STRUCTURE ELEMENT OF THE TURNIP CRINKLE VIRUS 3' UTR RNA | X.ZUO,J.WANG,P.YU,D.EYLER,H.XU,M.STARICH,D.TIEDE,A.SIMON,W.KASPRZAK, C.SCHWIETERS,B.SHAPIRO | |
2XXA | 2XXA | G | 204 | 80 | 3.9 | 3-02-11 | DEINOCOCCUS RADIODURANS | THE CRYSTAL STRUCTURE OF THE SIGNAL RECOGNITION PARTICLE (SRP) IN COMPLEX WITH ITS RECEPTOR(SR) | S.F.ATAIDE,N.SCHMITZ,K.SHEN,A.KE,S.SHAN,J.A.DOUDNA,N.BAN | |
4FRN | 4FRN | A | 204 | 76 | 3.4 | 10-17-12 | MARINE METAGENOME | CRYSTAL STRUCTURE OF THE COBALAMIN RIBOSWITCH REGULATORY ELEMENT | F.E.REYES,J.E.JOHNSON,J.T.POLASKI,R.T.BATEY | |
1S9S | 1S9S | A | 2020 | 754 | SOLUTION NMR | 4-06-04 | synthetic | SOLUTION STRUCTURE OF MLV PSI SITE | V.D'SOUZA,A.DEY,D.HABIB,M.F.SUMMERS | |
1YSH | 1YSH | ABF | 162 | 65 | 9.5 | 7-05-05 | synthetic,synthetic,synthetic | LOCALIZATION AND DYNAMIC BEHAVIOR OF RIBOSOMAL PROTEIN L30E | M.HALIC,T.BECKER,J.FRANK,C.M.SPAHN,R.BECKMANN | |
3SUX | 3SUX | X | 100 | 36 | 2.9 | 9-14-11 | synthetic | CRYSTAL STRUCTURE OF THF RIBOSWITCH, BOUND WITH THF | L.HUANG,A.SERGANOV,D.J.PATEL | 3SUY 3SUH Compare |
2GTT | 2GTT | W | 198 | 0 | 3.5 | 9-19-06 | synthetic,synthetic | CRYSTAL STRUCTURE OF THE RABIES VIRUS NUCLEOPROTEIN-RNA COMPLEX | A.A.V.ALBERTINI,A.K.WERNIMONT,T.MUZIOL,R.B.G.RAVELLI, W.WEISSENHORN,R.W.H.RUIGROK | |
3W3S | 3W3S | B | 98 | 38 | 3.1 | 2-13-13 | AQUIFEX AEOLICUS VF5 | CRYSTAL STRUCTURE OF A. AEOLICUS TRNASEC IN COMPLEX WITH M. KANDLERI SERRS | Y.ITOH,S.SEKINE,S.YOKOYAMA | |
3KTW | 3KTW | C | 96 | 35 | 3.2 | 2-16-10 | SULFOLOBUS SOLFATARICUS | CRYSTAL STRUCTURE OF THE SRP19/S-DOMAIN SRP RNA COMPLEX OF SULFOLOBUS SOLFATARICUS | K.WILD,G.BANGE,G.BOZKURT,I.SINNING | |
2PXV | 2PXV | B | 49 | 22 | 2.0 | 8-07-07 | synthetic | VARIANT 6 OF RIBONUCLEOPROTEIN CORE OF THE E. COLI SIGNAL RECOGNITION PARTICLE | A.Y.KEEL,R.P.RAMBO,R.T.BATEY,J.S.KIEFT | 2PXK 2PXD 2PXQ 2PXB 2PXT 2PXP 2PXE 1DUL 3LQX 1HQ1 2PXU 2PXF 2PXL 2XKV Compare |
2OM7 | 2OM7 | ABCDFGHIJM | 455 | 151 | 7.3 | 1-15-08 | THERMUS THERMOPHILUS,THERMUS THERMOPHILUS,THERMUS THERMOPHILUS,THERMUS THERMOPHILUS,THERMUS THERMOPHILUS,THERMUS THERMOPHILUS,THERMUS THERMOPHILUS,THERMUS THERMOPHILUS,THERMUS THERMOPHILUS,THERMUS THERMOPHILUS | STRUCTURAL BASIS FOR INTERACTION OF THE RIBOSOME WITH THE SWITCH REGIONS OF GTP-BOUND ELONGATION FACTORS | S.R.CONNELL,D.N.WILSON,M.ROST,M.SCHUELER,J.GIESEBRECHT, M.DABROWSKI,T.MIELKE,P.FUCINI,C.M.T.SPAHN | |
3GX5 | 3GX5 | A | 94 | 44 | 2.4 | 1-12-10 | synthetic | CRYSTAL STRUCTURE OF T. TENCONGENSIS SAM-I RIBOSWITCH VARIANT A94G/U34 BOUND WITH SAM | R.K.MONTANGE,R.T.BATEY | 2GIS 3GX6 3IQR 3GX2 3IQP 3IQN 3GX3 3GX7 2YDH Compare |
4AOB | 4AOB | A | 94 | 43 | 3.0 | 5-09-12 | THERMOANAEROBACTER TENGCONGENSIS | SAM-I RIBOSWITCH CONTAINING THE T. SOLENOPSAE KT-23 IN COMPLEX WITH S-ADENOSYL METHIONINE | K.T.SCHROEDER,P.DALDROP,S.A.MCPHEE,D.M.J.LILLEY | |
1U6P | 1U6P | B | 2000 | 727 | SOLUTION NMR | 11-02-04 | MOLONEY MURINE LEUKEMIA VIRUS | NMR STRUCTURE OF THE MLV ENCAPSIDATION SIGNAL BOUND TO THE NUCLEOCAPSID PROTEIN | V.D'SOUZA,M.F.SUMMERS | |
4B5R | 4B5R | A | 94 | 41 | 3.0 | 1-30-13 | THERMOANAEROBACTER TENGCONGENSIS | SAM-I RIBOSWITCH BEARING THE H. MARISMORTUI K-T-7 | P.DALDROP,D.M.J.LILLEY | |
3IWN | 3IWN | A | 93 | 36 | 3.2 | 11-10-09 | synthetic | CO-CRYSTAL STRUCTURE OF A BACTERIAL C-DI-GMP RIBOSWITCH | N.KULSHINA,N.J.BAIRD,A.R.FERRE-D'AMARE | |
3ADD | 3ADD | C | 176 | 73 | 2.4 | 7-28-10 | METHANOPYRUS KANDLERI | CRYSTAL STRUCTURE OF O-PHOSPHOSERYL-TRNA KINASE COMPLEXED WITH SELENOCYSTEINE TRNA AND AMPPNP (CRYSTAL TYPE 3) | Y.ITOH,S.CHIBA,S.SEKINE,S.YOKOYAMA | 3ADB Compare |
3CUN | 3CUN | C | 91 | 34 | 3.0 | 6-24-08 | HOMO SAPIENS | AMINOACYL-TRNA SYNTHETASE RIBOZYME | H.XIAO,H.MURAKAMI,H.SUGA,A.R.FERRE-D'AMARE | 3CUL Compare |
1M5O | 1M5O | DE | 224 | 94 | 2.2 | 10-12-02 | synthetic,synthetic | TRANSITION STATE STABILIZATION BY A CATALYTIC RNA | P.B.RUPERT,A.P.MASSEY,S.T.SIGURDSSON,A.R.FERRE-D'AMARE | 1M5V 1M5K 1M5P Compare |
3ADC | 3ADC | C | 180 | 70 | 2.9 | 7-28-10 | METHANOPYRUS KANDLERI | CRYSTAL STRUCTURE OF O-PHOSPHOSERYL-TRNA KINASE COMPLEXED WITH SELENOCYSTEINE TRNA AND AMPPNP (CRYSTAL TYPE 2) | Y.ITOH,S.CHIBA,S.SEKINE,S.YOKOYAMA | |
3UCZ | 3UCZ | DR | 93 | 43 | 2.8 | 1-04-12 | synthetic,synthetic | THE C-DI-GMP-I RIBOSWITCH BOUND TO GPG | K.D.SMITH,S.A.STROBEL | 3UCU 3UD3 3MXH 3MUR 3UD4 3MUV 3MUM 3IRW 3MUT Compare |
3SD3 | 3SD3 | A | 89 | 40 | 1.9 | 9-21-11 | synthetic | THE STRUCTURE OF THE TETRAHYDROFOLATE RIBOSWITCH CONTAINING A U25C MUTATION | F.E.REYES,J.J.TRAUSCH,P.CERES,R.T.BATEY | 3SD1 Compare |
1WZ2 | 1WZ2 | D | 176 | 66 | 3.2 | 9-06-05 | synthetic | THE CRYSTAL STRUCTURE OF LEUCYL-TRNA SYNTHETASE AND TRNA(LEUCINE) COMPLEX | R.FUKUNAGA,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | |
1DUH | 1DUH | A | 88 | 38 | 2.7 | 5-08-00 | synthetic | CRYSTAL STRUCTURE OF THE CONSERVED DOMAIN IV OF E. COLI 4.5S RNA | L.JOVINE,T.HAINZL,C.OUBRIDGE,W.G.SCOTT,J.LI,T.K.SIXMA, A.WONACOTT,T.SKARZYNSKI,K.NAGAI | |
3OWZ | 3OWZ | AB | 168 | 79 | 3.0 | 12-29-10 | synthetic,synthetic | CRYSTAL STRUCTURE OF GLYCINE RIBOSWITCH, SOAKED IN IRIDIUM | L.HUANG,A.SERGANOV,D.J.PATEL | 3OX0 3OXJ 3OWW 3OXM 3OXE 3OXD 3OWI 3OXB Compare |
3RG5 | 3RG5 | A | 172 | 71 | 2.0 | 6-08-11 | MUS MUSCULUS | CRYSTAL STRUCTURE OF MOUSE TRNA(SEC) | M.C.WAHL,O.M.GANICHKIN,E.A.ANEDCHENKO | 3A3A 3HL2 Compare |
2HOJ | 2HOJ | A | 74 | 34 | 2.5 | 9-19-06 | synthetic | CRYSTAL STRUCTURE OF AN E. COLI THI-BOX RIBOSWITCH BOUND TO THIAMINE PYROPHOSPHATE, MANGANESE IONS | T.E.EDWARDS,A.R.FERRE-D'AMARE | 2HOO 2HOL 2HOK 3K0J 2HOM 2HOP Compare |
4FRG | 4FRG | B | 84 | 32 | 3.0 | 10-17-12 | MARINE METAGENOME | CRYSTAL STRUCTURE OF THE COBALAMIN RIBOSWITCH APTAMER DOMAIN | F.E.REYES,J.E.JOHNSON,J.T.POLASKI,R.T.BATEY | |
2ZZM | 2ZZM | B | 84 | 27 | 2.6 | 9-15-09 | synthetic | THE COMPLEX STRUCTURE OF ATRM5 AND TRNALEU | S.GOTO-ITO,T.ITO,S.YOKOYAMA | |
4AQ7 | 4AQ7 | B | 154 | 67 | 2.5 | 6-13-12 | ESCHERICHIA COLI | TERNARY COMPLEX OF E. COLI LEUCYL-TRNA SYNTHETASE, TRNA(LEU) AND LEUCYL-ADENYLATE ANALOGUE IN THE AMINOACYLATION CONFORMATION | A.PALENCIA,T.CREPIN,M.T.VU,T.L.LINCECUM JR,S.A.MARTINIS, S.CUSACK | 3ZGZ 4ARI 4AS1 4ARC 2NQP Compare |
3T4B | 3T4B | A | 82 | 34 | 3.5 | 10-12-11 | HEPATITIS C VIRUS, SYNTHETIC CONSTRUCT | CRYSTAL STRUCTURE OF THE HCV IRES PSEUDOKNOT DOMAIN | K.E.BERRY,S.WAGHRAY,S.A.MORTIMER,Y.BAI,J.A.DOUDNA | |
3AM1 | 3AM1 | B | 81 | 34 | 2.4 | 12-29-10 | synthetic | CRYSTAL STRUCTURE OF O-PHOSPHOSERYL-TRNA KINASE COMPLEXED WITH ANTICODON-STEM/LOOP TRUNCATED TRNA(SEC) | Y.ARAISO,R.ISHITANI,O.NUREKI | |
3UMY | 3UMY | B | 80 | 38 | 1.9 | 10-31-12 | THERMUS THERMOPHILUS | CRYSTAL STRUCTURE OF MUTANT RIBOSOMAL PROTEIN T217A TTHL1 IN COMPLEX WITH 80NT 23S RNA FROM THERMUS THERMOPHILUS | A.G.GABDULKHAKOV,N.A.NEVSKAYA,S.V.NIKONOV | 3U4M 3U56 Compare |
3AMU | 3AMU | B | 78 | 28 | 3.1 | 10-19-11 | ARCHAEOGLOBUS FULGIDUS | CRYSTAL STRUCTURE OF THE TIAS-TRNA(ILE2)-AMPCPP-AGMATINE COMPLEX | T.NUMATA,T.OSAWA | 3AMT Compare |
2GDI | 2GDI | XY | 156 | 74 | 2.0 | 7-04-06 | synthetic | CRYSTAL STRUCTURE OF THIAMINE PYROPHOSPHATE-SPECIFIC RIBOSWITCH IN COMPLEX WITH THIAMINE PYROPHOSPHATE | A.SERGANOV | |
2BTE | 2BTE | BE | 156 | 69 | 2.9 | 9-15-05 | THERMUS THERMOPHILUS | THERMUS THERMOPHILUS LEUCYL-TRNA SYNTHETASE COMPLEXED WITH WITH A TRNALEU TRANSCRIPT IN THE POST-EDITING CONFORMATION AND A POST-TRANSFER EDITING SUBSTRATE ANALOGUE | S.CUSACK,M.TUKALO,A.YAREMCHUK,R.FUKUNAGA,S.YOKOYAMA | 2V0G 2BYT Compare |
1P5P | 1P5P | A | 77 | 28 | SOLUTION NMR | 11-04-03 | synthetic | SOLUTION STRUCTURE OF HCV IRES DOMAIN II (MINIMIZED AVERAGE STRUCTURE) | P.J.LUKAVSKY,I.KIM,G.A.OTTO,J.D.PUGLISI | 1P5O Compare |
3QSY | 3QSY | D | 77 | 9 | 3.2 | 3-21-12 | ESCHERICHIA COLI | RECOGNITION OF THE METHIONYLATED INITIATOR TRNA BY THE TRANSLATION INITIATION FACTOR 2 IN ARCHAEA | O.S.NIKONOV,E.A.STOLBOUSHKINA,N.V.ZELINSKAYA,A.D.NIKULIN,M.B.GARBER, S.V.NIKONOV | |
3D2V | 3D2V | A | 154 | 71 | 2.0 | 7-01-08 | ARABIDOPSIS THALIANA | STRUCTURE OF THE EUKARYOTIC TPP-SPECIFIC RIBOSWITCH BOUND TO THE ANTIBACTERIAL COMPOUND PYRITHIAMINE PYROPHOSPHATE | S.THORE,C.FRICK,N.BAN | 3D2X 3D2G 2CKY Compare |
1J2B | 1J2B | CD | 148 | 40 | 3.3 | 5-27-03 | synthetic | CRYSTAL STRUCTURE OF ARCHAEOSINE TRNA-GUANINE TRANSGLYCOSYLASE COMPLEXED WITH LAMBDA-FORM TRNA(VAL) | R.ISHITANI,O.NUREKI,N.NAMEKI,N.OKADA,S.NISHIMURA,S.YOKOYAMA, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | |
1H3E | 1H3E | B | 77 | 31 | 2.9 | 10-27-02 | THERMUS THERMOPHILUS | TYROSYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED WITH WILD-TYPE TRNATYR(GUA) AND WITH ATP AND TYROSINOL | S.CUSACK,A.YAREMCHUK,I.KRIKLIVYI,M.TUKALO | |
3A2K | 3A2K | C | 154 | 52 | 3.6 | 10-20-09 | synthetic | CRYSTAL STRUCTURE OF TILS COMPLEXED WITH TRNA | K.NAKANISHI,L.BONNEFOND,R.ISHITANI,O.NUREKI | |
1I9V | 1I9V | A | 73 | 29 | 2.6 | 6-04-01 | SACCHAROMYCES CEREVISIAE | CRYSTAL STRUCTURE ANALYSIS OF A TRNA-NEOMYCIN COMPLEX | N.E.MIKKELSEN,K.JOHANSSON,A.VIRTANEN,L.A.KIRSEBOM | 1ZO3 1ZO1 1FCW 1EHZ 6TNA 1OB5 1TRA 4TRA 1MJ1 1TN1 1TN2 1EVV 1SZ1 1ML5 1OB2 1TTT 4TNA Compare |
1EIY | 1EIY | C | 76 | 27 | 3.3 | 3-06-00 | THERMUS THERMOPHILUS HB8 | THE CRYSTAL STRUCTURE OF PHENYLALANYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED WITH COGNATE TRNAPHE | Y.GOLDGUR,L.MOSYAK,L.RESHETNIKOVA,V.ANKILOVA,M.SAFRO | 2IY5 Compare |
2K4C | 2K4C | A | 76 | 30 | SOLUTION NMR; SOLUTION SCATTERING | 12-09-08 | ESCHERICHIA COLI | TRNAPHE-BASED HOMOLOGY MODEL FOR TRNAVAL REFINED AGAINST BASE N-H RDCS IN TWO MEDIA AND SAXS DATA | A.GRISHAEV,J.YING,M.D.CANNY,A.PARDI,A.BAX | |
3IZY | 3IZY | N | 76 | 4 | 10.8 | 3-23-11 | BOS TAURUS | MAMMALIAN MITOCHONDRIAL TRANSLATION INITIATION FACTOR 2 | A.S.YASSIN,E HAQUE,P.P DATTA,K ELMORE,N.K.BANAVALI,L.L.SPREMULLI, R.K.AGRAWAL | |
2NR0 | 2NR0 | E | 272 | 99 | 3.9 | 5-15-07 | synthetic | CRYSTAL STRUCTURE OF PSEUDOUDIRINDE SYNTHASE TRUA IN COMPLEX WITH LEUCYL TRNA | S.HUR,R.M.STROUD | |
3DEG | 3DEG | JK | 298 | 115 | 10.0 | 8-19-08 | ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI | COMPLEX OF ELONGATING ESCHERICHIA COLI 70S RIBOSOME AND EF4(LEPA)-GMPPNP | S.R.CONNELL,M.TOPF,Y.QIN,D.N.WILSON,T.MIELKE,P.FUCINI, K.H.NIERHAUS,C.M.T.SPAHN | 3CW5 3CW6 3V11 2FMT Compare |
2CV1 | 2CV1 | D | 150 | 65 | 2.4 | 9-05-06 | synthetic | GLUTAMYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS IN COMPLEX WITH TRNA(GLU), ATP, AND AN ANALOG OF L-GLUTAMATE: A QUATERNARY COMPLEX | S.SEKINE,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | 2DXI 1G59 1N77 1N78 2CV2 2CV0 Compare |
2ZUF | 2ZUF | B | 75 | 30 | 2.3 | 8-18-09 | synthetic | CRYSTAL STRUCTURE OF PYROCOCCUS HORIKOSHII ARGINYL-TRNA SYNTHETASE COMPLEXED WITH TRNA(ARG) | M.KONNO,T.SUMIDA,E.UCHIKAWA,Y.MORI,T.YANAGISAWA,S.SEKINE, S.YOKOYAMA | 2ZUE Compare |
2CSX | 2CSX | C | 75 | 28 | 2.7 | 9-20-05 | synthetic | CRYSTAL STRUCTURE OF AQUIFEX AEOLICUS METHIONYL-TRNA SYNTHETASE COMPLEXED WITH TRNA(MET) | K.NAKANISHI,Y.OGISO,T.NAKAMA,S.FUKAI,O.NUREKI,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | 2CT8 Compare |
2IHX | 2IHX | B | 1500 | 537 | SOLUTION NMR | 1-16-07 | ROUS SARCOMA VIRUS | SOLUTION STRUCTURE OF THE ROUS SARCOMA VIRUS NUCLEOCAPSID PROTEIN:UPSI RNA PACKAGING SIGNAL COMPLEX | J.ZHOU,M.SUMMERS | |
2AKE | 2AKE | B | 72 | 21 | 3.1 | 7-11-06 | BOS TAURUS | STRUCTURE OF HUMAN TRYPTOPHANYL-TRNA SYNTHETASE IN COMPLEX WITH TRNA(TRP) | N.SHEN,L.GUO,B.YANG,Y.JIN,J.DING | 2DR2 Compare |
1QU2 | 1QU2 | T | 75 | 31 | 2.2 | 8-31-99 | STAPHYLOCOCCUS AUREUS | INSIGHTS INTO EDITING FROM AN ILE-TRNA SYNTHETASE STRUCTURE WITH TRNA(ILE) AND MUPIROCIN | L.F.SILVIAN,J.WANG,T.A.STEITZ | 1FFY 1QU3 Compare |
1GAX | 1GAX | D | 150 | 60 | 2.9 | 12-06-00 | synthetic | CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS VALYL-TRNA SYNTHETASE COMPLEXED WITH TRNA(VAL) AND VALYL-ADENYLATE ANALOGUE | S.FUKAI,O.NUREKI,S.SEKINE,A.SHIMADA,J.TAO,D.G.VASSYLYEV, S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | 1IVS Compare |
1QRS | 1QRS | B | 74 | 31 | 2.6 | 12-07-96 | ESCHERICHIA COLI | GLUTAMINYL-TRNA SYNTHETASE MUTANT D235N COMPLEXED WITH GLUTAMINE TRANSFER RNA | J.G.ARNEZ,T.A.STEITZ | 1O0C 1QRT 1QTQ 1GTR 1GTS 1QRU 1O0B 1EUY 1EXD 2RE8 1ZJW 2RD2 1EUQ Compare |
3Q3Z | 3Q3Z | AV | 148 | 66 | 2.5 | 5-11-11 | CLOSTRIDIUM ACETOBUTYLICUM | STRUCTURE OF A C-DI-GMP-II RIBOSWITCH FROM C. ACETOBUTYLICUM BOUND TO C-DI-GMP | K.D.SMITH,C.A.SHANAHAN,E.L.MOORE,A.C.SIMON,S.A.STROBEL | |
1VBY | 1VBY | B | 73 | 31 | 2.9 | 5-18-04 | synthetic | CRYSTAL STRUCTURE OF THE HEPATITIS DELTA VIRUS GEMONIC RIBOZYME PRECURSOR, WITH C75U MUTAION, AND MN2+ BOUND | A.KE,K.ZHOU,F.DING,J.H.D.CATE,J.A.DOUDNA | 1VC7 1VC5 1SJ4 1SJ3 1VBX 1VC0 2OIH 1VBZ 1SJF 1VC6 1DRZ 1CX0 2OJ3 Compare |
1J1U | 1J1U | B | 74 | 31 | 1.9 | 6-03-03 | synthetic | CRYSTAL STRUCTURE OF ARCHAEAL TYROSYL-TRNA SYNTHETASE COMPLEXED WITH TRNA(TYR) AND L-TYROSINE | T.KOBAYASHI,O.NUREKI,R.ISHITANI,M.TUKALO,S.CUSACK, K.SAKAMOTO,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | |
2ZM5 | 2ZM5 | C | 74 | 32 | 2.5 | 4-14-09 | ESCHERICHIA COLI K12 | CRYSTAL STRUCTURE OF TRNA MODIFICATION ENZYME MIAA IN THE COMPLEX WITH TRNA(PHE) | J.SAKAI,M.YAO,S.CHIMNARONK,I.TANAKA | 2ZXU 3FOZ Compare |
2DER | 2DER | D | 145 | 55 | 3.1 | 8-15-06 | synthetic | COCRYSTAL STRUCTURE OF AN RNA SULFURATION ENZYME MNMA AND TRNA-GLU IN THE INITIAL TRNA BINDING STATE | T.NUMATA,Y.IKEUCHI,S.FUKAI,T.SUZUKI,O.NUREKI | 2DET 2DEU Compare |
3AL0 | 3AL0 | E | 74 | 30 | 3.4 | 9-29-10 | synthetic | CRYSTAL STRUCTURE OF THE GLUTAMINE TRANSAMIDOSOME FROM THERMOTOGA MARITIMA IN THE GLUTAMYLATION STATE. | T.ITO,S.YOKOYAMA | 3AKZ Compare |
1U0B | 1U0B | A | 74 | 31 | 2.3 | 11-23-04 | ESCHERICHIA COLI | CRYSTAL STRUCTURE OF CYSTEINYL-TRNA SYNTHETASE BINARY COMPLEX WITH TRNACYS | S.HAUENSTEIN,C.M.ZHANG,Y.M.HOU,J.J.PERONA | |
3TUP | 3TUP | T | 74 | 31 | 3.0 | 11-23-11 | THERMUS THERMOPHILUS | CRYSTAL STRUCTURE OF HUMAN MITOCHONDRIAL PHERS COMPLEXED WITH TRNAPHE IN THE ACTIVE OPEN STATE | M.SAFRO,L.KLIPCAN,N.MOOR,I.FINAROV,N.KESSLER,M.SUKHANOVA | 3B0V Compare |
2D6F | 2D6F | F | 146 | 51 | 3.1 | 7-11-06 | synthetic | CRYSTAL STRUCTURE OF GLU-TRNA(GLN) AMIDOTRANSFERASE IN THE COMPLEX WITH TRNA(GLN) | O.NUREKI | |
3L0U | 3L0U | A | 73 | 30 | 3.0 | 3-16-10 | synthetic | THE CRYSTAL STRUCTURE OF UNMODIFIED TRNAPHE FROM ESCHERICHIA COLI | R.T.BYRNE,A.L.KONEVEGA,M.V.RODNINA,A.A.ANTSON | |
2AZX | 2AZX | C | 144 | 61 | 2.8 | 8-01-06 | synthetic | CHARGED AND UNCHARGED TRNAS ADOPT DISTINCT CONFORMATIONS WHEN COMPLEXED WITH HUMAN TRYPTOPHANYL-TRNA SYNTHETASE | X.L.YANG,F.J.OTERO,K.L.EWALT,J.LIU,M.A.SWAIRJO,C.KOHRER, U.L.RAJBHANDARY,R.J.SKENE,D.E.MCREE,P.SCHIMMEL | |
2ZNI | 2ZNI | C | 144 | 53 | 3.1 | 12-30-08 | synthetic | CRYSTAL STRUCTURE OF PYRROLYSYL-TRNA SYNTHETASE-TRNA(PYL) COMPLEX FROM DESULFITOBACTERIUM HAFNIENSE | K.NOZAWA,Y.ARAISO,D.SOLL,R.ISHITANI,O.NUREKI | |
1Y26 | 1Y26 | X | 71 | 35 | 2.1 | 12-28-04 | VIBRIO VULNIFICUS | A-RIBOSWITCH-ADENINE COMPLEX | A.SERGANOV,Y.R.YUAN,D.J.PATEL | |
2DU3 | 2DU3 | D | 71 | 26 | 2.6 | 3-13-07 | synthetic | CRYSTAL STRUCTURE OF ARCHAEOGLOBUS FULGIDUS O-PHOSPHOSERYL- TRNA SYNTHETASE COMPLEXED WITH TRNACYS AND O-PHOSPHOSERINE | R.FUKUNAGA | 2DU4 2DU5 Compare |
3KFU | 3KFU | K | 278 | 112 | 3.0 | 8-25-10 | THERMUS THERMOPHILUS | CRYSTAL STRUCTURE OF THE TRANSAMIDOSOME | M.BLAISE,M.BAILLY,M.FRECHIN,S.THIRUP,H.D.BECKER,D.KERN | |
2DU6 | 2DU6 | D | 71 | 18 | 3.3 | 3-13-07 | synthetic | CRYSTAL STRUCTURE OF ARCHAEOGLOBUS FULGIDUS O-PHOSPHOSERYL- TRNA SYNTHETASE E418N/E420N MUTANT COMPLEXED WITH TRNAAMBER AND O-PHOSPHOSERINE ("AMBER COMPLEX") | R.FUKUNAGA | |
2L3J | 2L3J | B | 1349 | 588 | SOLUTION NMR | 10-27-10 | RATTUS NORVEGICUS | THE SOLUTION STRUCTURE OF THE ADAR2 DSRBM-RNA COMPLEX REVEALS A SEQUENCE-SPECIFIC READ OUT OF THE MINOR GROOVE | R.STEFL,F.C.OBERSTRASS,F.H.-T.ALLAIN | |
2ZZN | 2ZZN | C | 142 | 59 | 3.0 | 9-15-09 | synthetic | THE COMPLEX STRUCTURE OF ATRM5 AND TRNACYS | S.GOTO-ITO,T.ITO,S.YOKOYAMA | |
2OIU | 2OIU | PQ | 142 | 62 | 2.6 | 3-13-07 | synthetic | L1 RIBOZYME LIGASE CIRCULAR ADDUCT | M.P ROBERTSON,W.G.SCOTT | |
3LA5 | 3LA5 | A | 71 | 35 | 1.7 | 1-26-10 | BACILLUS SUBTILIS | X-RAY CRYSTAL STRUCTURE OF MC6 RNA RIBOSWITCH BOUND TO AZACYTOSINE | M.S.DUNSTAN,D.LEYS | |
2YHQ | 2YHQ | R | 140 | 0 | 3.6 | 1-25-12 | ESCHERICHIA COLI | STRUCTURE OF RESPIRATORY SYNCYTIAL VIRUS NUCLEOCAPSID PROTEIN, P1 CRYSTAL FORM | K.EL OMARI,B.DHALIWAL,J.REN,N.G.A.ABRESCIA,M.LOCKYER,K.L.POWELL, A.R.HAWKINS,D.K.STAMMERS | 2YHP 2YHM Compare |
1KXK | 1KXK | A | 70 | 28 | 3.0 | 3-22-02 | synthetic | CRYSTAL STRUCTURE OF A RNA MOLECULE CONTAINING DOMAIN 5 AND 6 OF THE YEAST AI5G GROUP II SELF-SPLICING INTRON | L.ZHANG,J.A.DOUDNA | |
3IVN | 3IVN | A | 138 | 62 | 2.8 | 1-19-10 | BACILLUS SUBTILIS | STRUCTURE OF THE U65C MUTANT A-RIBOSWITCH APTAMER FROM THE BACILLUS SUBTILIS PBUE OPERON | V.DELFOSSE,P.DAGENAIS,D.CHAUSSE,G.DI TOMASSO,P.LEGAULT | |
3EPH | 3EPH | E | 138 | 48 | 3.0 | 11-04-08 | synthetic | CRYSTALLOGRAPHIC SNAPSHOTS OF EUKARYOTIC DIMETHYLALLYLTRANSFERASE ACTING ON TRNA: INSIGHT INTO TRNA RECOGNITION AND REACTION MECHANISM | R.H.HUANG,C.ZHOU | 3EPJ 3EPK 3EPL Compare |
1QF6 | 1QF6 | B | 69 | 29 | 2.9 | 5-06-99 | ESCHERICHIA COLI | STRUCTURE OF E. COLI THREONYL-TRNA SYNTHETASE COMPLEXED WITH ITS COGNATE TRNA | R.SANKARANARAYANAN,A.C.DOCK-BREGEON,B.REES,D.MORAS | |
3MOJ | 3MOJ | A | 69 | 26 | 2.9 | 8-04-10 | ESCHERICHIA COLI | STRUCTURE OF THE RNA BINDING DOMAIN OF THE BACILLUS SUBTILIS YXIN PROTEIN COMPLEXED WITH A FRAGMENT OF 23S RIBOSOMAL RNA | J.W.HARDIN,Y.HU,D.B.MCKAY | |
1GIX | 1GIX | 1BC | 198 | 71 | 5.5 | 5-04-01 | THERMUS THERMOPHILUS,synthetic,synthetic,synthetic | CRYSTAL STRUCTURE OF THE RIBOSOME AT 5.5 A RESOLUTION. THIS FILE, 1GIX, CONTAINS THE 30S RIBOSOME SUBUNIT, THREE TRNA, AND MRNA MOLECULES. 50S RIBOSOME SUBUNIT IS IN THE FILE 1GIY | M.M.YUSUPOV,G.Z.YUSUPOVA,A.BAUCOM,K.LIEBERMAN,T.N.EARNEST, J.H.D.CATE,H.F.NOLLER | 1JGO 1JGP 1JGQ Compare |
1EFW | 1EFW | C | 126 | 50 | 3.0 | 6-19-00 | ESCHERICHIA COLI | CRYSTAL STRUCTURE OF ASPARTYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED TO TRNAASP FROM ESCHERICHIA COLI | C.BRIAND,A.POTERSZMAN,S.EILER,G.WEBSTER,J.-C.THIERRY,D.MORAS | 1C0A Compare |
2Y9B | 2Y9B | V | 204 | 70 | 3.6 | 5-11-11 | HOMO SAPIENS | STRUCTURE OF THE SPLICEOSOMAL U4 SNRNP CORE DOMAIN | A.K.W.LEUNG,K.NAGAI,J.LI | 2Y9D 2Y9A 2Y9C Compare |
2QUW | 2QUW | AB | 67 | 25 | 2.2 | 7-15-08 | synthetic,synthetic | HAMMERHEAD RIBOZYME G12A MUTANT AFTER CLEAVAGE | Y.I.CHI,W.G.SCOTT,S.H.KIM | 2QUS Compare |
3HAY | 3HAY | EF | 81 | 27 | 5.0 | 6-23-09 | synthetic,synthetic | CRYSTAL STRUCTURE OF A SUBSTRATE-BOUND FULL H/ACA RNP FROM PYROCOCCUS FURIOSUS | K.YE | |
1IL2 | 1IL2 | C | 129 | 56 | 2.6 | 9-28-01 | SACCHAROMYCES CEREVISIAE | CRYSTAL STRUCTURE OF THE E. COLI ASPARTYL-TRNA SYNTHETASE:YEAST TRNAASP:ASPARTYL-ADENYLATE COMPLEX | L.MOULINIER,S.EILER,G.ERIANI,J.GANGLOFF,J.C.THIERRY, K.GABRIEL,W.H.MCCLAIN,D.MORAS | 1ASZ 1ASY Compare |
3FO4 | 3FO4 | A | 63 | 32 | 1.9 | 6-23-09 | synthetic | CRYSTAL STRUCTURE OF GUANINE RIBOSWITCH C74U MUTANT BOUND TO 6-CHLOROGUANINE | S.D.GILBERT,R.T.BATEY | 2XNZ 3GOG 3FO6 4FEO 2EET 3GAO 4FEN 2G9C 4FEP 4FE5 2EEV 3GER 2EES 2EEW 1Y27 3DS7 4FEL 4FEJ 3GES 2EEU 3G4M 3GOT 2B57 Compare |
2TRA | 2TRA | A | 65 | 28 | 3.0 | 11-06-87 | SACCHAROMYCES CEREVISIAE | RESTRAINED REFINEMENT OF TWO CRYSTALLINE FORMS OF YEAST ASPARTIC ACID AND PHENYLALANINE TRANSFER RNA CRYSTALS | E.WESTHOF,P.DUMAS,D.MORAS | 3TRA 1VTQ Compare |
3BBV | 3BBV | z | 67 | 21 | 10.0 | 10-21-08 | THERMUS THERMOPHILUS | THE TRNA(PHE) FITTED INTO THE LOW RESOLUTION CRYO-EM MAP OF THE 50S.NC-TRNA.HSP15 COMPLEX | L.JIANG,J.P.ABRAHAMS | |
3SLQ | 3SLQ | A | 129 | 52 | 2.5 | 8-17-11 | synthetic | CRYSTAL STRUCTURE OF THE 2'- DEOXYGUANOSINE RIBOSWITCH BOUND TO GUANOSINE-5'-MONOPHOSPHATE | O.PIKOVSKAYA,A.POLONSKAIA,D.J.PATEL,A.SERGANOV | 3SLM 3SKZ 3SKI 3SKL 3SKT 3SKR 3SKW Compare |
3RKF | 3RKF | A | 268 | 129 | 2.5 | 8-17-11 | synthetic | CRYSTAL STRUCTURE OF GUANINE RIBOSWITCH C61U/G37A DOUBLE MUTANT BOUND TO THIO-GUANINE | J.BUCK,A.WACKER,E.WARKENTIN,J.WOEHNERT,J.WIRMER-BARTOSCHEK,H.SCHWALBE | |
1B23 | 1B23 | R | 66 | 23 | 2.6 | 12-07-98 | ESCHERICHIA COLI | E. COLI CYSTEINYL-TRNA AND T. AQUATICUS ELONGATION FACTOR EF-TU:GTP TERNARY COMPLEX | P.NISSEN,M.KJELDGAARD,S.THIRUP,J.NYBORG | |
2L1F | 2L1F | AB | 2620 | 1069 | SOLUTION NMR | 10-27-10 | MOLONEY MURINE LEUKEMIA VIRUS,MOLONEY MURINE LEUKEMIA VIRUS | STRUCTURE OF A CONSERVED RETROVIRAL RNA PACKAGING ELEMENT BY NMR SPECTROSCOPY AND CRYO-ELECTRON TOMOGRAPHY | M.F.SUMMERS,R.N.IROBALIEVA,B.TOLBERT,A.SMALLS-MANTY,K.IYALLA, K.LOELIGER,V.D'SOUZA,H.KHANT,M.SCHMID,E.GARCIA,A.TELESNITSKY,W.CHIU, Y.MIYAZAKI | |
3R4F | 3R4F | A | 66 | 23 | 3.5 | 4-20-11 | synthetic | PROHEAD RNA | F.DING,C.LU,W.ZHANO,K.R.RAJASHANKAR,D.L.ANDERSON,P.J.JARDINE, S.GRIMES,A.KE | |
1H4S | 1H4S | T | 65 | 26 | 2.9 | 6-18-01 | THERMUS THERMOPHILUS | PROLYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED WITH TRNAPRO(CGG) AND A PROLYL-ADENYLATE ANALOGUE | A.YAREMCHUK,M.TUKALO,S.CUSACK | 1H4Q Compare |
486D | 486D | CD | 195 | 79 | 7.5 | 10-04-99 | THERMUS THERMOPHILUS,ESCHERICHIA COLI,SACCHAROMYCES CEREVISIAE,THERMUS THERMOPHILUS,THERMUS THERMOPHILUS,synthetic,synthetic | X-RAY CRYSTAL STRUCTURES OF 70S RIBOSOME FUNCTIONAL COMPLEXES | J.H.CATE,M.M.YUSUPOV,G.ZH.YUSUPOVA,T.N.EARNEST,H.F.NOLLER | |
3NKB | 3NKB | AB | 70 | 32 | 1.9 | 9-01-10 | HOMO SAPIENS | A 1.9A CRYSTAL STRUCTURE OF THE HDV RIBOZYME PRECLEAVAGE SUGGESTS BOTH LEWIS ACID AND GENERAL ACID MECHANISMS CONTRIBUTE TO PHOSPHODIESTER CLEAVAGE | J.-H.CHEN,R.YAJIMA,D.M.CHADALAVADA,E.CHASE,P.C.BEVILACQUA,B.L.GOLDEN | |
3EGZ | 3EGZ | B | 64 | 21 | 2.2 | 10-28-08 | synthetic | CRYSTAL STRUCTURE OF AN IN VITRO EVOLVED TETRACYCLINE APTAMER AND ARTIFICIAL RIBOSWITCH | H.XIAO,T.E.EDWARDS,A.R.FERRE-D'AMARE | |
1YFG | 1YFG | A | 64 | 23 | 3.0 | 9-03-97 | SACCHAROMYCES CEREVISIAE | YEAST INITIATOR TRNA | R.BASAVAPPA,P.B.SIGLER | |
2WWA | 2WWA | DEFG | 140 | 45 | 8.9 | 12-08-09 | SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE | CRYO-EM STRUCTURES OF IDLE YEAST SSH1 COMPLEX BOUND TO THE YEAST 80S RIBOSOME | T.BECKER,E.MANDON,S.BHUSHAN,A.JARASCH,J.P.ARMACHE,S.FUNES, F.JOSSINET,J.GUMBART,T.MIELKE,O.BERNINGHAUSEN,K.SCHULTEN, E.WESTHOF,R.GILMORE,R.BECKMANN | 2WW9 Compare |
1F7V | 1F7V | B | 60 | 23 | 2.9 | 6-27-01 | synthetic | CRYSTAL STRUCTURE OF YEAST ARGINYL-TRNA SYNTHETASE COMPLEXED WITH THE TRNAARG | B.DELAGOUTTE,D.MORAS,J.CAVARELLI | 1F7U Compare |
2WWB | 2WWB | DEFG | 136 | 47 | 6.5 | 12-08-09 | TRITICUM AESTIVUM,TRITICUM AESTIVUM,TRITICUM AESTIVUM,TRITICUM AESTIVUM | CRYO-EM STRUCTURE OF THE MAMMALIAN SEC61 COMPLEX BOUND TO THE ACTIVELY TRANSLATING WHEAT GERM 80S RIBOSOME | T.BECKER,E.MANDON,S.BHUSHAN,A.JARASCH,J.P.ARMACHE,S.FUNES, F.JOSSINET,J.GUMBART,T.MIELKE,O.BERNINGHAUSEN,K.SCHULTEN, E.WESTHOF,R.GILMORE,R.BECKMANN | |
3ICQ | 3ICQ | E | 122 | 38 | 3.2 | 8-25-09 | synthetic | KARYOPHERIN NUCLEAR STATE | A.G.COOK,N.FUKUHARA,M.JINEK,E.CONTI | |
1FIR | 1FIR | A | 61 | 22 | 3.3 | 1-17-01 | BOS TAURUS | CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTION PRIMER TRNA(LYS3) | P.BENAS,P.DUMAS | |
1UN6 | 1UN6 | F | 122 | 50 | 3.1 | 11-20-03 | XENOPUS LAEVIS | THE CRYSTAL STRUCTURE OF A ZINC FINGER - RNA COMPLEX REVEALS TWO MODES OF MOLECULAR RECOGNITION | D.LU,M.A.SEARLES,A.KLUG | |
1SER | 1SER | T | 61 | 25 | 2.9 | 4-30-94 | THERMUS THERMOPHILUS | THE 2.9 ANGSTROMS CRYSTAL STRUCTURE OF T. THERMOPHILUS SERYL-TRNA SYNTHETASE COMPLEXED WITH TRNA SER | S.BIOU,V.CUSACK,A.YAREMCHUK,M.TUKALO | |
3RW6 | 3RW6 | H | 120 | 52 | 2.3 | 8-10-11 | synthetic | STRUCTURE OF NUCLEAR RNA EXPORT FACTOR TAP BOUND TO CTE RNA | M.TEPLOVA,N.W.KHIN,D.J.PATEL,E.IZAURRALDE | |
2CZJ | 2CZJ | B | 240 | 69 | 3.0 | 10-31-06 | synthetic | CRYSTAL STRUCTURE OF THE TRNA DOMAIN OF TMRNA FROM THERMUS THERMOPHILUS HB8 | Y.BESSHO,R.SHIBATA,S.SEKINE,K.MURAYAMA,M.SHIROUZU, S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | |
3HJW | 3HJW | DE | 70 | 30 | 2.4 | 6-23-09 | synthetic,synthetic | STRUCTURE OF A FUNCTIONAL RIBONUCLEOPROTEIN PSEUDOURIDINE SYNTHASE BOUND TO A SUBSTRATE RNA | B.LIANG,J.ZHOU,E.KAHEN,R.M.TERNS,M.P.TERNS,H.LI | 3LWQ 3LWP 3LWV 3LWR 3LWO Compare |
1QA6 | 1QA6 | C | 116 | 54 | 2.8 | 5-25-99 | synthetic | CRYSTAL STRUCTURE OF A CONSERVED RIBOSOMAL PROTEIN-RNA COMPLEX | G.L.CONN,D.E.DRAPER,E.E.LATTMAN,A.G.GITTIS | 1HC8 1MMS 1OLN 1Y39 1C04 3J0D 2JQ7 Compare |
3HAX | 3HAX | EF | 71 | 31 | 2.1 | 6-23-09 | synthetic,synthetic | CRYSTAL STRUCTURE OF A SUBSTRATE-BOUND GAR1-MINUS H/ACA RNP FROM PYROCOCCUS FURIOSUS | K.YE | |
1F7Y | 1F7Y | B | 57 | 24 | 2.8 | 11-22-00 | synthetic | THE CRYSTAL STRUCTURE OF TWO UUCG LOOPS HIGHLIGHTS THE ROLE PLAYED BY 2'-HYDROXYL GROUPS IN ITS UNUSUAL STABILITY | E.ENNIFAR,A.NIKOULINE,A.SERGANOV,S.TISHCHENKO,N.NEVSKAYA, M.GARBER,B.EHRESMANN,C.EHRESMANN,S.NIKONOV,P.DUMAS | 1DK1 1KUQ Compare |
2HVY | 2HVY | E | 57 | 20 | 2.3 | 9-12-06 | synthetic | CRYSTAL STRUCTURE OF AN H/ACA BOX RNP FROM PYROCOCCUS FURIOSUS | K.YE | |
2DLC | 2DLC | Y | 57 | 20 | 2.4 | 6-12-07 | SACCHAROMYCES CEREVISIAE | CRYSTAL STRUCTURE OF THE TERNARY COMPLEX OF YEAST TYROSYL- TRNA SYNTHETASE | M.TSUNODA,Y.KUSAKABE,N.TANAKA,K.T.NAKAMURA | |
2LC8 | 2LC8 | A | 560 | 193 | SOLUTION NMR | 11-23-11 | MOLONEY MURINE LEUKEMIA VIRUS | SOLUTION STRUCTURE OF THE MLV READTHROUGH PSEUDOKNOT | B.HOUCK-LOOMIS,M.A.DURNEY | |
2NRE | 2NRE | F | 56 | 18 | 4.0 | 5-15-07 | synthetic | CRYSTAL STRUCTURE OF PSEUDOUDIRINDE SYNTHASE TRUA IN COMPLEX WITH LEUCYL TRNA | S.HUR,R.M.STROUD | |
1GTF | 1GTF | W | 44 | 0 | 1.8 | 4-05-02 | synthetic | THE STRUCTURE OF THE TRP RNA-BINDING ATTENUATION PROTEIN (TRAP) BOUND TO A 53-NUCLEOTIDE RNA MOLECULE CONTAINING GAGUU REPEATS | N.H.HOPCROFT,A.L.WENDT,P.GOLLNICK,A.A.ANTSON | 1C9S Compare |
2KZL | 2KZL | A | 440 | 132 | SOLUTION NMR | 2-23-11 | BACILLUS SUBTILIS SUBSP. SUBTILIS STR. 168 | SPECIFIER DOMAIN AND GA MOTIF REGION OF B. SUBTILIS TYRS T BOX LEADER RNA | J.WANG | |
1MZP | 1MZP | B | 55 | 25 | 2.6 | 1-21-03 | synthetic | STRUCTURE OF THE L1 PROTUBERANCE IN THE RIBOSOME | A.NIKULIN,I.ELISEIKINA,S.TISHCHENKO,N.NEVSKAYA,N.DAVYDOVA, O.PLATONOVA,W.PIENDL,M.SELMER,A.LILJAS,R.ZIMMERMANN, M.GARBER,S.NIKONOV | |
1P5M | 1P5M | A | 1210 | 416 | SOLUTION NMR | 11-04-03 | synthetic | SOLUTION STRUCTURE OF HCV IRES DOMAIN IIA | P.J.LUKAVSKY,I.KIM,G.A.OTTO,J.D.PUGLISI | |
2HGH | 2HGH | B | 1100 | 480 | SOLUTION NMR | 8-01-06 | XENOPUS LAEVIS | TRANSCRIPTION FACTOR IIIA ZINC FINGERS 4-6 BOUND TO 5S RRNA 55MER (NMR STRUCTURE) | B.M.LEE | |
4GCW | 4GCW | B | 53 | 21 | 3.0 | 10-31-12 | synthetic | CRYSTAL STRUCTURE OF RNASE Z IN COMPLEX WITH PRECURSOR TRNA(THR) | O.PELLEGRINI,I.LI DE LA SIERRA-GALLAY,J.PITON,L.GILET,C.CONDON | 2FK6 Compare |
4ENB | 4ENB | A | 51 | 20 | 2.3 | 5-09-12 | THERMOTOGA PETROPHILA | CRYSTAL STRUCTURE OF FLUORIDE RIBOSWITCH, BOUND TO IRIDIUM | A.R.REN,K.R.RAJASHANKAR,D.J.PATEL | 4ENA 3VRS 4ENC 4EN5 Compare |
3E5C | 3E5C | A | 52 | 21 | 2.2 | 10-07-08 | synthetic | CRYSTAL STRUCTURE OF THE SMK BOX (SAM-III) RIBOSWITCH WITH SAM | C.LU | 3E5F 3E5E Compare |
2QWY | 2QWY | AB | 156 | 63 | 2.8 | 1-22-08 | synthetic | SAM-II RIBOSWITCH BOUND TO S-ADENOSYLMETHIONINE | S.D.GILBERT,R.P.RAMBO,D.VAN TYNE,R.T.BATEY | |
3NPN | 3NPN | A | 50 | 18 | 2.8 | 10-06-10 | RALSTONIA SOLANACEARUM | STRUCTURE OF THE S-ADENOSYLHOMOCYSTEINE RIBOSWITCH AT 3.0A | F.E.REYES,A.E.EDWARDS,R.T.BATEY | 3NPQ Compare |
1RMN | 1RMN | A | 49 | 19 | FLUORESCENCE TRANSFER | 1-26-95 | synthetic | A THREE-DIMENSIONAL MODEL FOR THE HAMMERHEAD RIBOZYME BASED ON FLUORESCENCE MEASUREMENTS | T.TUSCHL,C.GOHLKE,T.M.JOVIN,E.WESTHOF,F.ECKSTEIN | |
1E8O | 1E8O | E | 49 | 18 | 3.2 | 11-08-00 | HOMO SAPIENS | CORE OF THE ALU DOMAIN OF THE MAMMALIAN SRP | O.WEICHENRIEDER,K.WILD,K.STRUB,S.CUSACK | |
1U63 | 1U63 | B | 98 | 40 | 3.4 | 4-12-05 | synthetic | THE STRUCTURE OF A RIBOSOMAL PROTEIN L1-MRNA COMPLEX | N.NEVSKAYA,S.TISHCHENKO,A.GABDOULKHAKOV,E.NIKONOVA, O.NIKONOV,A.NIKULIN,M.GARBER,S.NIKONOV,W.PIENDL | |
2VPL | 2VPL | B | 94 | 38 | 2.3 | 9-23-08 | METHANOCALDOCOCCUS JANNASCHII | THE STRUCTURE OF THE COMPLEX BETWEEN THE FIRST DOMAIN OF L1 PROTEIN FROM THERMUS THERMOPHILUS AND MRNA FROM METHANOCOCCUS JANNASCHII | V.KLJASHTORNY,S.TISHCHENKO,N.NEVSKAYA,S.NIKONOV,M.GARBER | |
2KUW | 2KUW | A | 528 | 208 | SOLUTION NMR | 5-19-10 | DROSOPHILA MELANOGASTER | SOLUTION STRUCTURE OF K10 TLS RNA (A-FORM MUTANT IN LOWER HELIX) | S.L.BULLOCK,I.RINGEL,D.ISH-HOROWICZ,P.J.LUKAVSKY | |
2KUU | 2KUU | A | 576 | 230 | SOLUTION NMR | 5-19-10 | DROSOPHILA MELANOGASTER | SOLUTION STRUCTURE OF K10 TLS RNA (GC MUTANT IN UPPER HELIX) | S.L.BULLOCK,I.RINGEL,D.ISH-HOROWICZ,P.J.LUKAVSKY | 2KUR 2KUV 2KE6 Compare |
1YMO | 1YMO | A | 940 | 417 | SOLUTION NMR | 3-15-05 | synthetic | SOLUTION STRUCTURE OF THE P2B-P3 PSEUDOKNOT FROM HUMAN TELOMERASE RNA | C.A.THEIMER,C.A.BLOIS,J.FEIGON | 2K96 2K95 Compare |
1S03 | 1S03 | B | 94 | 42 | 2.7 | 5-25-04 | synthetic | THE STRUCTURE OF A RIBOSOMAL PROTEIN S8/SPC OPERON MRNA COMPLEX | H.J.MERIANOS,J.WANG,P.B.MOORE | |
3CIY | 3CIY | CD | 92 | 46 | 3.4 | 5-06-08 | synthetic,MUS MUSCULUS | MOUSE TOLL-LIKE RECEPTOR 3 ECTODOMAIN COMPLEXED WITH DOUBLE- STRANDED RNA | L.LIU,I.BOTOS,Y.WANG,J.N.LEONARD,J.SHILOACH,D.M.SEGAL, D.R.DAVIES | |
1XJR | 1XJR | A | 46 | 20 | 2.7 | 2-01-05 | synthetic | THE STRUCTURE OF A RIGOROUSLY CONSERVED RNA ELEMENT WITHIN THE SARS VIRUS GENOME | M.P.ROBERTSON,H.IGEL,R.BAERTSCH,D.HAUSSLER,M.ARES JR., W.G.SCOTT | |
3IAB | 3IAB | R | 46 | 13 | 2.7 | 1-26-10 | synthetic | CRYSTAL STRUCTURE OF RNASE P /RNASE MRP PROTEINS POP6, POP7 IN A COMPLEX WITH THE P3 DOMAIN OF RNASE MRP RNA | A.PEREDERINA,O.A.ESAKOVA,C.QUAN,E.KHANOVA,A.S.KRASILNIKOV | |
2NUE | 2NUE | C | 46 | 21 | 2.9 | 11-20-07 | synthetic | CRYSTAL STRUCTURE OF RNASE III FROM AQUIFEX AEOLICUS COMPLEXED WITH DS-RNA AT 2.9-ANGSTROM RESOLUTION | J.H.GAN,G.SHAW,J.E.TROPEA,D.S.WAUGH,D.L.COURT,X.JI | |
3PU1 | 3PU1 | R | 45 | 0 | 3.1 | 1-12-11 | synthetic | CRYSTAL STRUCTURE OF A VESICULAR STOMATITIS VIRUS NUCLEOCAPSID-POLYG COMPLEX | M.LUO,T.J.GREEN,M.ROWSE | |
2GIC | 2GIC | R | 45 | 0 | 2.9 | 8-22-06 | synthetic | CRYSTAL STRUCTURE OF A VESICULAR STOMATITIS VIRUS NUCLEOCAPSID-RNA COMPLEX | T.J.GREEN,X.ZHANG,G.W.WERTZ,M.LUO | 3PU4 3HHZ Compare |
2L94 | 2L94 | A | 450 | 205 | SOLUTION NMR | 6-15-11 | synthetic | STRUCTURE OF THE HIV-1 FRAMESHIFT SITE RNA BOUND TO A SMALL MOLECULE INHIBITOR OF VIRAL REPLICATION | R.J.MARCHESCHI,M.TONELLI,A.KUMAR,S.E.BUTCHER | 1Z2J 1ZC5 2JUK Compare |
1P6V | 1P6V | B | 69 | 17 | 3.2 | 8-12-03 | synthetic | CRYSTAL STRUCTURE OF THE TRNA DOMAIN OF TRANSFER-MESSENGER RNA IN COMPLEX WITH SMPB | S.GUTMANN,P.W.HAEBEL,L.METZINGER,M.SUTTER,B.FELDEN,N.BAN | |
3PU0 | 3PU0 | R | 45 | 0 | 3.1 | 1-12-11 | synthetic | CRYSTAL STRUCTURE OF A VESICULAR STOMATITIS VIRUS NUCLEOCAPSID-POLYC COMPLEX | M.LUO,T.J.GREEN,M.ROWSE | |
2WYY | 2WYY | R | 90 | 0 | 10.0 | 2-16-10 | synthetic | CRYOEM MODEL OF THE VESICULAR STOMATITIS VIRUS | P.GE,J.TSAO,T.J.GREEN,M.LUO,Z.H.ZHOU | |
1QZW | 1QZW | B | 180 | 44 | 4.1 | 11-18-03 | SULFOLOBUS SOLFATARICUS | CRYSTAL STRUCTURE OF THE COMPLETE CORE OF ARCHAEAL SRP AND IMPLICATIONS FOR INTER-DOMAIN COMMUNICATION | K.R.ROSENDAL,K.WILD,G.MONTOYA,I.SINNING | |
3PTX | 3PTX | R | 45 | 0 | 3.0 | 1-12-11 | synthetic | CRYSTAL STRUCTURE OF A VESICULAR STOMATITIS VIRUS NUCLEOCAPSID-POLYA COMPLEX | M.LUO,T.J.GREEN,M.ROWSE | |
1GTN | 1GTN | W | 44 | 0 | 2.5 | 4-05-02 | synthetic | STRUCTURE OF THE TRP RNA-BINDING ATTENUATION PROTEIN (TRAP) BOUND TO AN RNA MOLECULE CONTAINING 11 GAGCC REPEATS | N.H.HOPCROFT,A.L.WENDT,P.GOLLNICK,A.A.ANTSON | |
1G1X | 1G1X | DE | 84 | 32 | 2.6 | 10-30-00 | synthetic,synthetic | STRUCTURE OF RIBOSOMAL PROTEINS S15, S6, S18, AND 16S RIBOSOMAL RNA | S.C.AGALAROV,G.S.PRASAD,P.M.FUNKE,C.D.STOUT,J.R.WILLIAMSON | |
1A60 | 1A60 | A | 1056 | 312 | SOLUTION NMR | 5-27-98 | TURNIP YELLOW MOSAIC VIRUS | NMR STRUCTURE OF A CLASSICAL PSEUDOKNOT: INTERPLAY OF SINGLE-AND DOUBLE-STRANDED RNA, 24 STRUCTURES | M.H.KOLK,M.VAN DER GRAAF,S.S.WIJMENGA,C.W.A.PLEIJ,H.A.HEUS, C.W.HILBERS | |
2ADT | 2ADT | AB | 1720 | 921 | SOLUTION NMR | 7-26-05 | synthetic | NMR STRUCTURE OF A 30 KDA GAAA TETRALOOP-RECEPTOR COMPLEX. | J.H.DAVIS,M.TONELLI,L.G.SCOTT,L.JAEGER,J.R.WILLIAMSON, S.E.BUTCHER | 2JYF 2I7E 2I7Z 2JYJ 2JYH Compare |
2FEY | 2FEY | A | 430 | 120 | SOLUTION NMR | 6-27-06 | synthetic | THE STRUCTURE OF STEM LOOP IV OF TETRAHYMENA TELOMERASE RNA | Y.CHEN,J.FENDER,J.D.LEGASSIE,M.B.JARSTFER,T.M.BRYAN,G.VARANI | |
1CQL | 1CQL | A | 430 | 135 | SOLUTION NMR | 1-14-00 | ESCHERICHIA COLI | NMR STRUCTURE OF SRP RNA DOMAIN IV | U.SCHMITZ,T.L.JAMES | 1CQ5 Compare |
3ZD3 | 3ZD3 | AB | 60 | 25 | 1.6 | 12-12-12 | SYNTHETIC CONSTRUCT | HIGH-RESOLUTION FULL-LENGTH HAMMERHEAD RIBOZYME IN THE PRESENCE OF MG ION. | W.G.SCOTT,M.MARTICK,M.ANDERSON,E.SCHULTZ | 3ZD4 2OEU 3ZD5 Compare |
2L2J | 2L2J | A | 840 | 373 | SOLUTION NMR | 10-27-10 | HOMO SAPIENS | SOLUTION NMR STRUCTURE OF THE LOWER PART OF THE R/G STEM LOOP RNA | F.F.OBERSTRASS,F.H.-T.ALLAIN,R.STEFL | 2L2K Compare |
2KX8 | 2KX8 | A | 42 | 17 | SOLUTION NMR | 9-08-10 | HOMO SAPIENS | NMR STRUCTURE OF STEM-LOOP 4 FROM THE HUMAN 7SK SNRNA IN COMPLEX WITH ARGININE | M.A.DURNEY,V.M.D'SOUZA | |
1MNX | 1MNX | A | 546 | 214 | SOLUTION NMR | 1-14-03 | SPINACIA OLERACEA | THE SOLUTION STRUCTURE OF THE LOOP E REGION OF THE 5S RRNA FROM SPINACH CHLOROPLASTS. | P.VALLURUPALLI,P.B.MOORE | |
3BNT | 3BNT | A | 42 | 18 | 2.3 | 6-24-08 | synthetic | CRYSTAL STRUCTURE OF THE HOMO SAPIENS MITOCHONDRIAL RIBOSOMAL DECODING SITE IN THE PRESENCE OF [CO(NH3)6]CL3 (A1555G MUTANT, BR-DERIVATIVE) | J.KONDO,E.WESTHOF | |
1KH6 | 1KH6 | A | 42 | 16 | 2.9 | 4-26-02 | synthetic | CRYSTAL STRUCTURE OF AN RNA TERTIARY DOMAIN ESSENTIAL TO HCV IRES-MEDIATED TRANSLATION INITIATION. | J.S.KIEFT,K.ZHOU,A.GRECH,R JUBIN,J.A.DOUDNA | |
2AU4 | 2AU4 | A | 41 | 11 | SOLUTION NMR | 3-28-06 | synthetic | CLASS I GTP APTAMER | J.M.CAROTHERS,J.H.DAVIS,J.J.CHOU,J.W.SZOSTAK | |
1A51 | 1A51 | A | 369 | 142 | SOLUTION NMR | 5-27-98 | ESCHERICHIA COLI | LOOP D/LOOP E ARM OF E. COLI 5S RRNA, NMR, 9 STRUCTURES | A.DALLAS,P.B.MOORE | 1A4D Compare |
2HUA | 2HUA | A | 440 | 149 | SOLUTION NMR | 4-17-07 | synthetic | SOLUTION STRUCTURE OF CSFV IRES DOMAIN IIA | N.LOCKER,L.E.EASTON,P.J.LUKAVSKY | |
2D1B | 2D1B | AB | 78 | 40 | SOLUTION NMR | 11-01-05 | synthetic | SOLUTION RNA STRUCTURE MODEL OF THE HIV-1 DIMERIZATION INITIATION SITE IN THE KISSING-LOOP DIMER | S.BABA,K.TAKAHASHI,S.NOGUCHI,H.TAKAKU,Y.KOYANAGI,N.YAMAMOTO, G.KAWAI | |
2D1A | 2D1A | AB | 78 | 38 | SOLUTION NMR | 11-01-05 | synthetic | SOLUTION RNA STRUCTURE MODEL OF THE HIV-1 DIMERIZATION INITIATION SITE IN THE EXTENDED-DUPLEX DIMER | S.BABA,K.TAKAHASHI,S.NOGUCHI,H.TAKAKU,Y.KOYANAGI,N.YAMAMOTO, G.KAWAI | |
3P22 | 3P22 | EFGH | 190 | 104 | 2.5 | 12-08-10 | synthetic,synthetic | CRYSTAL STRUCTURE OF THE ENE, A VIRAL RNA STABILITY ELEMENT, IN COMPLEX WITH A9 RNA | R.M.MITTON-FRY,S.J.DEGREGORIO,J.WANG,T.A.STEITZ,J.A.STEITZ | |
1YKV | 1YKV | CD | 98 | 42 | 3.3 | 2-22-05 | synthetic,synthetic | CRYSTAL STRUCTURE OF THE DIELS-ALDER RIBOZYME COMPLEXED WITH THE PRODUCT OF THE REACTION BETWEEN N-PENTYLMALEIMIDE AND COVALENTLY ATTACHED 9-HYDROXYMETHYLANTHRACENE | A.SERGANOV,S.KEIPER,L.MALININA,V.TERESHKO,E.SKRIPKIN, C.HOBARTNER,A.POLONSKAIA,A.T.PHAN,R.WOMBACHER,R.MICURA, Z.DAUTER,A.JASCHKE,D.J.PATEL | 1YLS 1YKQ Compare |
1B36 | 1B36 | A | 380 | 106 | SOLUTION NMR | 12-23-98 | SYNTHETIC CONSTRUCT | SOLUTION STRUCTURE OF THE HAIRPIN RIBOZYME LOOP B DOMAIN RNA, NMR, 10 STRUCTURES | S.E.BUTCHER,T.DIECKMANN,J.FEIGON | |
2KU0 | 2KU0 | A | 380 | 145 | SOLUTION NMR | 4-28-10 | HEPATITIS C VIRUS | INHIBITOR INDUCED STRUCTURAL CHANGE IN THE HCV IRES DOMAIN IIA RNA | R.B.PAULSEN,P.P.SETH,E.E.SWAYZE,R.H.GRIFFEY,J.J.SKALICKY,T.E.CHEATHAM III,D.R.DAVIS | |
1U3K | 1U3K | A | 380 | 141 | SOLUTION NMR | 7-12-05 | synthetic | THE SOLUTION STRUCTURE OF A SUBSTRATE OF ARCHAEAL PRE-TRNA SPLICING ENDONUCLEASES | E.C.POLLOCK,P.B.MOORE | |
2A9L | 2A9L | A | 38 | 14 | SOLUTION NMR | 6-17-98 | synthetic | SOLUTION NMR STRUCTURE OF A SUBSTRATE FOR THE ARCHAEAL PRE- TRNA SPLICING ENDONUCLEASES: THE BULGE-HELIX-BULGE MOTIF, MINIMIZED AVERAGE STRUCTURE | J.L.DIENER,P.B.MOORE | 1A9L Compare |
2HW8 | 2HW8 | B | 36 | 17 | 2.1 | 12-19-06 | synthetic | STRUCTURE OF RIBOSOMAL PROTEIN L1-MRNA COMPLEX AT 2.1 RESOLUTION. | S.TISHCHENKO,E.NIKONOVA,A.NIKULIN,N.NEVSKAYA,S.VOLCHKOV, W.PIENDL,M.GARBER,S.NIKONOV | 1ZHO Compare |
2ZY6 | 2ZY6 | A | 38 | 12 | 1.8 | 6-30-09 | synthetic | CRYSTAL STRUCTURE OF A TRUNCATED TRNA, TPHE39A | I.TANAKA,M.YAO,Y.TANAKA,Y.KITAGO,S.YMAGATA | |
1M5L | 1M5L | A | 570 | 227 | SOLUTION NMR | 9-18-02 | synthetic | STRUCTURE OF WILD-TYPE AND MUTANT INTERNAL LOOPS FROM THE SL-1 DOMAIN OF THE HIV-1 PACKAGING SIGNAL | J.GALLEGO,J.GREATOREX,G.VARANI,A.LEVER | |
2KTZ | 2KTZ | A | 380 | 140 | SOLUTION NMR | 4-28-10 | HEPATITIS C VIRUS | INHIBITOR INDUCED STRUCTURAL CHANGE IN THE HCV IRES DOMAIN IIA RNA | R.B.PAULSEN,P.P.SETH,E.E.SWAYZE,R.H.GRIFFEY,J.J.SKALICKY,T.E.CHEATHAM III,D.R.DAVIS | |
2KHY | 2KHY | A | 380 | 92 | SOLUTION NMR | 2-16-10 | synthetic | SPECIFIER DOMAIN OF B. SUBTILIS TYRS T BOX LEADER RNA | J.WANG,T.M.HENKIN | |
1TXS | 1TXS | A | 760 | 338 | SOLUTION NMR | 10-05-04 | synthetic | STEM-LOOP D OF THE CLOVERLEAF DOMAIN OF ENTEROVIRAL 5'UTR RNA | Z.DU,J.YU,N.B.ULYANOV,R.ANDINO,T.L.JAMES | |
1Q8N | 1Q8N | A | 950 | 345 | SOLUTION NMR | 3-23-04 | synthetic | SOLUTION STRUCTURE OF THE MALACHITE GREEN RNA BINDING APTAMER | J.FLINDERS,S.C.DEFINA,D.M.BRACKETT,C.BAUGH,C.WILSON, T.DIECKMANN | |
1D6K | 1D6K | B | 740 | 275 | SOLUTION NMR | 11-22-99 | ESCHERICHIA COLI | NMR SOLUTION STRUCTURE OF THE 5S RRNA E-LOOP/L25 COMPLEX | M.STOLDT,J.WOHNERT,O.OHLENSCHLAGER,M.GORLACH,L.R.BROWN | |
2LUB | 2LUB | A | 370 | 162 | SOLUTION NMR | 7-25-12 | synthetic | HIGH RESOLUTION NMR SOLUTION STRUCTURE OF HELIX H1 OF THE HUMAN HAR1 RNA | M.CEVEC,M.ZIEGELER,C.RICHTER,H.SCHWALBE | 2LHP Compare |
1KOG | 1KOG | J | 296 | 139 | 3.5 | 4-26-02 | synthetic | CRYSTAL STRUCTURE OF E. COLI THREONYL-TRNA SYNTHETASE INTERACTING WITH THE ESSENTIAL DOMAIN OF ITS MRNA OPERATOR | A.TORRES-LARRIOS,A.C.DOCK-BREGEON,P.ROMBY,B.REES, R.SANKARANARAYANAN,J.CAILLET,M.SPRINGER,C.EHRESMANN, B.EHRESMANN,D.MORAS | |
1I6U | 1I6U | D | 74 | 37 | 2.6 | 8-03-01 | synthetic | RNA-PROTEIN INTERACTIONS: THE CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN S8/RRNA COMPLEX FROM METHANOCOCCUS JANNASCHII | S.TISHCHENKO,A.NIKULIN,N.FOMENKOVA,N.NEVSKAYA,O.NIKONOV, P.DUMAS,H.MOINE,B.EHRESMANN,C.EHRESMANN,W.PIENDL,V.LAMZIN, M.GARBER,S.NIKONOV | |
2P7D | 2P7D | ABCDP | 61 | 29 | 2.2 | 5-22-07 | synthetic,synthetic,synthetic,synthetic | A MINIMAL, 'HINGED' HAIRPIN RIBOZYME CONSTRUCT SOLVED WITH MIMICS OF THE PRODUCT STRANDS AT 2.25 ANGSTROMS RESOLUTION | A.T.TORELLI,J.KRUCINSKA,J.E.WEDEKIND | 3GS8 3GS5 2OUE 2FGP 2P7E 2NPY 2BCY 2D2K 1X9C 1ZFX 3GS1 1ZFV 4G6R 1ZFT 2P7F 2BCZ 1X9K 2NPZ Compare |
1E95 | 1E95 | A | 540 | 174 | SOLUTION NMR | 8-23-01 | SIMIAN RETROVIRUS 1 | SOLUTION STRUCTURE OF THE PSEUDOKNOT OF SRV-1 RNA, INVOLVED IN RIBOSOMAL FRAMESHIFTING | P.J.A.MICHIELS,A.VERSLEYEN,C.W.A.PLEIJ,C.W.HILBERS,H.A.HEUS | |
3VJR | 3VJR | BD | 72 | 27 | 2.4 | 9-12-12 | synthetic | CRYSTAL STRUCTURE OF PEPTIDYL-TRNA HYDROLASE FROM ESCHERICHIA COLI IN COMPLEX WITH THE CCA-ACCEPTOR-T[PSI]C DOMAIN OF TRNA | K.ITO,R.MURAKAMI,M.MOCHIZUKI,H QI,Y.SHIMIZU,K.I.MIURA,T.UEDA, T.UCHIUMI | |
1N8X | 1N8X | A | 720 | 320 | SOLUTION NMR | 4-08-03 | synthetic | SOLUTION STRUCTURE OF HIV-1 STEM LOOP SL1 | D.C.LAWRENCE,C.C.STOVER,J.NOZNITSKY,Z.WU,M.F.SUMMERS | |
2LA5 | 2LA5 | A | 360 | 191 | SOLUTION NMR | 6-08-11 | synthetic | RNA DUPLEX-QUADRUPLEX JUNCTION COMPLEX WITH FMRP RGG PEPTIDE | A.PHAN,V.KURYAVYI,J.DARNELL,A.SERGANOV,A.MAJUMDAR,S.ILIN,R.DARNELL, D.PATEL | |
3FU2 | 3FU2 | A | 93 | 50 | 2.9 | 3-03-09 | synthetic | COCRYSTAL STRUCTURE OF A CLASS-I PREQ1 RIBOSWITCH | D.J.KLEIN,T.E.EDWARDS,A.R.FERRE-D'AMARE | 3K1V 2L1V Compare |
1RAW | 1RAW | A | 360 | 104 | SOLUTION NMR | 1-27-97 | synthetic | ATP BINDING RNA APTAMER IN COMPLEX WITH AMP, NMR, 10 STRUCTURES | T.DIECKMANN,J.FEIGON | |
2TPK | 2TPK | A | 36 | 13 | SOLUTION NMR | 11-04-98 | synthetic | AN INVESTIGATION OF THE STRUCTURE OF THE PSEUDOKNOT WITHIN THE GENE 32 MESSENGER RNA OF BACTERIOPHAGE T2 USING HETERONUCLEAR NMR METHODS | J.A.HOLLAND,M.R.HANSEN,Z.DU,D.W.HOFFMAN | |
2FDT | 2FDT | A | 396 | 164 | SOLUTION NMR | 12-05-06 | synthetic | SOLUTION STRUCTURE OF A CONSERVED RNA HAIRPIN OF EEL LINE UNAL2 | Y.NOMURA,S.BABA,S.NAKAZATO,T.SAKAMOTO,M.KAJIKAWA,N.OKADA, G.KAWAI | |
1KFO | 1KFO | A | 36 | 16 | 1.6 | 12-07-01 | synthetic | CRYSTAL STRUCTURE OF AN RNA HELIX RECOGNIZED BY A ZINC- FINGER PROTEIN: AN 18 BASE PAIR DUPLEX AT 1.6 RESOLUTION | S.LIMA,J.HILDENBRAND,A.KOROSTELEV,S.HATTMAN,H.LI | |
2PCV | 2PCV | A | 350 | 68 | SOLUTION NMR | 5-08-07 | synthetic | SOLUTION STRUCTURE OF AN RRNA SUBSTRATE BOUND TO THE PSEUDOURIDYLATION POCKET OF A BOX H/ACA SNORNA | H.JIN,J.P.LORIA,P.B.MOORE | |
2DR8 | 2DR8 | B | 33 | 13 | 2.5 | 11-14-06 | synthetic | COMPLEX STRUCTURE OF CCA-ADDING ENZYME WITH TRNAMINIDC AND CTP | K.TOMITA,R.ISHITANI,S.FUKAI,O.NUREKI | 2ZH1 2ZH7 2DR7 2ZHA 2ZH9 2ZH3 2ZH2 2ZH6 2ZH5 2DVI 2DR9 2ZH4 2ZHB 2ZH8 2DRA 2DRB 2DR5 Compare |
2GM0 | 2GM0 | AB | 700 | 266 | SOLUTION NMR | 4-25-06 | synthetic | LINEAR DIMER OF STEMLOOP SL1 FROM HIV-1 | N.B.ULYANOV,A.MUJEEB,Z.DU,M.TONELLI,T.G.PARSLOW,T.L.JAMES | |
4H5O | 4H5O | K | 70 | 0 | 3.9 | 11-07-12 | synthetic | CRYSTAL STRUCTURE OF RIFT VALLEY FEVER VIRUS NUCLEOCAPSID PROTEIN PENTAMER BOUND TO SINGLE-STRANDED RNA | D.D.RAYMOND,J.L.SMITH | |
2XD0 | 2XD0 | V | 35 | 13 | 3.0 | 1-12-11 | synthetic | A PROCESSED NON-CODING RNA REGULATES A BACTERIAL ANTIVIRAL SYSTEM | T.R.BLOWER,X.Y.PEI,F.L.SHORT,P.C.FINERAN,D.P.HUMPHREYS,B.F.LUISI, G.P.C.SALMOND | 2XDB 2XDD Compare |
1ULL | 1ULL | A | 245 | 100 | SOLUTION NMR | 8-20-97 | synthetic | RNA APTAMER COMPLEXED WITH HIV-1 REV PEPTIDE, NMR, 7 STRUCTURES | X.YE,A.GORIN,A.D.ELLINGTON,D.J.PATEL | |
3OUY | 3OUY | C | 70 | 22 | 2.7 | 12-01-10 | synthetic | HOW THE CCA-ADDING ENZYME SELECTS ADENINE OVER CYTOSINE AT POSITION 76 OF TRNA | B.C.PAN,Y.XIONG,T.A.STEITZ | |
3OVA | 3OVA | C | 34 | 13 | 2.0 | 12-01-10 | synthetic | HOW THE CCA-ADDING ENZYME SELECTS ADENINE OVER CYTOSINE IN POSITION 76 OF TRNA | B.C.PAN,Y.XIONG,T.A.STEITZ | 3OVS 3OVB 3OV7 Compare |
4FNJ | 4FNJ | A | 35 | 16 | 1.9 | 10-17-12 | SYNTHETIC CONSTRUCT | UTILIZING THE GAAA TETRALOOP/RECEPTOR TO FACILITATE CRYSTAL PACKING AND STRUCTURE DETERMINATION OF A CUG RNA HELIX | L.A.COONROD,J.R.LOHMAN,J.A.BERGLUND | |
3R9X | 3R9X | C | 35 | 8 | 2.8 | 6-22-11 | synthetic | CRYSTAL STRUCTURE OF ERA IN COMPLEX WITH MGGDPNP, NUCLEOTIDES 1506- 1542 OF 16S RIBOSOMAL RNA, AND KSGA | C.TU,X.JI | |
1ET4 | 1ET4 | AB | 175 | 75 | 2.3 | 11-13-00 | synthetic | CRYSTAL STRUCTURE OF A VITAMIN B12 BINDING RNA APTAMER WITH LIGAND AT 2.3 A | D.SUSSMAN,C.WILSON | 1DDY Compare |
2PCW | 2PCW | AB | 833 | 274 | SOLUTION NMR | 5-08-07 | synthetic,synthetic | SOLUTION STRUCTURE OF AN RRNA SUBSTRATE BOUND TO THE PSEUDOURIDYLATION POCKET OF A BOX H/ACA SNORNA | H.JIN,J.P.LORIA,P.B.MOORE | |
3PLA | 3PLA | GHIJ | 87 | 35 | 3.1 | 1-26-11 | synthetic,synthetic | CRYSTAL STRUCTURE OF A CATALYTICALLY ACTIVE SUBSTRATE-BOUND BOX C/D RNP FROM SULFOLOBUS SOLFATARICUS | J.LIN,S.LAI,R.JIA,A.XU,L.ZHANG,J.LU,K.YE | |
2L3E | 2L3E | A | 700 | 260 | SOLUTION NMR | 11-17-10 | synthetic | SOLUTION STRUCTURE OF P2A-J2A/B-P2B OF HUMAN TELOMERASE RNA | Q.ZHANG,N.KIM,R.D.PETERSON,Z.WANG,J.FEIGON | |
1FMN | 1FMN | A | 175 | 71 | SOLUTION NMR | 7-11-96 | synthetic | SOLUTION STRUCTURE OF FMN-RNA APTAMER COMPLEX, NMR, 5 STRUCTURES | P.FAN,A.K.SURI,R.FIALA,D.LIVE,D.J.PATEL | |
2P89 | 2P89 | AB | 960 | 433 | SOLUTION NMR | 4-03-07 | synthetic,synthetic | SOLUTION STRUCTURE OF THE 3' PSEUDOURIDYATION POCKET OF U65 SNORNA WITH BOUND SUBSTRATE | H.WU,J.FEIGON | |
2L3C | 2L3C | B | 680 | 280 | SOLUTION NMR | 10-27-10 | RATTUS NORVEGICUS | SOLUTION STRUCTURE OF ADAR2 DSRBM1 BOUND TO LSL RNA | F.ALLAIN,R.STEFL,F.OBERSTRASS | |
1ETF | 1ETF | A | 34 | 14 | SOLUTION NMR | 3-12-97 | synthetic | REV RESPONSE ELEMENT (RRE) RNA COMPLEXED WITH REV PEPTIDE, NMR, MINIMIZED AVERAGE STRUCTURE | J.L.BATTISTE,H.MAO,N.S.RAO,R.TAN,D.R.MUHANDIRAM,L.E.KAY, A.D.FRANKEL,J.R.WILLAMSON | 1I9F 1ETG Compare |
1R2P | 1R2P | A | 340 | 132 | SOLUTION NMR | 2-03-04 | synthetic | SOLUTION STRUCTURE OF DOMAIN 5 FROM THE AI5(GAMMA) GROUP II INTRON | R.K.O.SIGEL,D.G.SASHITAL,D.L.ABRAMOVITZ,A.G.PALMER III, S.E.BUTCHER,A.M.PYLE | |
1R7W | 1R7W | A | 680 | 227 | SOLUTION NMR | 5-25-04 | synthetic | NMR STRUCTURE OF THE R(GGAGGACAUCCCUCACGGGUGACCGUGGUCCUCC), DOMAIN IV STEM-LOOP B OF ENTEROVIRAL IRES WITH AUCCCU BULGE | Z.DU,N.B.ULYANOV,J.YU,T.L.JAMES | |
1R7Z | 1R7Z | A | 680 | 209 | SOLUTION NMR | 5-25-04 | synthetic | NMR STRUCTURE OF THE R(GGAGGACAUUCCUCACGGGUGACCGUGGUCCUCC), DOMAIN IV STEM-LOOP B OF ENTEROVIRAL IRES WITH AUUCCU BULGE | Z.DU,N.B.ULYANOV,J.YU,T.L.JAMES | |
2LPT | 2LPT | A | 170 | 72 | SOLUTION NMR | 8-08-12 | synthetic | MOLECULAR DYNAMICS RE-REFINEMENT OF DOMAIN 5 OF THE PYLAIELLA LITTORALIS GROUP II INTRON | N.M.HENRIKSEN,D.R.DAVIS,T.E.CHEATHAM III | 2F88 Compare |
1HMH | 1HMH | AC | 102 | 30 | 2.6 | 12-07-95 | engineered | THREE-DIMENSIONAL STRUCTURE OF A HAMMERHEAD RIBOZYME | H.W.PLEY,K.M.FLAHERTY,D.B.MCKAY | |
3R9W | 3R9W | B | 34 | 0 | 2.0 | 6-22-11 | synthetic | CRYSTAL STRUCTURE OF ERA IN COMPLEX WITH MGGDPNP AND NUCLEOTIDES 1506- 1542 OF 16S RIBOSOMAL RNA | C.TU,X.JI | |
1P5N | 1P5N | A | 680 | 253 | SOLUTION NMR | 11-04-03 | synthetic | SOLUTION STRUCTURE OF HCV IRES DOMAIN IIB | P.J.LUKAVSKY,I.KIM,G.A.OTTO,J.D.PUGLISI | |
2EUY | 2EUY | A | 510 | 181 | SOLUTION NMR | 1-03-06 | synthetic | SOLUTION STRUCTURE OF THE INTERNAL LOOP OF HUMAN U65 H/ACA SNORNA 3' HAIRPIN | J.FEIGON,M.KHANNA,H.WU,C.JOHANSSON,M.CAIZERGUES-FERRER | |
2LPS | 2LPS | A | 170 | 66 | SOLUTION NMR | 8-08-12 | synthetic | MOLECULAR DYNAMICS RE-REFINEMENT OF DOMAIN 5 OF THE YEAST AI5(GAMMA) GROUP II INTRON | N.M.HENRIKSEN,D.R.DAVIS,T.E.CHEATHAM III | |
1NBK | 1NBK | A | 34 | 14 | SOLUTION NMR | 12-03-03 | synthetic | THE STRUCTURE OF RNA APTAMER FOR HIV TAT COMPLEXED WITH TWO ARGININAMIDE MOLECULES | A.MATSUGAMI,S.KOBAYASHI,K.OUHASHI,S.UESUGI,R.YAMAMOTO, K.TAIRA,S.NISHIKAWA,P.K.R.KUMAR,M.KATAHIRA | |
3NVI | 3NVI | E | 48 | 15 | 2.7 | 7-20-11 | synthetic | STRUCTURE OF N-TERMINAL TRUNCATED NOP56/58 BOUND WITH L7AE AND BOX C/D RNA | H.LI,S.XUE,R.WANG | 3NMU Compare |
1RNK | 1RNK | A | 34 | 12 | SOLUTION NMR | 2-27-95 | synthetic | THE STRUCTURE OF AN RNA PSEUDOKNOT THAT CAUSES EFFICIENT FRAMESHIFTING IN MOUSE MAMMARY TUMOR VIRUS | L.X.SHEN,I.TINOCO JUNIOR | |
1MJI | 1MJI | C | 68 | 28 | 2.5 | 1-21-03 | ESCHERICHIA COLI | DETAILED ANALYSIS OF RNA-PROTEIN INTERACTIONS WITHIN THE BACTERIAL RIBOSOMAL PROTEIN L5/5S RRNA COMPLEX | A.PEREDERINA,N.NEVSKAYA,O.NIKONOV,A.NIKULIN,P.DUMAS,M.YAO, I.TANAKA,M.GARBER,G.GONGADZE,S.NIKONOV | |
2JTP | 2JTP | A | 680 | 273 | SOLUTION NMR | 10-02-07 | synthetic | SOLUTION STRUCTURE OF THE FRAMESHIFT-INDUCING RNA STEM-LOOP IN SIV | R.J.MARCHESCHI,D.W.STAPLE,S.E.BUTCHER | |
2KPV | 2KPV | A | 340 | 128 | SOLUTION NMR | 8-04-10 | synthetic | NMR MODEL OF THE FIRST LET-7 MIRNA COMPLEMENTARY SITE (LCS1) IN 3'-UTR OF LIN-41 MRNA FROM C. ELEGANS | M.CEVEC,C.THIBAUDEAU,J.PLAVEC | |
1T28 | 1T28 | A | 34 | 7 | SOLUTION NMR | 8-10-04 | synthetic | HIGH RESOLUTION STRUCTURE OF A PICORNAVIRAL INTERNAL CIS- ACTING REPLICATION ELEMENT | V.THIVIYANATHAN,Y.YANG,K.KALUARACHCHI,R.REYNBRAND, D.G.GORENSTEIN,S.M.LEMON | |
1EXY | 1EXY | A | 396 | 164 | SOLUTION NMR | 5-15-00 | synthetic | SOLUTION STRUCTURE OF HTLV-1 PEPTIDE BOUND TO ITS RNA APTAMER TARGET | F.JIANG,A.GORIN,W.HU,A.MAJUMDAR,S.BASKERVILLE,W.XU, A.ELLINGTON,D.J.PATEL | |
4ATO | 4ATO | G | 33 | 12 | 2.2 | 12-26-12 | BACILLUS THURINGIENSIS | NEW INSIGHTS INTO THE MECHANISM OF BACTERIAL TYPE III TOXIN- ANTITOXIN SYSTEMS: SELECTIVE TOXIN INHIBITION BY A NON- CODING RNA PSEUDOKNOT | F.L.SHORT,X.Y.PEI,T.R.BLOWER,S.L.ONG,B.F.LUISI,G.P.C.SALMOND | |
3Q50 | 3Q50 | A | 33 | 18 | 2.8 | 5-18-11 | synthetic | STRUCTURAL ANALYSIS OF A CLASS I PREQ1 RIBOSWITCH APTAMER IN THE METABOLITE-BOUND STATE | J.L.JENKINS,J KRUCINSKA,J.E.WEDEKIND | 3Q51 3GCA Compare |
1EHT | 1EHT | A | 330 | 122 | SOLUTION NMR | 12-24-97 | synthetic | THEOPHYLLINE-BINDING RNA IN COMPLEX WITH THEOPHYLLINE, NMR, 10 STRUCTURES | G.R.ZIMMERMANN,A.PARDI | 1O15 Compare |
2JXV | 2JXV | A | 330 | 126 | SOLUTION NMR | 4-29-08 | synthetic | SOLUTION STRUCTURE OF A LET-7 MIRNA:LIN-41 MRNA COMPLEX FROM C. ELEGANS | M.CEVEC,C.THIBAUDEAU,J.PLAVEC | |
2OZB | 2OZB | C | 33 | 13 | 2.6 | 3-20-07 | synthetic | STRUCTURE OF A HUMAN PRP31-15.5K-U4 SNRNA COMPLEX | S.LIU,R.LUEHRMANN,M.C.WAHL | |
1F1T | 1F1T | A | 33 | 14 | 2.8 | 9-04-00 | synthetic | CRYSTAL STRUCTURE OF THE MALACHITE GREEN APTAMER COMPLEXED WITH TETRAMETHYL-ROSAMINE | C.BAUGH,D.GRATE,C.WILSON | |
1G70 | 1G70 | A | 448 | 170 | SOLUTION NMR | 2-07-01 | HUMAN IMMUNODEFICIENCY VIRUS 1 | COMPLEX OF HIV-1 RRE-IIB RNA WITH RSG-1.2 PEPTIDE | Y.GOSSER,T.HERMANN,A.MAJUMDAR,W.HU,R.FREDERICK,F.JIANG,W.XU, D.J.PATEL | |
1Z31 | 1Z31 | A | 320 | 110 | SOLUTION NMR | 3-22-05 | synthetic | THE STRUCTURE OF AN ENZYME-ACTIVATING FRAGMENT OF HUMAN TELOMERASE RNA | T.C.LEEPER,G.VARANI | |
2KF0 | 2KF0 | A | 240 | 96 | SOLUTION NMR | 7-21-09 | synthetic | NMR STRUCTURE OF U6 ISL AT PH 7.0 | V.VENDITTI,S.E.BUTCHER | 1XHP Compare |
1Z7F | 1Z7F | A | 32 | 16 | 2.1 | 10-18-05 | synthetic | CRYSTAL STRUCTURE OF 16 BASE PAIR RNA DUPLEX CONTAINING A C- A MISMATCH | C.M.GHERGHE,J.M.KRAHN,K.M.WEEKS | |
1KAJ | 1KAJ | A | 32 | 9 | SOLUTION NMR | 7-11-96 | synthetic | CONFORMATION OF AN RNA PSEUDOKNOT FROM MOUSE MAMMARY TUMOR VIRUS, NMR, 1 STRUCTURE | H.KANG,J.V.HINES,I.TINOCO JUNIOR | |
2LI4 | 2LI4 | A | 640 | 280 | SOLUTION NMR | 8-22-12 | YERSINIA ENTEROCOLITICA | SOLUTION STRUCTURE OF A SHORTENED ANTITERMINATOR HAIRPIN FROM A MG2+ RIBOSWITCH | M.M.T.KORTH,R.K.O.SIGEL | |
3BO0 | 3BO0 | DEFG | 105 | 32 | 9.6 | 12-09-08 | ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI | RIBOSOME-SECY COMPLEX | C.W.AKEY,J.F.MENETRET | 3BO1 Compare |
3CZW | 3CZW | X | 28 | 14 | 1.4 | 9-09-08 | synthetic | X-RAY STRUCTURES OF THE (GUGGUCUGAUGAGGCC) RNA DUPLEX | W.RYPNIEWSKI,D.A.ADAMIAK,J.MILECKI,R.W.ADAMIAK | 3D0M Compare |
2LUP | 2LUP | A | 512 | 226 | SOLUTION NMR | 7-04-12 | synthetic | RDC REFINED SOLUTION STRUCTURE OF DOUBLE-STRANDED RNA BINDING DOMAIN OF S. CEREVISIAE RNASE III (RNT1P) IN COMPLEX WITH THE TERMINAL RNA HAIRPIN OF SNR47 PRECURSOR | Z.WANG,J.FEIGON | |
2LBS | 2LBS | A | 512 | 224 | SOLUTION NMR | 8-31-11 | synthetic | SOLUTION STRUCTURE OF DOUBLE-STRANDED RNA BINDING DOMAIN OF S. CEREVISIAE RNASE III (RNT1P) IN COMPLEX WITH AAGU TETRALOOP HAIRPIN | Z.WANG,E.HARTMAN,K.ROY,G.CHANFREAU,J.FEIGON | 1T4L Compare |
3ID5 | 3ID5 | D | 64 | 16 | 4.0 | 8-25-09 | synthetic | CRYSTAL STRUCTURE OF SULFOLOBUS SOLFATARICUS C/D RNP ASSEMBLED WITH NOP5, FIBRILLARIN, L7AE AND A SPLIT HALF C/D RNA | K.YE | |
3DKN | 3DKN | DEF | 69 | 30 | 8.7 | 8-19-08 | CANIS LUPUS FAMILIARIS,CANIS LUPUS FAMILIARIS,CANIS LUPUS FAMILIARIS | SEC61 IN THE CANINE RIBOSOME-CHANNEL COMPLEX FROM THE ENDOPLASMIC RETICULUM | J.-F.MENETRET,C.AKEY | |
3SIV | 3SIV | CF | 128 | 49 | 3.3 | 8-10-11 | HOMO SAPIENS | STRUCTURE OF A HPRP31-15.5K-U4ATAC 5' STEM LOOP COMPLEX, DIMERIC FORM | S.LIU,H.GHALEI,R.LUHRMANN,M.C.WAHL | |
1KPD | 1KPD | A | 32 | 10 | SOLUTION NMR | 4-01-97 | synthetic | A MUTANT RNA PSEUDOKNOT THAT PROMOTES RIBOSOMAL FRAMESHIFTING IN MOUSE MAMMARY TUMOR VIRUS, NMR, MINIMIZED AVERAGE STRUCTURE | H.KANG,I.TINOCO JUNIOR | |
2LWK | 2LWK | A | 512 | 191 | SOLUTION NMR | 8-29-12 | synthetic | SOLUTION STRUCTURE OF SMALL MOLECULE-INFLUENZA RNA COMPLEX | M.-K.LEE,G.VARANI,B.-S.CHOI,M.PELLECCHIA | |
1MFY | 1MFY | A | 496 | 126 | SOLUTION NMR | 9-18-02 | synthetic | SOLUTION STRUCTURE OF INFLUENZA A VIRUS C4 PROMOTER | M.-K.LEE,S.-H.BAE,C.-J.PARK,H.-K.CHEONG,C.CHEONG,B.-S.CHOI | |
1LVJ | 1LVJ | A | 372 | 134 | SOLUTION NMR | 12-11-02 | HUMAN IMMUNODEFICIENCY VIRUS 1 | STRUCTURE OF TAR RNA COMPLEXED WITH A TAT-TAR INTERACTION NANOMOLAR INHIBITOR THAT WAS IDENTIFIED BY COMPUTATIONAL SCREENING | Z.DU,K.E.LIND,T.L.JAMES | |
1YLG | 1YLG | A | 620 | 227 | SOLUTION NMR | 2-01-05 | synthetic | NMR STRUCTURE OF THE APOB MRNA STEM-LOOP AND ITS INTERACTION WITH THE C TO U EDITING APOBEC1 COMPLEMENTARY FACTOR | C.MARIS,J.MASSE,F.H.ALLAIN,A.CHESTER,N.NAVARATNAM | |
1YNE | 1YNE | A | 620 | 219 | SOLUTION NMR | 2-08-05 | synthetic | NMR STRUCTURE OF THE APOB MRNA STEM-LOOP AND ITS INTERACTION WITH THE C TO U EDITING APOBEC1 COMPLEMENTARY FACTOR | C.MARIS,J.MASSE,F.H.ALLAIN,A.CHESTER,N.NAVARATNAM | |
1JBR | 1JBR | CF | 61 | 26 | 2.1 | 10-26-01 | synthetic,synthetic,synthetic | CRYSTAL STRUCTURE OF THE RIBOTOXIN RESTRICTOCIN AND A 31- MER SRD RNA INHIBITOR | X.YANG,T.GERCZEI,L.GLOVER,C.C.CORRELL | 1JBT Compare |
1YNG | 1YNG | A | 496 | 163 | SOLUTION NMR | 2-08-05 | synthetic | NMR STRUCTURE OF THE APOB MRNA STEM-LOOP AND ITS INTERACTION WITH THE C TO U EDITING APOBEC1 COMPLEMENTARY FACTOR | C.MARIS,J.MASSE,F.H.ALLAIN,A.CHESTER,N.NAVARATNAM | |
1JO7 | 1JO7 | A | 992 | 289 | SOLUTION NMR | 9-19-01 | synthetic | SOLUTION STRUCTURE OF INFLUENZA A VIRUS PROMOTER | S.-H.BAE,H.-K.CHEONG,J.-H.LEE,C.CHEONG,M.KAINOSHO,B.-S.CHOI | |
2LDT | 2LDT | A | 403 | 140 | SOLUTION NMR | 9-07-11 | synthetic | THE 912-888 ALTERNATE CONFORMATION FOR HELIX 27 OF E.COLI 16S RRNA | M.N.SPANO,N.G.WALTER | |
1VFG | 1VFG | C | 31 | 8 | 2.8 | 8-10-04 | synthetic | CRYSTAL STRUCTURE OF TRNA NUCLEOTIDYLTRANSFERASE COMPLEXED WITH A PRIMER TRNA AND AN INCOMING ATP ANALOG | K.TOMITA,S.FUKAI,R.ISHITANI,T.UEDA,N.TAKEUCHI,D.G.VASSYLYEV, O.NUREKI,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | |
1YNC | 1YNC | A | 620 | 210 | SOLUTION NMR | 2-08-05 | synthetic | NMR STRUCTURE OF THE APOB MRNA STEM-LOOP AND ITS INTERACTION WITH THE C TO U EDITING APOBEC1 COMPLEMENTARY FACTOR | C.MARIS,J.MASSE,F.H.ALLAIN,A.CHESTER,N.NAVARATNAM | |
1EBR | 1EBR | A | 150 | 61 | SOLUTION NMR | 7-07-97 | synthetic | STRUCTURE OF RNA (5'-GGUGGGCGCAGCUUCGGCUGCGGUACCAC-3'), NMR, 5 STRUCTURES | R.D.PETERSON,J.FEIGON | |
1LDZ | 1LDZ | A | 750 | 253 | SOLUTION NMR | 11-25-98 | synthetic | SOLUTION STRUCTURE OF THE LEAD-DEPENDENT RIBOZYME, NMR, 25 STRUCTURES | C.G.HOOGSTRATEN,P.LEGAULT,A.PARDI | 2LDZ Compare |
1NA2 | 1NA2 | A | 540 | 198 | SOLUTION NMR | 1-21-03 | synthetic | SOLUTION STRUCTURE OF THE P2B HAIRPIN FROM HUMAN TELOMERASE RNA | C.A.THEIMER,L.D.FINGER,L.TRANTIREK,J.FEIGON | |
1AJU | 1AJU | A | 600 | 229 | SOLUTION NMR | 12-17-97 | synthetic | HIV-2 TAR-ARGININAMIDE COMPLEX, NMR, 20 STRUCTURES | A.S.BRODSKY,J.R.WILLIAMSON | |
1AUD | 1AUD | B | 930 | 213 | SOLUTION NMR | 2-25-98 | synthetic | U1A-UTRRNA, NMR, 31 STRUCTURES | F.H.-T.ALLAIN,C.C.GUBSER,P.W.A.HOWE,K.NAGAI,D.NEUHAUS, G.VARANI | |
364D | 364D | ABC | 59 | 24 | 3.0 | 1-02-98 | ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI | .0 A STRUCTURE OF FRAGMENT I FROM E. COLI 5S RRNA | C.C.CORRELL,B.FREEBORN,P.B.MOORE,T.A.STEITZ | 357D Compare |
1EKZ | 1EKZ | B | 1080 | 459 | SOLUTION NMR | 8-21-00 | DROSOPHILA MELANOGASTER | NMR STRUCTURE OF THE COMPLEX BETWEEN THE THIRD DSRBD FROM DROSOPHILA STAUFEN AND A RNA HAIRPIN | A.RAMOS,S.GRUNERT,M.BYCROFT,D.ST JOHNSTON,G.VARANI | |
1HVU | 1HVU | C | 120 | 36 | 4.8 | 1-13-99 | synthetic | HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 REVERSE TRANSCRIPTASE COMPLEXED WITH A 33-BASE NUCLEOTIDE RNA PSEUDOKNOT | J.JAEGER,T.RESTLE,T.A.STEITZ | |
1RFR | 1RFR | A | 600 | 259 | SOLUTION NMR | 3-23-04 | HUMAN COXSACKIEVIRUS B3 | NMR STRUCTURE OF THE 30MER STEMLOOP-D OF COXSACKIEVIRAL RNA | O.OHLENSCHLAGER,J.WOHNERT,E.BUCCI,S.SEITZ,S.HAFNER, R.RAMACHANDRAN,R.ZELL,M.GORLACH | |
1HWQ | 1HWQ | A | 600 | 220 | SOLUTION NMR | 5-16-01 | synthetic | SOLUTION STRUCTURE OF THE VS RIBOZYME SUBSTRATE STEM-LOOP | J.C.FLINDERS,T.DIECKMANN | |
1KP7 | 1KP7 | A | 30 | 10 | SOLUTION NMR | 4-10-02 | synthetic | CONSERVED RNA STRUCTURE WITHIN THE HCV IRES EIF3 BINDING SITE | J.GALLEGO,R.KLINCK,A.J.COLLIER,P.T.COLE,S.J.HARRIS, G.P.HARRISON,F.ABOUL-ELA,S.WALKER,G.VARANI | |
1AKX | 1AKX | A | 30 | 12 | SOLUTION NMR | 11-19-97 | synthetic | HIV-2 TRANS ACTIVATING REGION RNA COMPLEX WITH ARGININAMIDE, NMR, MINIMIZED AVERAGE STRUCTURE | A.S.BRODSKY,J.R.WILLIAMSON | |
3B5F | 3B5F | ABC | 60 | 29 | 2.7 | 8-12-08 | synthetic,synthetic,synthetic | CRYSTAL STRUCTURE OF A MINIMALLY HINGED HAIRPIN RIBOZYME INCORPORATING THE ADE38DAP MUTATION AND A 2',5' PHOSPHODIESTER LINKAGE AT THE ACTIVE SITE | C.MACELREVEY,J.KRUCINSKA,J.E.WEDEKIND | 3B91 3B58 3BBK 4G6P 3B5S 3BBI 3I2R 3B5A 3CR1 3BBM 3I2S 3I2Q 4G6S 3I2U 3CQS Compare |
2BH2 | 2BH2 | C | 58 | 10 | 2.1 | 3-30-05 | ESCHERICHIA COLI | CRYSTAL STRUCTURE OF E. COLI 5-METHYLURIDINE METHYLTRANSFERASE RUMA IN COMPLEX WITH RIBOSOMAL RNA SUBSTRATE AND S-ADENOSYLHOMOCYSTEINE. | T.T.LEE,S.AGARWALLA,R.M.STROUD | |
2K64 | 2K64 | AB | 720 | 320 | SOLUTION NMR | 7-14-09 | synthetic,synthetic | NMR SOLUTION STRUCTURE OF THE D3'-HAIRPIN INCLUDING EBS1 TOGETHER WITH IBS1 OF THE GROUP II INTRON SC.AI5(GAMMA) | D.KRUSCHEL,R.K.O.SIGEL | |
1JID | 1JID | B | 26 | 10 | 1.8 | 10-19-01 | synthetic | HUMAN SRP19 IN COMPLEX WITH HELIX 6 OF HUMAN SRP RNA | K.WILD,I.SINNING,S.CUSACK | 1L1W Compare |
3SNP | 3SNP | C | 58 | 24 | 2.8 | 7-27-11 | synthetic | CRYSTAL STRUCTURE ANALYSIS OF IRON REGULATORY PROTEIN 1 IN COMPLEX WITH FERRITIN H IRE RNA | K.VOLZ,A.I.SELEZNEVA,W.E.WALDEN | |
1UUD | 1UUD | B | 29 | 10 | SOLUTION NMR | 3-15-04 | HUMAN IMMUNODEFICIENCY VIRUS 1 (CLONE | NMR STRUCTURE OF A SYNTHETIC SMALL MOLECULE, RBT203, BOUND TO HIV-1 TAR RNA | B.DAVIS,M.AFSHAR,G.VARANI,J.KARN,A.I.H.MURCHIE,G.LENTZEN, M.J.DRYSDALE,A.J.POTTER,J.BOWER,F.ABOUL-ELA | |
3B31 | 3B31 | AB | 43 | 16 | 2.4 | 12-25-07 | synthetic,synthetic | CRYSTAL STRUCTURE OF DOMAIN III OF THE CRICKET PARALYSIS VIRUS IRES RNA | J.S.KIEFT,D.A.COSTANTINO,J.S.PFINGSTEN,R.P.RAMBO | 3MJA 3MJ3 3MJB Compare |
2GIP | 2GIP | A | 560 | 260 | SOLUTION NMR | 6-20-06 | synthetic | SOLUTION STRUCTURE OF A PORTION OF THE 5'UTR OF HSPA MRNA FROM BRADYRHIZOBIUM JANPONICUM HAVING DELETED G83 | S.CHOWDHURY,C.MARIS,F.H.ALLAIN,F.NARBERHAUS | 2GIO Compare |
2KDQ | 2KDQ | B | 290 | 108 | SOLUTION NMR | 6-23-09 | synthetic | SIMULTANEOUS RECOGNITION OF HIV-1 TAR RNA BULGE AND LOOP SEQUENCES BY CYCLIC PEPTIDE MIMIC OF TAT PROTEIN | A.DAVIDSON,T.C.LEEPER,G.VARANI | |
2K63 | 2K63 | A | 580 | 193 | SOLUTION NMR | 7-14-09 | synthetic | NMR SOLUTION STRUCTURE OF THE D3'-HAIRPIN INCLUDING THE EXON BINDING SITE 1 (EBS1) OF THE GROUP II INTRON SC.AI5(GAMMA) | D.KRUSCHEL,R.K.O.SIGEL | |
1EBS | 1EBS | A | 145 | 62 | SOLUTION NMR | 7-07-97 | synthetic | STRUCTURE OF RNA (5'-GGUGGGCGCAGCUUCGGCUGCGGUACCAC-3'), NMR, 5 STRUCTURES | R.D.PETERSON,J.FEIGON | |
1UUI | 1UUI | B | 29 | 11 | SOLUTION NMR | 2-12-04 | HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 | NMR STRUCTURE OF A SYNTHETIC SMALL MOLECULE, RBT158, BOUND TO HIV-1 TAR RNA | B.DAVIS,M.AFSHAR,G.VARANI,J.KARN,A.I.H.MURCHIE,G.LENTZEN, M.J.DRYSDALE,A.J.POTTER,J.BOWER,F.ABOUL-ELA | |
1NBR | 1NBR | A | 435 | 168 | SOLUTION NMR | 3-04-03 | synthetic | IRON RESPONSIVE ELEMENT RNA HAIRPIN, NMR, 15 STRUCTURES | S.A.MCCALLUM,A.PARDI | |
2K5Z | 2K5Z | A | 290 | 111 | SOLUTION NMR | 7-14-09 | synthetic | SOLUTION STRUCTURE AND DYNAMICS OF THE APICAL STEM-LOOP OF DUCK HEPATITIS B VIRUS | K.A.M.AMPT,M.TESSARI,S.S.WIJMENGA | |
3SN2 | 3SN2 | B | 29 | 12 | 3.0 | 11-23-11 | synthetic | CRYSTAL STRUCTURE ANALYSIS OF IRON REGULATORY PROTEIN 1 IN COMPLEX WITH TRANSFERRIN RECEPTOR IRE B RNA | K.VOLZ,A.I.SELEZNEVA,W.E.WALDEN | |
1UTS | 1UTS | B | 464 | 150 | SOLUTION NMR | 2-12-04 | HUMAN IMMUNODEFICIENCY VIRUS 1 | DESIGNED HIV-1 TAR BINDING LIGAND | B.DAVIS,A.I.H.MURCHIE,F.ABOUL-ELA,J.KARN | |
2L8H | 2L8H | A | 290 | 102 | SOLUTION NMR | 3-23-11 | synthetic | CHEMICAL PROBE BOUND TO HIV TAR RNA | A.DAVIDSON,D.BEGLEY,C.LAU,G.VARANI | |
1ARJ | 1ARJ | N | 580 | 174 | SOLUTION NMR | 11-08-96 | synthetic | ARG-BOUND TAR RNA, NMR | F.ABOUL-ELA,G.VARANI,J.KARN | |
1ANR | 1ANR | A | 580 | 151 | SOLUTION NMR | 1-11-97 | synthetic | CIS-ACTING RNA REGULATORY ELEMENT (HIV-1 TAR), NMR, 20 STRUCTURES | F.ABOUL-ELA,G.VARANI,J.KARN | |
1SCL | 1SCL | A | 174 | 61 | SOLUTION NMR | 1-26-95 | RATTUS NORVEGICUS | THE SARCIN-RICIN LOOP, A MODULAR RNA | A.A.SZEWCZAK,P.B.MOORE | |
2KX5 | 2KX5 | A | 290 | 110 | SOLUTION NMR | 7-07-10 | synthetic | RECOGNITION OF HIV TAR RNA BY PEPTIDE MIMETIC OF TAT PROTEIN | A.DAVIDSON,K.PATORA-KOMISARSKA,J.ROBINSON,G.VARANI | |
1L1C | 1L1C | C | 29 | 12 | SOLUTION NMR | 3-27-02 | BACILLUS SUBTILIS | STRUCTURE OF THE LICT BACTERIAL ANTITERMINATOR PROTEIN IN COMPLEX WITH ITS RNA TARGET | Y.YANG,N.DECLERCK,X.MANIVAL,S.AYMERICH,M.KOCHOYAN | |
1FQZ | 1FQZ | A | 27 | 12 | SOLUTION NMR | 1-17-01 | synthetic | NMR VALIDATED MODEL OF DOMAIN IIID OF HEPATITIS C VIRUS INTERNAL RIBOSOME ENTRY SITE | R.KLINCK,E.WESTHOF,S.WALKER,M.AFSHAR,A.COLLIER,F.ABOUL-ELA | 1F84 Compare |
1EBQ | 1EBQ | A | 145 | 65 | SOLUTION NMR | 7-07-97 | synthetic | STRUCTURE OF RNA (5'-GGUGGGCGCAGCUUCGGCUGCGGUACCAC-3'), NMR, 5 STRUCTURES | R.D.PETERSON,J.FEIGON | |
1QD3 | 1QD3 | A | 493 | 163 | SOLUTION NMR | 7-12-00 | HUMAN IMMUNODEFICIENCY VIRUS 1 | HIV-1 TAR RNA/NEOMYCIN B COMPLEX | C.FABER,H.STICHT,P.ROESCH | |
1OOA | 1OOA | D | 58 | 18 | 2.5 | 7-22-03 | synthetic | CRYSTAL STRUCTURE OF NF-KB(P50)2 COMPLEXED TO A HIGH- AFFINITY RNA APTAMER | D.B.HUANG,D.VU,L.A.CASSIDAY,J.M.ZIMMERMAN,L.J.MAHER III, G.GHOSH | |
2JWV | 2JWV | A | 290 | 100 | SOLUTION NMR | 1-08-08 | synthetic | STRUCTURE OF A HIGH AFFINITY ANTI-NFKB RNA APTAMER | N.J.REITER,L.MAHER III,S.E.BUTCHER | |
1AQO | 1AQO | A | 435 | 148 | SOLUTION NMR | 2-04-98 | synthetic | IRON RESPONSIVE ELEMENT RNA HAIRPIN, NMR, 15 STRUCTURES | K.J.ADDESS,A.PARDI | |
28SR | 28SR | A | 28 | 11 | SOLUTION NMR | 4-20-99 | ESCHERICHIA COLI | NMR STRUCTURE OF THE MOST CONSERVED RNA MOTIF IN SRP RNA | U.SCHMITZ,T.L.JAMES,P.LUKAVSKY,P.WALTER | 28SP Compare |
1ZBN | 1ZBN | A | 280 | 95 | SOLUTION NMR | 4-19-05 | synthetic | SOLUTION STRUCTURE OF BIV TAR HAIRPIN COMPLEXED TO JDV TAT ARGININE-RICH MOTIF | V.CALABRO,M.D.DAUGHERTY,A.D.FRANKEL | |
1MNB | 1MNB | B | 28 | 12 | SOLUTION NMR | 1-27-97 | synthetic | BIV TAT PEPTIDE (RESIDUES 68-81), NMR, MINIMIZED AVERAGE STRUCTURE | J.D.PUGLISI,L.CHEN,S.BLANCHARD,A.D.FRANKEL | |
1Q96 | 1Q96 | AC | 81 | 37 | 1.8 | 11-25-03 | synthetic | CRYSTAL STRUCTURE OF A MUTANT OF THE SARCIN/RICIN DOMAIN FROM RAT 28S RRNA | C.C.CORRELL,J.BENEKEN,M.J.PLANTINGA,M.LUBBERS,Y.L.CHAN | 1Q93 430D Compare |
3SIU | 3SIU | C | 56 | 20 | 2.6 | 8-10-11 | HOMO SAPIENS | STRUCTURE OF A HPRP31-15.5K-U4ATAC 5' STEM LOOP COMPLEX, MONOMERIC FORM | S.LIU,H.GHALEI,R.LUHRMANN,M.C.WAHL | |
1BIV | 1BIV | A | 140 | 56 | SOLUTION NMR | 12-23-96 | synthetic | BOVINE IMMUNODEFICIENCY VIRUS TAT-TAR COMPLEX, NMR, 5 STRUCTURES | X.YE,R.A.KUMAR,D.J.PATEL | |
2EZ6 | 2EZ6 | CD | 56 | 26 | 2.0 | 2-07-06 | synthetic | CRYSTAL STRUCTURE OF AQUIFEX AEOLICUS RNASE III (D44N) COMPLEXED WITH PRODUCT OF DOUBLE-STRANDED RNA PROCESSING | J.GAN,J.E.TROPEA,B.P.AUSTIN,D.L.COURT,D.S.WAUGH,X.JI | 2NUF Compare |
3O7V | 3O7V | A | 26 | 12 | 2.1 | 1-12-11 | synthetic | CRYSTAL STRUCTURE OF HUMAN HIWI1 (V361M) PAZ DOMAIN (RESIDUES 277-399) IN COMPLEX WITH 14-MER RNA (12-BP + 2-NT OVERHANG) CONTAINING 2'-OCH3 AT ITS 3'-END | Y.TIAN,D.K.SIMANSHU,J.-B.MA,D.J.PATEL | 3O6E 3O3I Compare |
2A9X | 2A9X | 2 | 280 | 119 | SOLUTION NMR | 11-01-05 | synthetic | TAR RNA RECOGNITION BY A CYCLIC PEPTIDOMIMETIC OF TAT PROTEIN | T.C.LEEPER,Z.ATHANASSIOU,R.L.DIAS,J.A.ROBINSON,G.VARANI | |
2KMJ | 2KMJ | A | 280 | 114 | SOLUTION NMR | 8-18-09 | HUMAN IMMUNODEFICIENCY VIRUS 2 | HIGH RESOLUTION NMR SOLUTION STRUCTURE OF A COMPLEX OF HIV-2 TAR RNA AND A SYNTHETIC TRIPEPTIDE IN A 1:2 STOICHIOMETRY | J.FERNER,M.SUHARTONO,S.BREITUNG,H.R.A.JONKER,M.HENNIG, J.WOEHNERT,M.GOEBEL,H.SCHWALBE | |
1D4R | 1D4R | AB | 54 | 22 | 2.0 | 12-02-99 | synthetic,synthetic | -MER FRAGMENT OF HUMAN SRP RNA HELIX 6 | K.WILD,O.WEICHENRIEDER,G.A.LEONARD,S.CUSACK | |
2AP5 | 2AP5 | A | 27 | 13 | SOLUTION NMR | 9-05-06 | synthetic | SOLUTION STRUCTURE OF THE C27A SCYLV P1-P2 FRAMESHIFTING PSEUDOKNOT, AVERAGE STRUCTURE | P.V.CORNISH,D.P.GIEDROC | 2AP0 Compare |
1KPZ | 1KPZ | A | 27 | 10 | SOLUTION NMR | 1-11-02 | synthetic | PEMV-1 P1-P2 FRAMESHIFTING PSEUDOKNOT REGULARIZED AVERAGE STRUCTURE | P.L.NIXON,D.P.GIEDROC | 1KPY Compare |
2X7N | 2X7N | A | 27 | 12 | 11.8 | 3-31-10 | SACCHAROMYCES CEREVISIAE | MECHANISM OF EIF6S ANTI-ASSOCIATION ACTIVITY | M.GARTMANN,M.BLAU,J.-P.ARMACHE,T.MIELKE,M.TOPF,R.BECKMANN | |
1XSG | 1XSG | A | 27 | 12 | SOLUTION NMR | 12-28-04 | synthetic | SOLUTION STRUCTURE OF E.COLI RNASE P RNA P4 STEM OLIGORIBONUCLEOTIDE, U69A MUTATION | M.SCHMITZ | 1XST 1XSH 2CD3 1F79 1XSU 2CD6 1F7G 1F7I Compare |
2AHT | 2AHT | A | 540 | 219 | SOLUTION NMR | 10-17-06 | synthetic | SOLUTION STRUCTURE OF DOMAIN 6 FROM THE AI5(GAMMA)GROUP II INTRON | M.C.ERAT,O.ZERBE,T.FOX,R.K.O.SIGEL | |
2IXY | 2IXY | A | 621 | 251 | SOLUTION NMR | 9-06-06 | HEPATITIS B VIRUS | SOLUTION STRUCTURE OF THE APICAL STEM-LOOP OF THE HUMAN HEPATITIS B VIRUS ENCAPSIDATION SIGNAL | S.FLODELL,M.PETERSEN,F.GIRARD,J.ZDUNEK,K.KIDD-LJUNGGREN, J.SCHLEUCHER,S.S.WIJMENGA | |
3DVZ | 3DVZ | A | 27 | 10 | 1.0 | 3-24-09 | synthetic | CRYSTAL STRUCTURE OF THE SARCIN/RICIN DOMAIN FROM E. COLI 23 S RRNA | V.OLIERIC,U.RIEDER,K.LANG,A.SERGANOV,C.SCHULZE-BRIESE,R.MICURA, P.DUMAS,E.ENNIFAR | 483D 1Q9A 480D 1MSY 3S8U 3S7C 3DW6 3DW4 3DW7 3DW5 Compare |
2LQZ | 2LQZ | A | 243 | 73 | SOLUTION NMR | 8-01-12 | synthetic | STRUCTURE OF THE RNA CLAW OF THE DNA PACKAGING MOTOR OF BACTERIOPHAGE 29 | E.J.HARJES,H.J.MATSUO,A.J.KITAMURA | |
1L2X | 1L2X | A | 27 | 15 | 1.2 | 3-22-02 | synthetic | ATOMIC RESOLUTION CRYSTAL STRUCTURE OF A VIRAL RNA PSEUDOKNOT | M.EGLI,G.MINASOV,L.SU,A.RICH | 437D 1L3D Compare |
1BYJ | 1BYJ | A | 1026 | 381 | SOLUTION NMR | 10-29-99 | synthetic | GENTAMICIN C1A A-SITE COMPLEX | S.YOSHIZAWA,D.FOURMY,J.D.PUGLISI | 1PBR Compare |
2B63 | 2B63 | R | 27 | 6 | 3.8 | 12-06-05 | synthetic | COMPLETE RNA POLYMERASE II-RNA INHIBITOR COMPLEX | H.KETTENBERGER,A.EISENFUEHR,F.BRUECKNER,M.THEIS,M.FAMULOK, P.CRAMER | |
484D | 484D | B | 594 | 219 | SOLUTION NMR | 10-14-99 | synthetic | SOLUTION STRUCTURE OF HIV-1 REV PEPTIDE-RNA APTAMER COMPLEX | X.YE,A.A.GORIN,R.FREDERICK,W.HU,A.MAJUMDAR,W.XU,G.MCLENDON, A.ELLINGTON,D.J.PATEL | |
1F7F | 1F7F | A | 243 | 90 | SOLUTION NMR | 10-09-00 | synthetic | SOLUTION STRUCTURE OF THE RNASE P RNA (M1 RNA) P4 STEM OLIGORIBONUCLEOTIDE, NMR, ENSEMBLE OF 9 STRUCTURES | M.SCHMITZ,I.TINOCO JR. | 2CD1 1F78 1F6X 2CD5 Compare |
2LDL | 2LDL | A | 324 | 120 | SOLUTION NMR | 12-28-11 | HUMAN IMMUNODEFICIENCY VIRUS 1 | SOLUTION NMR STRUCTURE OF THE HIV-1 EXON SPLICING SILENCER 3 | C.MISHLER,J.D.LEVENGOOD,C.A.JOHNSON,P.RAJAN,B.M.ZNOSKO | |
1XOK | 1XOK | AB | 36 | 13 | 3.0 | 1-04-05 | synthetic,synthetic | CRYSTAL STRUCTURE OF ALFALFA MOSAIC VIRUS RNA 3'UTR IN COMPLEX WITH COAT PROTEIN N TERMINAL PEPTIDE | L.M.GUOGAS,D.J.FILMAN,J.M.HOGLE,L.GEHRKE | |
1FYO | 1FYO | A | 675 | 244 | SOLUTION NMR | 3-14-01 | synthetic | EUKARYOTIC DECODING REGION A-SITE RNA | S.R.LYNCH,J.D.PUGLISI | |
1F6Z | 1F6Z | A | 27 | 10 | SOLUTION NMR | 10-09-00 | synthetic | SOLUTION STRUCTURE OF THE RNASE P RNA (M1 RNA) P4 STEM C70U MUTANT OLIGORIBONUCLEOTIDE | M.SCHMITZ,I.TINOCO JR. | |
1TOB | 1TOB | A | 189 | 76 | SOLUTION NMR | 6-16-97 | synthetic | SACCHARIDE-RNA RECOGNITION IN AN AMINOGLYCOSIDE ANTIBIOTIC- RNA APTAMER COMPLEX, NMR, 7 STRUCTURES | L.JIANG,A.K.SURI,R.FIALA,D.J.PATEL | |
1YG4 | 1YG4 | A | 27 | 13 | SOLUTION NMR | 12-13-05 | synthetic | SOLUTION STRUCTURE OF THE SCYLV P1-P2 FRAMESHIFTING PSEUDOKNOT, REGULARIZED AVERAGE STRUCTURE | P.V.CORNISH,M.HENNIG,D.P.GIEDROC | |
1FYP | 1FYP | A | 783 | 283 | SOLUTION NMR | 3-14-01 | synthetic | EUKARYOTIC DECODING REGION A-SITE RNA-PAROMOMYCIN COMPLEX | S.R.LYNCH,J.D.PUGLISI | |
2LJJ | 2LJJ | A | 27 | 8 | SOLUTION NMR | 9-19-12 | synthetic | THE STRUCTURE OF SUBDOMAIN IV-B FROM THE CVB-3 IRES | Y.IHLE,R.ZELL,M.GOERLACH | |
1F7H | 1F7H | A | 297 | 110 | SOLUTION NMR | 10-09-00 | synthetic | SOLUTION STRUCTURE OF THE RNASE P RNA (M1 RNA) P4 STEM OLIGORIBONUCLEOTIDE COMPLEXED WITH COBALT (III) HEXAMINE, NMR, ENSEMBLE OF 11 STRUCTURES | M.SCHMITZ,I.TINOCO JR. | |
1YSV | 1YSV | A | 351 | 153 | SOLUTION NMR | 7-19-05 | synthetic | SOLUTION STRUCTURE OF THE CENTRAL REGION OF THE HUMAN GLUR- B R/G PRE-MRNA | R.STEFL,F.H.ALLAIN | |
2KXM | 2KXM | A | 270 | 100 | SOLID-STATE NMR | 4-20-11 | synthetic | SOLUTION NMR STRUCTURE OF THE 27 NUCLEOTIDE ENGINEERED NEOMYCIN SENSING RIBOSWITCH RNA-RIBOSTMYCIN COMPLEX | D.ELKE,W.E.JULIA,O.OLIVER,S.R.SINA,S.BEATRIX,W.JENS | |
387D | 387D | A | 26 | 5 | 3.1 | 8-26-03 | synthetic | RNA PSEUDOKNOT WITH 3D DOMAIN SWAPPING | S.E.LIETZKE,C.E.KUNDROT,C.L.BARNES | |
413D | 413D | A | 26 | 12 | 1.8 | 7-10-98 | synthetic | A'-FORM RNA DOUBLE HELIX IN THE SINGLE CRYSTAL STRUCTURE OF R(UGAGCUUCGGCUC) | Y.TANAKA,S.FUJII,H.HIROAKI,T.SAKATA,T.TANAKA,S.UESUGI,K.- I.TOMITA,Y.KYOGOKU | |
2RFK | 2RFK | DEF | 61 | 24 | 2.9 | 2-05-08 | PYROCOCCUS FURIOSUS,PYROCOCCUS FURIOSUS,PYROCOCCUS FURIOSUS | SUBSTRATE RNA POSITIONING IN THE ARCHAEAL H/ACA RIBONUCLEOPROTEIN COMPLEX | B.LIANG,S.XUE,R.M.TERNS,M.P.TERNS,H.LI,SOUTHEAST COLLABORATORY FOR STRUCTURAL GENOMICS (SECSG) | |
4HXH | 4HXH | A | 26 | 6 | 2.6 | 1-30-13 | synthetic | STRUCTURE OF MRNA STEM-LOOP, HUMAN STEM-LOOP BINDING PROTEIN AND 3'HEXO TERNARY COMPLEX | D.TAN,L.TONG | |
2RP0 | 2RP0 | A | 728 | 309 | SOLUTION NMR | 3-31-09 | synthetic | REFINED SOLUTION STRUCTURE OF THE PEMV-1 MRNA PSEUDOKNOT, 28 LOWEST ENERGY STRUCTURES | P.V.CORNISH,M.HENNIG,D.P.GIEDROC | 2RP1 Compare |
1QWB | 1QWB | A | 442 | 150 | SOLUTION NMR | 11-25-03 | synthetic | NMR STRUCUTRE OF 5'-R(GGACACGAAAUCCCGAAGUAGUGUCC)-3' : AN RNA HAIRPIN CONTAINING THE IN VITRO SELECTED CONSENSUS SEQUENCE FOR NUCLEOLIN RBD12 | L.D.FINGER,L.TRANTIREK,C.JOHANSSON,J.FEIGON | |
2A43 | 2A43 | A | 26 | 14 | 1.3 | 9-27-05 | synthetic | CRYSTAL STRUCTURE OF A LUTEOVIRAL RNA PSEUDOKNOT AND MODEL FOR A MINIMAL RIBOSOMAL FRAMESHIFTING MOTIF | P.S.PALLAN,W.S.MARSHALL,J.HARP,F.C.JEWETT III,Z.WAWRZAK, B.A.BROWN II,A.RICH,M.EGLI | |
2F8T | 2F8T | CD | 50 | 24 | 3.1 | 10-31-06 | synthetic | CRYSTAL STRUCTURE OF AA-AGO WITH EXTERNALLY-BOUND SIRNA | Y.R.YUAN,H.Y.CHEN,D.J.PATEL | |
2L5Z | 2L5Z | A | 546 | 206 | SOLUTION NMR | 2-16-11 | NEUROSPORA | NMR STRUCTURE OF THE A730 LOOP OF THE NEUROSPORA VS RIBOZYME | G.DESJARDINS,E.BONNEAU,N.GIRARD,J.BOISBOUVIER,P.LEGAULT | |
1EI2 | 1EI2 | A | 425 | 119 | SOLUTION NMR | 3-06-00 | synthetic | STRUCTURAL BASIS FOR RECOGNITION OF THE RNA MAJOR GROOVE IN THE TAU EXON 10 SPLICING REGULATORY ELEMENT BY AMINOGLYCOSIDE ANTIBIOTICS | L.VARANI,M.G.SPILLANTINI,M GOEDERT,G.VARANI | |
488D | 488D | ABCD | 65 | 33 | 3.1 | 3-06-00 | synthetic,synthetic,synthetic,synthetic | CATALYTIC RNA ENZYME-PRODUCT COMPLEX | J.B.MURRAY,H.SZOKE,A.SZOKE,W.G.SCOTT | 299D 301D 359D 300D 1NYI 1MME 1Q29 379D Compare |
1F8V | 1F8V | R | 25 | 0 | 3.0 | 12-06-00 | PARIACATO VIRUS | THE STRUCTURE OF PARIACOTO VIRUS REVEALS A DODECAHEDRAL CAGE OF DUPLEX RNA | L.TANG,K.N.JOHNSON,L.A.BALL,T.LIN,M.YEAGER,J.E.JOHNSON | |
1QC8 | 1QC8 | A | 725 | 206 | SOLUTION NMR | 8-31-99 | synthetic | NMR STRUCTURE OF TAU EXON 10 SPLICING REGULATORY ELEMENT RNA | L.VARANI,M.G.SPILLANTINI,A.KLUG,M.GOEDERT,G.VARANI | |
2KGP | 2KGP | A | 250 | 90 | SOLUTION NMR | 6-02-09 | synthetic | STRUCTURAL BASIS FOR STABILIZATION OF THE TAU PRE-MRNA SPLICING REGULATORY ELEMENT BY NOVANTRONE (MITOXANTRONE) | S.ZHENG,Y.CHEN,C.P.DONAHUE,M.S.WOLFE,G.VARANI | |
2QUX | 2QUX | F | 150 | 54 | 2.4 | 12-18-07 | PSEUDOMONAS PHAGE PP7 | PP7 COAT PROTEIN DIMER IN COMPLEX WITH RNA HAIRPIN | J.A.CHAO | |
1M82 | 1M82 | A | 775 | 287 | SOLUTION NMR | 6-03-03 | synthetic | SOLUTION STRUCTURE OF THE COMPLEMENTARY RNA PROMOTER OF INFLUENZA A VIRUS | C.-J.PARK,S.-H.BAE,M.-K.LEE,G.VARANI,B.-S.CHOI | |
3HJY | 3HJY | CDE | 60 | 22 | 3.6 | 6-23-09 | synthetic,synthetic,synthetic | STRUCTURE OF A FUNCTIONAL RIBONUCLEOPROTEIN PSEUDOURIDINE SYNTHASE BOUND TO A SUBSTRATE RNA | B.LIANG,J.ZHOU,E.KAHEN,R.M.TERNS,M.P.TERNS,H.LI | |
1KKS | 1KKS | A | 360 | 105 | SOLUTION NMR | 3-13-02 | synthetic | STRUCTURE OF THE HISTONE MRNA HAIRPIN REQUIRED FOR CELL CYCLE REGULATION OF HISTONE GENE EXPRESSION | K.ZANIER,I.LUYTEN,C.CROMBIE,B MULLER,D.SCHUEMPERLI, J.P.LINGE,M.NILGES,M.SATTLER | |
1LC6 | 1LC6 | A | 960 | 329 | SOLUTION NMR | 5-29-02 | synthetic | SOLUTION STRUCTURE OF THE U6 INTRAMOLECULAR STEM-LOOP RNA | A.HUPPLER,L.J.NIKSTAD,A.M.ALLMANN,D.A.BROW,S.E.BUTCHER | |
283D | 283D | A | 24 | 12 | 2.3 | 9-30-96 | engineered | A CURVED RNA HELIX INCORPORATING AN INTERNAL LOOP WITH G-A AND A-A NON-WATSON-CRICK BASE PAIRING | K.J.BAEYENS,H.L.DE BONDT,A.PARDI,S.R.HOLBROOK | |
3NVK | 3NVK | LS | 54 | 6 | 3.2 | 7-20-11 | synthetic,synthetic | STRUCTURAL BASIS FOR SUBSTRATE PLACEMENT BY AN ARCHAEAL BOX C/D RIBONUCLEOPROTEIN PARTICLE | S.XUE,R.WANG,H.LI | |
2HEM | 2HEM | A | 216 | 90 | SOLUTION NMR | 9-12-06 | synthetic | NMR STRUCTURE AND MG2+ BINDING OF AN RNA SEGMENT THAT UNDERLIES THE L7/L12 STALK IN THE E.COLI 50S RIBOSOMAL SUBUNIT. | Q.ZHAO,U.NAGASWAMY,H.LEE,Y.XIA,X.GAO,G.FOX | |
2KEZ | 2KEZ | A | 240 | 90 | SOLUTION NMR | 7-21-09 | synthetic | NMR STRUCTURE OF U6 ISL AT PH 8.0 | V.VENDITTI,S.E.BUTCHER | |
1NYB | 1NYB | B | 360 | 142 | SOLUTION NMR | 6-24-03 | ENTEROBACTERIA PHAGE PHI21 | SOLUTION STRUCTURE OF THE BACTERIOPHAGE PHI21 N PEPTIDE-BOXB RNA COMPLEX | C.D.CILLEY,J.R.WILLIAMSON | |
1ZBL | 1ZBL | C | 24 | 0 | 2.2 | 7-12-05 | synthetic | BACILLUS HALODURANS RNASE H CATALYTIC DOMAIN MUTANT D192N IN COMPLEX WITH 12-MER RNA/DNA HYBRID | M.NOWOTNY,S.A.GAIDAMAKOV,R.J.CROUCH,W.YANG | |
1SYZ | 1SYZ | A | 336 | 116 | SOLUTION NMR | 11-09-04 | synthetic | SOLUTION STRUCTURE OF THE S. CEREVISIAE U6 INTRAMOLECULAR STEM LOOP (ISL) RNA AT PH 5.7 | N.J.REITER,H.BLAD,F.ABILDGAARD,S.E.BUTCHER | |
3MIJ | 3MIJ | A | 24 | 12 | 2.6 | 2-16-11 | synthetic | CRYSTAL STRUCTURE OF A TELOMERIC RNA G-QUADRUPLEX COMPLEXED WITH AN ACRIDINE-BASED LIGAND. | G.W.COLLIE,S.NEIDLE,G.N.PARKINSON | |
1RHT | 1RHT | A | 24 | 6 | SOLUTION NMR | 6-03-95 | synthetic | -MER RNA HAIRPIN COAT PROTEIN BINDING SITE FOR BACTERIOPHAGE R17 (NMR, MINIMIZED AVERAGE STRUCTURE) | P.N.BORER,Y.LIN,S.WANG,M.W.ROGGENBUCK,J.M.GOTT, O.C.UHLENBECK,I.PELCZER | |
2Q1R | 2Q1R | A | 24 | 12 | 1.1 | 10-30-07 | engineered | CRYSTAL STRUCTURE ANALYSIS OF THE RNA DODECAMER CGCGAAUUAGCG, WITH A G-A MISMATCH. | F.LI,P.S.PALLAN | |
1NC0 | 1NC0 | A | 432 | 151 | SOLUTION NMR | 2-25-03 | synthetic | U80G U6 INTRAMOLECULAR STEM-LOOP RNA FROM SACCHAROMYCES CEREVISIAE | D.G.SASHITAL,A.M.ALLMANN,S.VAN DOREN,S.E.BUTCHER | |
2F4X | 2F4X | AB | 864 | 360 | SOLUTION NMR | 2-28-06 | synthetic | NMR SOLUTION OF HIV-1 LAI KISSING COMPLEX | F.KIEKEN,F.PAQUET,F.BRULE,J.PAOLETTI,G.LANCELOT | |
1A9N | 1A9N | Q | 48 | 12 | 2.4 | 9-23-98 | HOMO SAPIENS | CRYSTAL STRUCTURE OF THE SPLICEOSOMAL U2B''-U2A' PROTEIN COMPLEX BOUND TO A FRAGMENT OF U2 SMALL NUCLEAR RNA | S.R.PRICE,P.R.EVANS,K.NAGAI | |
2PN4 | 2PN4 | AB | 84 | 32 | 2.3 | 4-01-08 | synthetic,synthetic | CRYSTAL STRUCTURE OF HEPATITIS C VIRUS IRES SUBDOMAIN IIA | Q.ZHAO,Q.HAN,C.R.KISSINGER,P.A.THOMPSON | 2PN3 Compare |
2LK3 | 2LK3 | A | 240 | 96 | SOLUTION NMR | 2-22-12 | synthetic | U2/U6 HELIX I | J.E.BURKE,D.G.SASHITAL,X.E.ZUO,Y.WANG,S.E.BUTCHER | |
1MT4 | 1MT4 | A | 408 | 164 | SOLUTION NMR | 1-14-03 | synthetic | STRUCTURE OF 23S RIBOSOMAL RNA HAIRPIN 35 | I.LEBARS,S.YOSHIZAWA,A.R.STENHOLM,E.GUITTET,S.DOUTHWAITE, D.FOURMY | |
255D | 255D | A | 24 | 12 | 2.0 | 2-07-95 | synthetic | CRYSTAL STRUCTURE OF AN RNA DOUBLE HELIX INCORPORATING A TRACK OF NON-WATSON-CRICK BASE PAIRS | S.R.HOLBROOK,C.CHEONG,I.TINOCO JR,S.-H.KIM | |
2ANN | 2ANN | B | 23 | 6 | 2.3 | 10-24-06 | synthetic | CRYSTAL STRUCTURE (I) OF NOVA-1 KH1/KH2 DOMAIN TANDEM WITH 25 NT RNA HAIRPIN | L.MALININA,M.TEPLOVA,K.MUSUNURU,A.TEPLOV,J.C.DARNELL, S.K.BURLEY,R.B.DARNELL,D.J.PATEL | 2ANR Compare |
1SY4 | 1SY4 | A | 288 | 99 | SOLUTION NMR | 4-06-04 | synthetic | REFINED SOLUTION STRUCTURE OF THE S. CEREVISIAE U6 INTRAMOLECULAR STEM LOOP (ISL) RNA USING RESIDUAL DIPOLAR COUPLINGS (RDCS) | N.J.REITER,L.J.NIKSTAD,A.M.ALLMAN,R.J.JOHNSON,S.E.BUTCHER | |
2NOK | 2NOK | ABCD | 88 | 35 | 3.0 | 2-13-07 | synthetic,synthetic | CRYSTAL STRUCTURE OF AN RNA DOMAIN FROM HEPATITIS C VIRUS. | S.M.DIBROV,H.JOHNSTON-COS,Y.H.WENG | |
1TFN | 1TFN | A | 24 | 7 | SOLUTION NMR | 2-12-97 | synthetic | STRUCTURE REFINEMENT FOR A 24-NUCLEOTIDE RNA HAIRPIN, NMR, MINIMIZED AVERAGE STRUCTURE | D.J.KERWOOD,P.N.BORER | |
1E4P | 1E4P | A | 480 | 184 | SOLUTION NMR | 1-16-01 | NEUROSPORA SP. | STRUCTURE OF THE RIBOZYME SUBSTRATE HAIRPIN OF NEUROSPORA VS RNA. A CLOSE LOOK AT THE CLEAVAGE SITE | P.J.A.MICHIELS,C.H.J.SCHOUTEN,H.A.HEUS,C.W.HILBERS | |
2QH2 | 2QH2 | A | 480 | 180 | SOLUTION NMR | 9-25-07 | synthetic | SOLUTION STRUCTURE OF THE CR7 TERMINAL HAIRPIN LOOP FROM HUMAN TELOMERASE RNA | J.FEIGON,C.A.THEIMER,N CHIM,K.E.BREECE | |
3A6P | 3A6P | DE | 92 | 44 | 2.9 | 12-08-09 | synthetic,synthetic | CRYSTAL STRUCTURE OF EXPORTIN-5:RANGTP:PRE-MIRNA COMPLEX | C.OKADA,E.YAMASHITA,S.J.LEE,S.SHIBATA,J.KATAHIRA,A.NAKAGAWA, Y.YONEDA,T.TSUKIHARA | |
2FRL | 2FRL | A | 460 | 159 | SOLUTION NMR | 2-14-06 | synthetic | SOLUTION STRUCTURE OF THE HELIX II TEMPLATE BOUNDARY ELEMENT FROM TETRAHYMENA TELOMERASE RNA | R.J.RICHARDS,C.A.THEIMER,L.D.FINGER,J.FEIGON | |
2QEK | 2QEK | AB | 46 | 20 | 1.8 | 5-06-08 | synthetic | HIV-1 SUBTYPE F DIS RNA EXTENDED DUPLEX FORM | S.FREISZ,E.ENNIFAR,P.DUMAS | |
2ES5 | 2ES5 | A | 460 | 200 | SOLUTION NMR | 1-24-06 | synthetic | STRUCTURE OF THE SRE RNA | F.H.T.ALLAIN | 2ESE 2B6G Compare |
1JTJ | 1JTJ | A | 437 | 132 | SOLUTION NMR | 12-11-02 | synthetic | SOLUTION STRUCTURE OF HIV-1LAI MUTATED SL1 HAIRPIN | F.KIEKEN,E.ARNOULT,F.BARBAULT,F.PAQUET,T.HUYNH-DINH, J.PAOLETTI,D.GENEST,G.LANCELOT | |
1NLC | 1NLC | AB | 46 | 22 | 1.9 | 5-13-03 | synthetic | HIV-1 DIS(MAL) DUPLEX ZN-SOAKED | E.ENNIFAR,P.WALTER,P.DUMAS | 1WVD 1Y6T 1Y6S 462D 1O3Z 1Y73 1Y99 1Y95 1Y90 2OIJ 2OJ0 2OIY 3C44 3FAR 3DVV Compare |
1BVJ | 1BVJ | A | 483 | 181 | SOLUTION NMR | 12-09-98 | HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 | HIV-1 RNA A-RICH HAIRPIN LOOP | E.V.PUGLISI,J.D.PUGLISI | |
1MWL | 1MWL | AB | 42 | 18 | 2.4 | 2-18-03 | synthetic | CRYSTAL STRUCTURE OF GENETICIN BOUND TO THE EUBACTERIAL 16S RRNA A SITE | Q.VICENS,E.WESTHOF | 2BEE 2BE0 3S4P 2PWT 1YRJ 4F8U 2F4T 2ET4 2ET5 1LC4 2ET3 2ESJ 2G5Q 1J7T 4F8V 2ESI Compare |
1S2F | 1S2F | A | 23 | 9 | SOLUTION NMR | 8-31-04 | synthetic | AVERAGE SOLUTION STRUCTURE OF A PSEUDO-5'-SPLICE SITE FROM THE NEGATIVE REGULATOR OF SPLICING OF ROUS SARCOMA VIRUS | J.CABELLO-VILLEGAS,K.E.GILES,A.M.SOTO,P.YU,K.L.BEEMON, Y.X.WANG | |
1XPE | 1XPE | AB | 46 | 20 | 1.9 | 10-18-05 | synthetic | HIV-1 SUBTYPE B GENOMIC RNA DIMERIZATION INITIATION SITE | E.ENNIFAR,P.DUMAS | 1XP7 2B8R 2B8S 1XPF 2FD0 2FCY 1ZCI 1Y3S 1Y3O 1YXP 2FCX 2FCZ 1K9W Compare |
1S34 | 1S34 | A | 345 | 135 | SOLUTION NMR | 8-31-04 | synthetic | SOLUTION STRUCTURE OF RESIDUES 907-929 FROM ROUS SARCOMA VIRUS | J.CABELLO-VILLEGAS,K.E.GILES,A.M.SOTO,P.YU,K.L.BEEMON, Y.X.WANG | |
1TLR | 1TLR | A | 460 | 149 | SOLUTION NMR | 11-12-97 | synthetic | SOLUTION STRUCTURE OF TETRALOOP RECEPTOR RNA, NMR, 20 STRUCTURES | S.E.BUTCHER,T.DIECKMANN,J.FEIGON | |
3TS2 | 3TS2 | UV | 46 | 8 | 2.0 | 11-16-11 | synthetic | MOUSE LIN28A IN COMPLEX WITH LET-7G MICRORNA PRE-ELEMENT | Y.NAM,P.SLIZ | |
1MFK | 1MFK | A | 460 | 179 | SOLUTION NMR | 11-13-02 | synthetic | STRUCTURE OF PROKARYOTIC SECIS MRNA HAIRPIN | D.FOURMY,E.GUITTET,S.YOSHIZAWA | |
1BGZ | 1BGZ | A | 138 | 47 | SOLUTION NMR | 1-13-99 | synthetic | S8 RRNA BINDING SITE FROM E. COLI, NMR, 6 STRUCTURES | K.KALURACHCHI,E.P.NIKONOWICZ | |
2PJP | 2PJP | B | 23 | 10 | 2.3 | 10-30-07 | ESCHERICHIA COLI | STRUCTURE OF THE MRNA-BINDING DOMAIN OF ELONGATION FACTOR SELB FROM E.COLI IN COMPLEX WITH SECIS RNA | N.SOLER,D.FOURMY,S.YOSHIZAWA | |
1OW9 | 1OW9 | A | 253 | 99 | SOLUTION NMR | 5-20-03 | synthetic | NMR STRUCTURE OF THE ACTIVE CONFORMATION OF THE VS RIBOZYME CLEAVAGE SITE | B.HOFFMANN,G.T.MITCHELL,P.GENDRON,F.MAJOR,A.A.ANDERSEN, R.A.COLLINS,P.LEGAULT | |
1HYS | 1HYS | E | 23 | 0 | 3.0 | 3-26-01 | synthetic | CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH A POLYPURINE TRACT RNA:DNA | S.G.SARAFIANOS,K.DAS,C.TANTILLO,A.D.CLARK JR.,J.DING, J.WHITCOMB,P.L.BOYER,S.H.HUGHES,E.ARNOLD | |
1K5I | 1K5I | A | 230 | 91 | SOLUTION NMR | 10-17-01 | synthetic | NMR STRUCTURE OF A RIBOSOMAL RNA HAIRPIN CONTAINING A CONSERVED CUCAA PENTALOOP | U.NAGASWAMY,X.GAO,S.A.MARTINIS,G.E.FOX | |
2PLY | 2PLY | E | 46 | 20 | 2.6 | 11-06-07 | MOORELLA THERMOACETICA | STRUCTURE OF THE MRNA BINDING FRAGMENT OF ELONGATION FACTOR SELB IN COMPLEX WITH SECIS RNA. | N.SOLER,D.FOURMY,S.YOSHIZAWA | 2UWM 1WSU Compare |
4B3O | 4B3O | R | 23 | 0 | 3.3 | 1-16-13 | SYNTHETIC CONSTRUCT | STRUCTURES OF HIV-1 RT AND RNA-DNA COMPLEX REVEAL A UNIQUE RT CONFORMATION AND SUBSTRATE INTERFACE | M.LAPKOUSKI,L.TIAN,J.T.MILLER,S.F.J.LE GRICE,W.YANG | |
3PHP | 3PHP | A | 230 | 80 | SOLUTION NMR | 10-21-98 | synthetic | STRUCTURE OF THE 3' HAIRPIN OF THE TYMV PSEUDOKNOT: PREFORMATION IN RNA FOLDING | M.H.KOLK,M.VAN DER GRAAF,S.S.WIJMENGA,C.W.A.PLEIJ,H.A.HEUS, C.W.HILBERS | |
2QH3 | 2QH3 | A | 460 | 160 | SOLUTION NMR | 9-25-07 | synthetic | SOLUTION STRUCTURE OF THE U64 H/ACA SNORNA 3' TERMINAL HAIRPIN LOOP | J.FEIGON,C.A.THEIMER,N.CHIM,K.E.BREECE | |
1JU1 | 1JU1 | AB | 690 | 292 | SOLUTION NMR | 8-23-02 | synthetic | DIMER INITIATION SEQUENCE OF HIV-1LAI GENOMIC RNA: NMR SOLUTION STRUCTURE OF THE EXTENDED DUPLEX | F.GIRARD,F.BARBAULT,G.LANCELOT | |
1NEM | 1NEM | A | 207 | 88 | SOLUTION NMR | 8-31-99 | synthetic | SACCHARIDE-RNA RECOGNITION IN THE NEOMYCIN B / RNA APTAMER COMPLEX | L.JIANG,A.MAJUMDAR,W.HU,T.J.JAISHREE,W.XU,D.J.PATEL | |
1BAU | 1BAU | AB | 46 | 18 | SOLUTION NMR | 4-27-99 | synthetic | NMR STRUCTURE OF THE DIMER INITIATION COMPLEX OF HIV-1 GENOMIC RNA, MINIMIZED AVERAGE STRUCTURE | A.MUJEEB,J.L.CLEVER,T.M.BILLECI,T.L.JAMES,T.G.PARSLOW | |
2RO2 | 2RO2 | A | 23 | 9 | SOLUTION NMR | 12-30-08 | synthetic | SOLUTION STRUCTURE OF DOMAIN I OF THE NEGATIVE POLARITY CCHMVD HAMMERHEAD RIBOZYME | J.GALLEGO,D.DUFOUR,S.GAGO,M.DE LA PENA,R.FLORES | |
3BNL | 3BNL | AB | 44 | 21 | 2.6 | 6-24-08 | synthetic | CRYSTAL STRUCTURE OF THE BACTERIAL RIBOSOMAL DECODING A SITE IN THE PRESENCE OF [CO(NH3)6]CL3 | J.KONDO,E.WESTHOF | |
1YG3 | 1YG3 | A | 540 | 209 | SOLUTION NMR | 12-13-05 | synthetic | SOLUTION STRUCTURE OF THE SCYLV P1-P2 FRAMESHIFTING PSEUDOKNOT, 20 LOWEST ENERGY STRUCTURES | P.V.CORNISH,M.HENNIG,D.P.GIEDROC | |
1IKD | 1IKD | A | 660 | 206 | SOLUTION NMR | 4-01-97 | synthetic | ACCEPTOR STEM, NMR, 30 STRUCTURES | A.RAMOS,G.VARANI | |
3HTX | 3HTX | BC | 88 | 40 | 3.1 | 9-29-09 | synthetic,synthetic | CRYSTAL STRUCTURE OF SMALL RNA METHYLTRANSFERASE HEN1 | Y.HUANG,L.-J.JI,Q.-C.HUANG,D.G.VASSYLYEV,X.-M.CHEN,J.-B.MA | |
3J0E | 3J0E | ABCDEe | 108 | 38 | 9.9 | 4-25-12 | ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI | MODELS FOR THE T. THERMOPHILUS RIBOSOME RECYCLING FACTOR AND THE E. COLI ELONGATION FACTOR G BOUND TO THE E. COLI POST-TERMINATION COMPLEX | T.YOKOYAMA,T.R.SHAIKH,N.IWAKURA,H.KAJI,A.KAJI,R.K.AGRAWAL | |
3BNP | 3BNP | AB | 43 | 16 | 2.7 | 6-24-08 | synthetic,synthetic | CRYSTAL STRUCTURE OF THE HOMO SAPIENS MITOCHONDRIAL RIBOSOMAL DECODING SITE (A1555G MUTANT) | J.KONDO,E.WESTHOF | 3BNO 3BNN Compare |
2FQN | 2FQN | AB | 43 | 18 | 2.3 | 2-14-06 | synthetic | CRYSTAL STRUCTURE OF THE HOMO SAPIENS CYTOPLASMIC RIBOSOMAL DECODING A SITE | J.KONDO,A.URZHUMTSEV,E.WESTHOF | 2O3Y 2O3W 2G5K Compare |
2JYM | 2JYM | A | 330 | 135 | SOLUTION NMR | 4-29-08 | synthetic | SOLUTION STRUCTURE OF STEM-LOOP ALPHA OF THE HEPATITIS B VIRUS POST-TRANSCRIPTIONAL REGULATORY ELEMENT | O.OHLENSCHLAGER,M.GORLACH,M.SCHWALBE | |
1JUR | 1JUR | A | 198 | 76 | SOLUTION NMR | 1-16-02 | synthetic | SOLUTION STRUCTURE OF HELIX III IN XENOPUS OOCYTE 5S RRNA. | P.W.HUBER,J.P.RIFE,P.B.MOORE | |
1K6G | 1K6G | A | 440 | 183 | SOLUTION NMR | 12-19-01 | synthetic | SOLUTION STRUCTURE OF CONSERVED AGNN TETRALOOPS: INSIGHTS INTO RNT1P RNA PROCESSING | I.LEBARS,B.LAMONTAGNE,S.YOSHIZAWA,S.ABOU ELELA,D.FOURMY | |
1F9L | 1F9L | A | 22 | 9 | SOLUTION NMR | 7-26-00 | synthetic | SOLUTION STRUCTURE OF A 22-NUCLEOTIDE HAIRPIN SIMILAR TO THE P5ABC REGION OF A GROUP I RIBOZYME WITH COBALT(III) HEXAMMINE COMPLEXED TO THE GAAA TETRALOOP | S.RUDISSER,I.TINOCO JR. | |
3BNQ | 3BNQ | AB | 86 | 32 | 2.0 | 6-24-08 | synthetic,synthetic | CRYSTAL STRUCTURE OF THE HOMO SAPIENS MITOCHONDRIAL RIBOSOMAL DECODING SITE IN THE PRESENCE OF SRCL2 (A1555G MUTANT, BR-DERIVATIVE) | J.KONDO,E.WESTHOF | 3BNS 3BNR Compare |
3FTF | 3FTF | CD | 44 | 20 | 2.8 | 3-24-09 | synthetic | CRYSTAL STRUCTURE OF A. AEOLICUS KSGA IN COMPLEX WITH RNA AND SAH | C.TU,X.JI | 3FTE Compare |
2GV3 | 2GV3 | A | 440 | 163 | SOLUTION NMR | 8-08-06 | synthetic | TRANSLOCATION OF A TRNA WITH AN EXTENDED ANTICODON THROUGH THE RIBOSOME | S.S.PHELPS,C.GAUDIN,S.YOSHIZAWA,C.BENITEZ,D.FOURMY,S.JOSEPH | |
1FJE | 1FJE | A | 418 | 148 | SOLUTION NMR | 1-03-01 | synthetic | SOLUTION STRUCTURE OF NUCLEOLIN RBD12 IN COMPLEX WITH SNRE RNA | F.H.T.ALLAIN,P.BOUVET,T.DIECKMANN,J.FEIGON | |
1TJZ | 1TJZ | A | 440 | 166 | SOLUTION NMR | 9-28-04 | synthetic | SOLUTION STRUCTURE OF THE ACTIVE SITE STEM-LOOP OF THE VS RIBOZYME | J.FLINDERS,T.DIECKMANN | |
2GRW | 2GRW | A | 264 | 91 | SOLUTION NMR | 3-06-07 | synthetic | SOLUTION STRUCTURE OF THE POLIOVIRUS 3'-UTR Y-STEM | H.A.HEUS,J.ZOLL,M.TESSARI,F.J.M.VAN KUPPEVELD,W.J.G.MELCHERS | |
4ERD | 4ERD | CD | 44 | 19 | 2.6 | 6-20-12 | TETRAHYMENA THERMOPHILA | CRYSTAL STRUCTURE OF THE C-TERMINAL DOMAIN OF TETRAHYMENA TELOMERASE PROTEIN P65 IN COMPLEX WITH STEM IV OF TELOMERASE RNA | M.SINGH,Z.WANG,B.-K.KOO,A.PATEL,D.CASCIO,K.COLLINS,J.FEIGON | |
2GV4 | 2GV4 | A | 286 | 119 | SOLUTION NMR | 3-20-07 | synthetic | SOLUTION STRUCTURE OF THE POLIOVIRUS 3'-UTR Y-STEM | H.A.HEUS,J.ZOLL,M.TESSARI,F.J.M.VAN KUPPEVELD,W.J.G.MELCHERS | 1N66 Compare |
3MEI | 3MEI | AB | 44 | 19 | 2.0 | 1-26-11 | synthetic | REGULATORY MOTIF FROM THE THYMIDYLATE SYNTHASE MRNA | S.DIBROV,J.MCLEAN,T.HERMANN | |
1OSW | 1OSW | A | 506 | 181 | SOLUTION NMR | 5-20-03 | synthetic | THE STEM OF SL1 RNA IN HIV-1: STRUCTURE AND NUCLEOCAPSID PROTEIN BINDING FOR A 1X3 INTERNAL LOOP | Y.YUAN,D.J.KERWOOD,A.C.PAOLETTI,M.F.SHUBSDA,P.N.BORER | |
2O3V | 2O3V | AB | 43 | 17 | 2.8 | 11-06-07 | synthetic | CRYSTAL STRUCTURE OF THE HOMO SAPIENS CYTOPLASMIC RIBOSOMAL DECODING SITE COMPLEXED WITH PAROMAMINE DERIVATIVE NB33 | J.KONDO,M.HAINRICHSON,I.NUDELMAN,D.SHALLOM-SHEZIFI,T.BAASOV, E.WESTHOF | |
1NTB | 1NTB | AB | 40 | 15 | 2.9 | 5-13-03 | synthetic,synthetic | .9 A CRYSTAL STRUCTURE OF STREPTOMYCIN RNA-APTAMER COMPLEX | V.TERESHKO,E.SKRIPKIN,D.J.PATEL | 1NTA Compare |
2HNS | 2HNS | A | 440 | 180 | SOLUTION NMR | 10-31-06 | synthetic | STRUCTURE OF THE AAGU TETRALOOP | C.GAUDIN,F.FOURMY,S.YOSHIZAWA | |
2KD8 | 2KD8 | A | 264 | 108 | SOLUTION NMR | 1-19-10 | synthetic | SOLUTION STRUCTURE OF THE STEM-LOOP IIID OF GBV-B IRES | V.THIVIYANATHAN,R.KULASEGRAN SHYLINI,D.G.GORENSTEIN, K.KALUARACHCHI | |
3TD0 | 3TD0 | AB | 42 | 18 | 1.6 | 12-07-11 | synthetic | CRYSTAL STRUCTURE OF THE BACTERIAL A1408G-MUTANT AND THE PROTOZOA CYTOPLASMIC RIBOSOMAL DECODING SITE | J.KONDO | |
4A4S | 4A4S | A | 154 | 63 | SOLUTION NMR | 5-30-12 | THERMUS THERMOPHILUS | UNAC TETRALOOPS: TO WHAT EXTENT CAN THEY MIMIC GNRA TETRALOOPS | Q.ZHAO,H.HUANG,U.NAGASWAMY,Y.XIA,X.GAO,G.FOX | |
2JSE | 2JSE | A | 220 | 80 | SOLUTION NMR | 11-20-07 | synthetic | NMR REVEALS ABSENCE OF HYDROGEN BONDING IN ADJACENT UU AND AG MISMATCHES IN AN ISOLATED INTERNAL LOOP FROM RIBOSOMAL RNA. | N.SHANKAR | |
1PJY | 1PJY | A | 440 | 195 | SOLUTION NMR | 8-05-03 | synthetic | SOLUTION STRUCTURE OF THE HIV-1 FRAMESHIFT INDUCING STEM- LOOP RNA | D.W.STAPLE,S.E.BUTCHER | |
2F8S | 2F8S | CD | 44 | 18 | 3.0 | 10-31-06 | synthetic | CRYSTAL STRUCTURE OF AA-AGO WITH EXTERNALLY-BOUND SIRNA | Y.R.YUAN,H.Y.CHEN,D.J.PATEL | |
1DZ5 | 1DZ5 | CD | 572 | 182 | SOLUTION NMR | 3-29-00 | HOMO SAPIENS | THE NMR STRUCTURE OF THE 38KDA U1A PROTEIN-PIE RNA COMPLEX REVEALS THE BASIS OF COOPERATIVITY IN REGULATION OF POLYADENYLATION BY HUMAN U1A PROTEIN | L.VARANI,S.I.GUNDERSON,I.W.MATTAJ,L.E.KAY,D.NEUHAUS,G.VARANI | |
3TD1 | 3TD1 | AB | 43 | 17 | 2.1 | 12-07-11 | synthetic | CRYSTAL STRUCTURE OF THE BACTERIAL A1408G-MUTANT AND THE PROTOZOA CYTOPLASMIC RIBOSOMAL DECODING SITE IN COMPLEX WITH GENETICIN | J.KONDO | |
1IE1 | 1IE1 | A | 396 | 125 | SOLUTION NMR | 6-20-01 | synthetic | NMR SOLUTION STRUCTURE OF AN IN VITRO SELECTED RNA WHICH IS SEQUENCE SPECIFICALLY RECOGNIZED BY HAMSTER NUCLEOLIN RBD12. | P.BOUVET,F.H-T.ALLAIN,L.D.FINGER,T.DIECKMANN,J.FEIGON | |
2K66 | 2K66 | A | 440 | 200 | SOLUTION NMR | 7-14-09 | synthetic | NMR SOLUTION STRUCTURE OF THE D3'-STEM CLOSED BY A GAAA TETRALOOP OF THE GROUP II INTRON SC.AI5(GAMMA) | D.KRUSCHEL,R.K.O.SIGEL | |
2G1W | 2G1W | A | 330 | 108 | SOLUTION NMR | 4-11-06 | synthetic | NMR STRUCTURE OF THE AQUIFEX AEOLICUS TMRNA PSEUDOKNOT PK1 | S.NONIN-LECOMTE,F.DARDEL | |
3LOA | 3LOA | AB | 42 | 15 | 2.3 | 8-04-10 | synthetic,synthetic | CRYSTAL STRUCTURE ANALYSIS OF THE RNA CONSTRUCT WITH TWO ADJACENT LIGAND BINDING SITES OF HELIX H44 IN 16S RIBOSOMAL RNA | S.DIBROV | |
1K6H | 1K6H | A | 440 | 189 | SOLUTION NMR | 12-19-01 | synthetic | SOLUTION STRUCTURE OF CONSERVED AGNN TETRALOOPS: INSIGHTS INTO RNT1P RNA PROCESSING | I.LEBARS,B.LAMONTAGNE,S.YOSHIZAWA,S.ABOU ELELA,D.FOURMY | |
2W2H | 2W2H | S | 44 | 7 | 3.2 | 12-09-08 | EQUINE INFECTIOUS ANEMIA VIRUS | STRUCTURAL BASIS OF TRANSCRIPTION ACTIVATION BY THE CYCLIN T1-TAT-TAR RNA COMPLEX FROM EIAV | K.ANAND,M.GEYER | |
4A4T | 4A4T | A | 110 | 45 | SOLUTION NMR | 5-30-12 | HALOARCULA MARISMORTUI | UNAC TETRALOOPS: TO WHAT EXTENT CAN THEY MIMIC GNRA TETRALOOPS | Q.ZHAO,H.HUANG,U.NAGASWAMY,Y.XIA,X.GAO,G.FOX | 4A4U 4A4R Compare |
1K2G | 1K2G | A | 22 | 8 | SOLUTION NMR | 5-08-02 | synthetic | STRUCTURAL BASIS FOR THE 3'-TERMINAL GUANOSINE RECOGNITION BY THE GROUP I INTRON | Y.KITAMURA,Y.MUTO,S.WATANABE,I.KIM,T.ITO,Y.NISHIYA, K.SAKAMOTO,T.OHTSUKI,G.KAWAI,K.WATANABE,K.HOSONO,H.TAKAKU, E.KATOH,T.YAMAZAKI,T.INOUE,S.YOKOYAMA | |
1RLG | 1RLG | D | 44 | 18 | 2.7 | 6-01-04 | synthetic | MOLECULAR BASIS OF BOX C/D RNA-PROTEIN INTERACTION: CO- CRYSTAL STRUCTURE OF THE ARCHAEAL SRNP INTIATION COMPLEX | T.MOORE,Y.ZHANG,M.O.FENLEY,H.LI | |
3TS0 | 3TS0 | U | 44 | 10 | 2.8 | 11-16-11 | synthetic | MOUSE LIN28A IN COMPLEX WITH LET-7F-1 MICRORNA PRE-ELEMENT | Y.NAM,P.SLIZ | 3TRZ Compare |
1IE2 | 1IE2 | A | 462 | 156 | SOLUTION NMR | 6-20-01 | synthetic | SOLUTION STRUCTURE OF AN IN VITRO SELECTED RNA WHICH IS SEQUENCE SPECIFICALLY RECOGNIZED BY RBD12 OF HAMSTER NUCLEOLIN.SNRE (ANTI) | P.BOUVET,F.H.-T.ALLAIN,L.D.FINGER,T.DIECKMANN,J.FEIGON | |
1FEU | 1FEU | BC | 80 | 32 | 2.3 | 6-25-01 | synthetic,synthetic | CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN TL5, ONE OF THE CTC FAMILY PROTEINS, COMPLEXED WITH A FRAGMENT OF 5S RRNA. | R.V.FEDOROV,V.A.MESHCHERYAKOV,G.M.GONGADZE,N.P.FOMENKOVA, N.A.NEVSKAYA,M.SELMER,M.LAURBERG,O.KRISTENSEN,S.AL- KARADAGHI,A.LILJAS,M.B.GARBER,S.V.NIKONOV | |
1JP0 | 1JP0 | A | 588 | 196 | SOLUTION NMR | 5-01-02 | synthetic | NMR STRUCTURE OF THE LP5.1 HAIRPIN FROM BACILLUS RNASE P RNA REFINED WITHOUT RESIDUAL DIPOLAR COUPLINGS | T.C.LEEPER,F.J.SCHMIDT,S.R.VAN DOREN | |
2O3X | 2O3X | AB | 42 | 17 | 2.9 | 11-06-07 | synthetic | CRYSTAL STRUCTURE OF THE PROKARYOTIC RIBOSOMAL DECODING SITE COMPLEXED WITH PAROMAMINE DERIVATIVE NB30 | J.KONDO,M.HAINRICHSON,I.NUDELMAN,D.SHALLOM-SHEZIFI,T.BAASOV, E.WESTHOF | 2F4S Compare |
1URN | 1URN | Q | 55 | 13 | 1.9 | 3-08-96 | synthetic | U1A MUTANT/RNA COMPLEX + GLYCEROL | C.OUBRIDGE,N.ITO,P.R.EVANS,C.-H.TEO,K.NAGAI | |
1SZY | 1SZY | A | 21 | 7 | SOLUTION NMR | 4-20-04 | synthetic | SOLUTION STRUCTURE OF ITALY1 ("INITIATOR TRNA ANTICODON LOOP FROM YEAST"), AN UNMODIFIED 21-NT RNA WITH THE SEQUENCE OF THE ANTICODON STEM-LOOP OF YEAST INITIATOR TRNA | D.C.SCHWEISGUTH,P.B.MOORE | |
1QWA | 1QWA | A | 357 | 144 | SOLUTION NMR | 11-25-03 | synthetic | NMR STRUCTURE OF 5'-R(GGAUGCCUCCCGAGUGCAUCC): AN RNA HAIRPIN DERIVED FROM THE MOUSE 5'ETS THAT BINDS NUCLEOLIN RBD12. | L.D.FINGER,L.TRANTIREK,C.JOHANSSON,J.FEIGON | |
1K8W | 1K8W | B | 21 | 8 | 1.9 | 12-31-01 | synthetic | CRYSTAL STRUCTURE OF THE E. COLI PSEUDOURIDINE SYNTHASE TRUB BOUND TO A T STEM-LOOP RNA | C.HOANG,A.R.FERRE-D'AMARE | 1ZL3 1ZE2 2AB4 Compare |
17RA | 17RA | A | 252 | 86 | SOLUTION NMR | 4-20-99 | synthetic | BRANCHPOINT HELIX FROM YEAST AND BINDING SITE FOR PHAGE GA/MS2 COAT PROTEINS, NMR, 12 STRUCTURES | E.P.NIKONOWICZ,J.S.SMITH | |
1O9M | 1O9M | AB | 42 | 17 | 2.4 | 3-27-03 | ESCHERICHIA COLI | THE COMPLEX OF A NOVEL ANTIBIOTIC WITH THE AMINOACYL SITE OF THE BACTERIAL RIBOSOME REVEALED BY X-RAY CRYSTALLOGRAPHY. | R.RUSSELL,J.B.MURRAY | 2F4U 2ET8 Compare |
2ZKO | 2ZKO | CD | 42 | 18 | 1.7 | 10-14-08 | INFLUENZA A VIRUS | STRUCTURAL BASIS FOR DSRNA RECOGNITION BY NS1 PROTEIN OF HUMAN INFLUENZA VIRUS A | Y.A.YUAN | |
2BJ2 | 2BJ2 | AB | 40 | 20 | SOLUTION NMR | 2-02-99 | synthetic,synthetic | RNA LOOP-LOOP COMPLEX: THE COLE1 INVERTED LOOP SEQUENCE, NMR, MINIMIZED AVERAGE STRUCTURE | A.J.LEE,D.M.CROTHERS | 1BJ2 Compare |
2FY1 | 2FY1 | B | 357 | 136 | SOLUTION NMR | 2-06-07 | HOMO SAPIENS | A DUAL MODE OF RNA RECOGNITION BY THE RBMY PROTEIN | L.SKRISOVSKA,C.BOURGOIS,R.STEFL,L.KISTER,P.WENTER,D.ELLIOT, J.STEVENIN,F.H.T.ALLAIN | |
1RPU | 1RPU | CD | 42 | 19 | 2.5 | 1-13-04 | synthetic | CRYSTAL STRUCTURE OF CIRV P19 BOUND TO SIRNA | J.M.VARGASON,G.SZITTYA,J.BURGYAN,T.M.T.HALL | |
1RKJ | 1RKJ | B | 294 | 98 | SOLUTION NMR | 4-27-04 | MESOCRICETUS AURATUS | SOLUTION STRUCTURE OF THE COMPLEX FORMED BY THE TWO N- TERMINAL RNA-BINDING DOMAINS OF NUCLEOLIN AND A PRE-RRNA TARGET | C.JOHANSSON,L.D.FINGER,L.TRANTIREK,T.D.MUELLER,S.KIM, I.A.LAIRD-OFFRINGA,J.FEIGON | |
3BOY | 3BOY | D | 21 | 0 | 1.7 | 1-15-08 | BACILLUS SUBTILIS | CRYSTAL STRUCTURE OF THE HUTP ANTITERMINATION COMPLEX BOUND TO THE HUT MRNA | T.S.KUMAREVEL,D.BALASUNDARESAN,J.JEYAKANTHAN,A.SHINKAI, S.YOKOYAMA,P.K.R.KUMAR,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | |
4B3Q | 4B3Q | R | 21 | 0 | 5.0 | 1-16-13 | synthetic | STRUCTURES OF HIV-1 RT AND RNA-DNA COMPLEX REVEAL A UNIQUE RT CONFORMATION AND SUBSTRATE INTERFACE | M.LAPKOUSKI,L.TIAN,J.T.MILLER,S.F.J.LE GRICE,W.YANG | |
4B3P | 4B3P | R | 21 | 0 | 4.8 | 1-16-13 | SYNTHETIC CONSTRUCT | STRUCTURES OF HIV-1 RT AND RNA-DNA COMPLEX REVEAL A UNIQUE RT CONFORMATION AND SUBSTRATE INTERFACE | M.LAPKOUSKI,L.TIAN,J.T.MILLER,S.F.J.LE GRICE,W.YANG | |
2H2X | 2H2X | A | 420 | 143 | SOLUTION NMR | 10-03-06 | synthetic | SOLUTION STRUCTURE OF THE TETRAHYMENA TELOMERASE RNA STEM IV TERMINAL LOOP | R.J.RICHARDS,H.WU,L.TRANTIREK,C.M.O'CONNOR,K.COLLINS, J.FEIGON | |
1JOX | 1JOX | A | 504 | 167 | SOLUTION NMR | 5-01-02 | synthetic | NMR STRUCTURE OF THE LP5.1 HAIRPIN FROM BACILLUS RNASE P RNA REFINED WITH RESIDUAL DIPOLAR COUPLINGS | T.C.LEEPER,F.J.SCHMIDT,S.R.VAN DOREN | |
1D0U | 1D0U | A | 483 | 184 | SOLUTION NMR | 5-24-00 | synthetic | SOLUTION STRUCTURE OF AN RNA BINDING SITE FOR PHAGE MS2 COAT PROTEIN | J.S.SMITH,E.P.NIKONOWICZ | |
3DH3 | 3DH3 | EF | 84 | 26 | 3.0 | 4-28-09 | synthetic | CRYSTAL STRUCTURE OF RLUF IN COMPLEX WITH A 22 NUCLEOTIDE RNA SUBSTRATE | A.ALIAN,A.DEGIOVANNI,R.M.STROUD,J.S.FINER-MOORE | |
2RPK | 2RPK | A | 20 | 7 | SOLUTION NMR | 12-30-08 | synthetic | SOLUTION STRUCTURE OF DOMAIN II OF THE POSITIVE POLARITY CCHMVD HAMMERHEAD RIBOZYME | J.GALLEGO,D.DUFOUR,M.DE LA PENA,S.GAGO,R.FLORES | |
2TOB | 2TOB | A | 260 | 90 | SOLUTION NMR | 6-22-99 | synthetic | SOLUTION STRUCTURE OF THE TOBRAMYCIN-RNA APTAMER COMPLEX, NMR, 13 STRUCTURES | L.JIANG,D.J.PATEL | |
1BN0 | 1BN0 | A | 220 | 83 | SOLUTION NMR | 4-27-99 | synthetic | SL3 HAIRPIN FROM THE PACKAGING SIGNAL OF HIV-1, NMR, 11 STRUCTURES | L.PAPPALARDO,D.J.KERWOOD,I.PELCZER,P.N.BORER | |
1HLX | 1HLX | A | 400 | 154 | SOLUTION NMR | 9-15-95 | synthetic | P1 HELIX NUCLEIC ACIDS (DNA/RNA) RIBONUCLEIC ACID | F.H.-T.ALLAIN,G.VARANI | |
4IFD | 4IFD | R | 20 | 4 | 2.8 | 2-06-13 | synthetic | CRYSTAL STRUCTURE OF AN 11-SUBUNIT EUKARYOTIC EXOSOME COMPLEX BOUND TO RNA | D.L.MAKINO,E.CONTI | |
1A1T | 1A1T | B | 500 | 198 | SOLUTION NMR | 6-17-98 | synthetic | STRUCTURE OF THE HIV-1 NUCLEOCAPSID PROTEIN BOUND TO THE SL3 PSI-RNA RECOGNITION ELEMENT, NMR, 25 STRUCTURES | R.N.DE GUZMAN,Z.R.WU,C.C.STALLING,L.PAPPALARDO,P.N.BORER, M.F.SUMMERS | |
2O33 | 2O33 | A | 400 | 159 | SOLUTION NMR | 2-06-07 | synthetic | SOLUTION STRUCTURE OF U2 SNRNA STEM I FROM S. CEREVISIAE | D.G.SASHITAL,V.VENDITTI,C.A.ANGERS,G.CORNILESCU,S.E.BUTCHER | |
4E48 | 4E48 | AB | 60 | 15 | 2.5 | 7-11-12 | synthetic | STRUCTURE OF 20MER DOUBLE-HELICAL RNA COMPOSED OF CUG/CUG-REPEATS | E.KATORCHA,L.MALININA | |
1EC6 | 1EC6 | C | 40 | 9 | 2.4 | 2-21-00 | synthetic | CRYSTAL STRUCTURE OF NOVA-2 KH3 K-HOMOLOGY RNA-BINDING DOMAIN BOUND TO 20-MER RNA HAIRPIN | H.A.LEWIS,K.MUSUNURU,K.B.JENSEN,C.EDO,H.CHEN | |
2I82 | 2I82 | E | 79 | 28 | 2.0 | 11-21-06 | synthetic | CRYSTAL STRUCTURE OF PSEUDOURIDINE SYNTHASE RLUA: INDIRECT SEQUENCE READOUT THROUGH PROTEIN-INDUCED RNA STRUCTURE | C.HOANG | |
3NJ6 | 3NJ6 | A | 20 | 8 | 0.9 | 8-25-10 | synthetic | .95 A RESOLUTION X-RAY STRUCTURE OF (GGCAGCAGCC)2 | A.KILISZEK,R.KIERZEK,W.J.KRZYZOSIAK,W.RYPNIEWSKI | |
2RPT | 2RPT | A | 200 | 78 | SOLUTION NMR | 8-25-09 | synthetic | STRUCTURE OF THE CC MISMATCH FROM THE THYMIDYLATE SYNTHASE BINDING SITE 1 HAIRPIN AND ANALYSIS OF ITS INTERACTION WITH PAROMOMYCIN | T.J.TAVARES,P.E.JOHNSON | |
3UZS | 3UZS | C | 20 | 7 | 4.5 | 7-11-12 | synthetic | STRUCTURE OF THE C13.28 RNA APTAMER BOUND TO THE G PROTEIN-COUPLED RECEPTOR KINASE 2-HETEROTRIMERIC G PROTEIN BETA 1 AND GAMMA 2 SUBUNIT COMPLEX | J.J.G.TESMER,V.M.TESMER | |
1U2A | 1U2A | A | 20 | 8 | SOLUTION NMR | 3-04-98 | SACCHAROMYCES CEREVISIAE | STEM LOOP IIA FROM U2SNRNA OF SACCHAROMYCES CEREVISIAE, NMR, MINIMIZED AVERAGE STRUCTURE | S.C.STALLINGS,P.B.MOORE | |
1EGK | 1EGK | A | 40 | 0 | 3.1 | 6-26-00 | synthetic | CRYSTAL STRUCTURE OF A NUCLEIC ACID FOUR-WAY JUNCTION | J.NOWAKOWSKI,P.J.SHIM,C.D.STOUT,G.F.JOYCE | |
3TZR | 3TZR | AB | 36 | 16 | 2.2 | 3-21-12 | HEPATITIS C VIRUS,HEPATITIS C VIRUS | STRUCTURE OF A RIBOSWITCH-LIKE RNA-LIGAND COMPLEX FROM THE HEPATITIS C VIRUS INTERNAL RIBOSOME ENTRY SITE | S.M.DIBROV,K.DING,N.BRUNN,M.A.PARKER,B.M.BERGDAHL,D.L.WYLES,T.HERMANN | |
2U2A | 2U2A | A | 20 | 7 | SOLUTION NMR | 3-04-98 | SACCHAROMYCES CEREVISIAE | STEM LOOP IIA FROM U2 SNRNA OF SACCHAROMYCES CEREVISIAE, NMR, MINIMIZED AVERAGE STRUCTURE | S.C.STALLINGS,P.B.MOORE | |
361D | 361D | AB | 40 | 9 | 3.0 | 7-01-98 | synthetic | CRYSTAL STRUCTURE OF DOMAIN E OF THERMUS FLAVUS 5S RRNA: A HELICAL RNA-STRUCTURE INCLUDING A TETRALOOP | M.PERBANDT,A.NOLTE,S.LORENZ,V.A.ERDMANN,C.BETZEL | |
1MFJ | 1MFJ | A | 200 | 76 | SOLUTION NMR | 11-06-02 | synthetic | ' STEM-LOOP FROM HUMAN U4 SNRNA | L.R.COMOLLI,N.B.ULYANOV,T.L.JAMES,W.H.GMEINER | |
2JPP | 2JPP | D | 400 | 140 | SOLUTION NMR | 8-21-07 | PSEUDOMONAS FLUORESCENS | STRUCTURAL BASIS OF RSMA/CSRA RNA RECOGNITION: STRUCTURE OF RSME BOUND TO THE SHINE-DALGARNO SEQUENCE OF HCNA MRNA | M.SCHUBERT,K.LAPOUGE,O.DUSS,F.C.OBERSTRASS,I.JELESAROV, D.HAAS,F.H.-T.ALLAIN | |
4AY2 | 4AY2 | C | 19 | 8 | 2.8 | 10-03-12 | synthetic | CAPTURING 5' TRI-PHOSPHORYLATED RNA DUPLEX BY RIG-I | D.LUO,A.M.PYLE | |
2Y8W | 2Y8W | B | 19 | 6 | 1.8 | 5-18-11 | synthetic | STRUCTURE OF CRISPR ENDORIBONUCLEASE CSE3 BOUND TO 20 NT RNA | D.G.SASHITAL,M.JINEK,J.A.DOUDNA | |
4E5C | 4E5C | AB | 38 | 19 | 1.7 | 7-11-12 | synthetic | CRYSTAL STRUCTURE OF 19MER DOUBLE-HELICAL RNA CONTAINING CUG/CGG- REPEATS | L.MALININA,A.POPOV,J.TAMJAR | |
1SLO | 1SLO | A | 19 | 7 | SOLUTION NMR | 12-07-96 | CAENORHABDITIS ELEGANS | FIRST STEM LOOP OF THE SL1 RNA FROM CAENORHABDITIS ELEGANS, NMR, MINIMIZED AVERAGE STRUCTURE | N.L.GREENBAUM,I.RADHAKRISHNAN,D.J.PATEL,D.HIRSH | 1SLP Compare |
2QKB | 2QKB | C | 19 | 0 | 2.4 | 11-13-07 | HOMO SAPIENS | HUMAN RNASE H CATALYTIC DOMAIN MUTANT D210N IN COMPLEX WITH 20-MER RNA/DNA HYBRID | M.NOWOTNY,S.A.GAIDAMAKOV,R.GHIRLANDO,S.M.CERRITELLI, R.J.CROUCH,W.YANG | |
3SYW | 3SYW | AB | 38 | 16 | 1.6 | 4-25-12 | synthetic | CRYSTAL STRUCTURE OF THE TRIPLET REPEAT IN MYOTONIC DYSTROPHY REVEALS HETEROGENEOUS 1X1 NUCLEOTIDE UU INTERNAL LOOP CONFORMATIONS | A.KUMAR,H.PARK,F.PENGFEI,R.PARKESH,M.GUO,K.W.NETTLES,M.D.DISNEY | 4J50 Compare |
1QC0 | 1QC0 | CD | 57 | 28 | 1.6 | 11-11-99 | synthetic,synthetic,synthetic,synthetic | CRYSTAL STRUCTURE OF A 19 BASE PAIR COPY CONTROL RELATED RNA DUPLEX | P.S.KLOSTERMAN,S.A.SHAH,T.A.STEITZ | |
1DFU | 1DFU | MN | 38 | 15 | 1.8 | 12-02-99 | synthetic,synthetic | CRYSTAL STRUCTURE OF E.COLI RIBOSOMAL PROTEIN L25 COMPLEXED WITH A 5S RRNA FRAGMENT AT 1.8 A RESOLUTION | M.LU,T.A.STEITZ | |
3SZX | 3SZX | AB | 38 | 14 | 2.2 | 4-25-12 | synthetic | CRYSTAL STRUCTURE OF THE TRIPLET REPEAT IN MYOTONIC DYSTROPHY REVEALS HETEROGENEOUS 1X1 NUCLEOTIDE UU INTERNAL LOOP CONFORMATIONS | A.KUMAR,H.PARK,F.PENGFEI,R.PARKESH,M.GUO,K.W.NETTLES,M.D.DISNEY | |
4A36 | 4A36 | TU | 74 | 33 | 3.7 | 10-19-11 | SYNTHETIC CONSTRUCT,SYNTHETIC CONSTRUCT | STRUCTURE OF DUCK RIG-I HELICASE DOMAIN BOUND TO 19-MER DSRNA AND ATP TRANSITION STATE ANALOGUE | E.KOWALINSKI,T.LUNARDI,A.A.MCCARTHY,S.CUSACK | |
2RLU | 2RLU | A | 190 | 70 | SOLUTION NMR | 2-26-08 | synthetic | THE THREE DIMENSIONAL STRUCTURE OF THE MOORELLA THERMOACETICA SELENOCYSTEINE INSERTION SEQUENCE RNA HAIRPIN AND ITS INTERACTION WITH THE ELONGATION FACTOR SELB | A.V.BERIBISKY,T.J.TAVARES,A.N.AMBORSKI,M.MOTAMED, A.E.JOHNSON,T.L.MARK,P.E.JOHNSON | |
1I3X | 1I3X | A | 285 | 117 | SOLUTION NMR | 4-04-01 | synthetic | SOLUTION STRUCTURE OF THE A LOOP OF 23S RIBOSOMAL RNA | S.C.BLANCHARD,J.D.PUGLISI | |
1ESY | 1ESY | A | 380 | 135 | SOLUTION NMR | 5-31-00 | synthetic | NMR STRUCTURE OF STEM LOOP SL2 OF THE HIV-1 PSI RNA PACKAGING SIGNAL REVEALS A NOVEL A-U-A BASE-TRIPLE PLATFORM | G.K.AMARASINGHE,R.N.DE GUZMAN,R.B.TURNER,M.F.SUMMERS | |
2ZI0 | 2ZI0 | CD | 38 | 18 | 2.8 | 7-22-08 | synthetic | CRYSTAL STRUCTURE OF TAV2B/SIRNA COMPLEX | Y.A.YUAN,H.-Y.CHEN | |
2BQ5 | 2BQ5 | R | 36 | 12 | 2.9 | 3-22-06 | BACTERIOPHAGE MS2 | MS2 (N87AE89K MUTANT) - RNA HAIRPIN COMPLEX | W.T.HORN,K.TARS,E.GRAHN,C.HELGSTRAND,A.J.BARON,H.LAGO, C.J.ADAMS,D.S.PEABODY,S.E.V.PHILLIPS,N.J.STONEHOUSE, L.LILJAS,P.G.STOCKLEY | 1ZDK Compare |
2B7G | 2B7G | A | 190 | 70 | SOLUTION NMR | 1-24-06 | synthetic | STRUCTURE OF THE SMAUG RECOGNITION RNA ELEMENT | P.E.JOHNSON,L.W.DONALDSON | |
1F27 | 1F27 | AB | 30 | 14 | 1.3 | 6-12-00 | synthetic,synthetic | CRYSTAL STRUCTURE OF A BIOTIN-BINDING RNA PSEUDOKNOT | J.NIX,D.SUSSMAN,C.WILSON | |
2XEB | 2XEB | AB | 330 | 132 | SOLUTION NMR | 5-26-10 | HOMO SAPIENS,HOMO SAPIENS | NMR STRUCTURE OF THE PROTEIN-UNBOUND SPLICEOSOMAL U4 SNRNA 5' STEM LOOP | M.FALB,I.AMATA,F.GABEL,B.SIMON,T.CARLOMAGNO | |
1Q2R | 1Q2R | EF | 38 | 13 | 2.9 | 9-09-03 | synthetic | CHEMICAL TRAPPING AND CRYSTAL STRUCTURE OF A CATALYTIC TRNA GUANINE TRANSGLYCOSYLASE COVALENT INTERMEDIATE | W.XIE,X.LIU,R.H.HUANG | 1Q2S Compare |
1UUU | 1UUU | A | 285 | 93 | SOLUTION NMR | 2-25-98 | synthetic | STRUCTURE OF AN RNA HAIRPIN LOOP WITH A 5'-CGUUUCG-3' LOOP MOTIF BY HETERONUCLEAR NMR SPECTROSCOPY AND DISTANCE GEOMETRY, 15 STRUCTURES | C.SICH,O.OHLENSCHLAGER,R.RAMACHANDRAN,M.GORLACH,L.R.BROWN | |
1R9F | 1R9F | BC | 38 | 19 | 1.9 | 1-27-04 | synthetic,synthetic | CRYSTAL STRUCTURE OF P19 COMPLEXED WITH 19-BP SMALL INTERFERING RNA | K.YE,L.MALININA,D.J.PATEL | |
1ATO | 1ATO | A | 190 | 60 | SOLUTION NMR | 11-12-97 | HEPATITIS DELTA VIRUS | THE STRUCTURE OF THE ISOLATED, CENTRAL HAIRPIN OF THE HDV ANTIGENOMIC RIBOZYME, NMR, 10 STRUCTURES | M.H.KOLK,H.A.HEUS,C.W.HILBERS | |
3SJ2 | 3SJ2 | AB | 36 | 17 | 1.4 | 8-03-11 | synthetic,synthetic | A CRYSTAL STRUCTURE OF A MODEL OF THE REPEATING R(CGG) TRANSCRIPT FOUND IN FRAGILE X SYNDROME | A.KUMAR,F.PENGFEI,H.PARK,K.NETTLES,M.GUO,M.D.DISNEY | |
3CZ3 | 3CZ3 | GH | 76 | 36 | 3.2 | 5-05-09 | synthetic,TOMATO ASPERMY VIRUS | CRYSTAL STRUCTURE OF TOMATO ASPERMY VIRUS 2B IN COMPLEX WITH SIRNA | J.B.MA,F.LI,S.W.DING,D.J.PATEL | |
1T0E | 1T0E | AC | 35 | 15 | 1.7 | 6-15-04 | synthetic,synthetic | CRYSTAL STRUCTURE OF 2-AMINOPURINE LABELLED BACTERIAL DECODING SITE RNA | S.SHANDRICK,Q.ZHAO,Q.HAN,B.K.AYIDA,M.TAKAHASHI,G.C.WINTERS, K.B.SIMONSEN,D.VOURLOUMIS,T.HERMANN | |
3OL9 | 3OL9 | JKLNOP | 140 | 62 | 2.2 | 12-22-10 | synthetic,synthetic,synthetic | POLIOVIRUS POLYMERASE ELONGATION COMPLEX WITH 3'-DEOXY-CTP | P.GONG,O.B.PEERSEN | 3OLA 3OLB 3OL6 Compare |
3BT7 | 3BT7 | D | 36 | 11 | 2.4 | 4-29-08 | synthetic | STRUCTURE OF E. COLI 5-METHYLURIDINE METHYLTRANSFERASE TRMA IN COMPLEX WITH 19 NUCLEOTIDE T-ARM ANALOGUE | A.ALIAN,R.M.STROUD,J.FINER-MOORE | |
1NZ1 | 1NZ1 | A | 391 | 153 | SOLUTION NMR | 5-13-03 | synthetic | SOLUTION STRUCTURE OF THE S. CEREVISIAE U6 INTRAMOLECULAR STEM-LOOP CONTAINING AN SP PHOSPHOROTHIOATE AT NUCLEOTIDE U80 | N.J.REITER,L.J.NIKSTAD,A.M.ALLMAN,R.J.JOHNSON,S.E.BUTCHER | |
4GHL | 4GHL | EF | 36 | 18 | 2.0 | 11-28-12 | synthetic | STRUCTURAL BASIS FOR MARBURG VIRUS VP35 MEDIATE IMMUNE EVASION MECHANISMS | P.RAMANAN,D.M.BOREK,Z.OTWINOWSKI,D.W.LEUNG,G.K.AMARASINGHE | |
3KS8 | 3KS8 | EF | 36 | 18 | 2.4 | 1-12-10 | synthetic,synthetic | CRYSTAL STRUCTURE OF RESTON EBOLAVIRUS VP35 RNA BINDING DOMAIN IN COMPLEX WITH 18BP DSRNA | C.R.KIMBERLIN,Z.A.BORNHOLDT,S.LI,V.L.WOODS,I.J.MACRAE, E.O.SAPHIRE | |
2QH4 | 2QH4 | A | 360 | 121 | SOLUTION NMR | 9-25-07 | synthetic | SOLUTION STRUCTURE OF THE U85 C/D-H/ACA SCARNA 5' TERMINAL HAIRPIN LOOP | J.FEIGON,C.A.THEIMER,N.CHIM,K.E.BREECE | |
5MSF | 5MSF | R | 34 | 11 | 2.8 | 11-11-98 | ENTEROBACTERIO PHAGE MS2 | MS2 PROTEIN CAPSID/RNA COMPLEX | S.ROWSELL,N.J.STONEHOUSE,M.A.CONVERY,C.J.ADAMS, A.D.ELLINGTON,I.HIRAO,D.S.PEABODY,P.G.STOCKLEY, S.E.V.PHILLIPS | |
1SI3 | 1SI3 | B | 18 | 6 | 2.6 | 5-25-04 | synthetic | CRYSTAL STRUCTURE OF THE PAZ DOMAIN OF HUMAN EIF2C1 IN COMPLEX WITH A 9-MER SIRNA-LIKE DUPLEX | K.YE,J.B.MA,D.PATEL | |
1F6U | 1F6U | B | 360 | 109 | SOLUTION NMR | 10-09-00 | HUMAN IMMUNODEFICIENCY VIRUS 1 | NMR STRUCTURE OF THE HIV-1 NUCLEOCAPSID PROTEIN BOUND TO STEM-LOOP SL2 OF THE PSI-RNA PACKAGING SIGNAL. IMPLICATIONS FOR GENOME RECOGNITION | G.K.AMARASINGHE,R.N.DE GUZMAN,R.B.TURNER,K.J.CHANCELLOR, M.F.SUMMERS | |
1F5U | 1F5U | AB | 36 | 16 | SOLUTION NMR | 8-21-00 | synthetic | SOLUTION STRUCTURE OF THE KISSING DIMER OF H3 GACG STEM- LOOP IN THE 5'-END DIMERIZATION SIGNAL OF MOLONEY MURINE LEUKEMIA VIRUS GENOMIC RNA | C.-H.KIM,I.TINOCO JR. | |
2QK9 | 2QK9 | B | 18 | 0 | 2.5 | 11-13-07 | HOMO SAPIENS | HUMAN RNASE H CATALYTIC DOMAIN MUTANT D210N IN COMPLEX WITH 18-MER RNA/DNA HYBRID | M.NOWOTNY,S.A.GAIDAMAKOV,R.GHIRLANDO,S.M.CERRITELLI, R.J.CROUCH,W.YANG | |
2Y8Y | 2Y8Y | B | 18 | 5 | 1.4 | 5-18-11 | synthetic | STRUCTURE B OF CRISPR ENDORIBONUCLEASE CSE3 BOUND TO 19 NT RNA | D.G.SASHITAL,M.JINEK,J.A.DOUDNA | |
1ZEV | 1ZEV | AB | 36 | 13 | 1.6 | 10-25-05 | synthetic | CRYSTAL STRUCTURE OF A PATHOGENIC RNA: CUG REPEATS | B.H.MOOERS,J.S.LOGUE,J.A.BERGLUND | 3GM7 Compare |
2GVO | 2GVO | A | 378 | 113 | SOLUTION NMR | 5-08-07 | synthetic | SOLUTION STRUCTURE OF A PURINE RICH HEXALOOP HAIRPIN BELONGING TO PGY/MDR1 MRNA AND TARGETED BY ANTISENSE OLIGONUCLEOTIDES | F.JOLI,N.BOUCHEMAL,A.LAIGLE,B.HARTMANN,E.HANTZ | |
2D2L | 2D2L | ABCD | 59 | 27 | 2.5 | 11-01-05 | synthetic,synthetic,synthetic,synthetic | CRYSTAL STRUCTURE OF A MINIMAL, ALL-RNA HAIRPIN RIBOZYME WITH A PROPYL LINKER (C3) AT POSITION U39 | S.ALAM,V.GRUM-TOKARS,J.KRUCINSKA,M.L.KUNDRACIK,J.E.WEDEKIND | |
1AJF | 1AJF | A | 18 | 8 | SOLUTION NMR | 7-07-97 | synthetic | SOLUTION STRUCTURE OF THE P5B STEM LOOP FROM A GROUP I INTRON COMPLEXED WITH COBALT (III) HEXAMMINE, NMR, MINIMIZED AVERAGE STRUCTURE | J.S.KIEFT,I.TINOCO JUNIOR | |
1Z30 | 1Z30 | A | 270 | 105 | SOLUTION NMR | 4-26-05 | synthetic | NMR STRUCTURE OF THE APICAL PART OF STEMLOOP D FROM CLOVERLEAF 1 OF BOVINE ENTEROVIRUS 1 RNA | Y.IHLE,O.OHLENSCHLAGER,E.DUCHARDT,R.RAMACHANDRAN,M.GORLACH | |
4IG8 | 4IG8 | BC | 36 | 18 | 2.7 | 1-16-13 | synthetic,synthetic | STRUCTURAL BASIS FOR CYTOSOLIC DOUBLE-STRANDED RNA SURVEILLANCE BY HUMAN OAS1 | J.DONOVAN,A.KORENNYKH | |
2GJW | 2GJW | EFH | 71 | 32 | 2.9 | 9-12-06 | synthetic,synthetic,synthetic | RNA RECOGNITION AND CLEAVAGE BY AN SPLICING ENDONUCLEASE | S.XUE,K.CALVIN,H.LI | |
2OE5 | 2OE5 | AB | 33 | 14 | 1.5 | 2-13-07 | synthetic,synthetic | .5 A X-RAY CRYSTAL STRUCTURE OF APRAMYCIN COMPLEX WITH RNA FRAGMENT GGCGUCGCUAGUACCG/GGUACUAAAAGUCGCCC CONTAINING THE HUMAN RIBOSOMAL DECODING A SITE: RNA CONSTRUCT WITH 3'- OVERHANG | T.HERMANN,V.TERESHKO,E.SKRIPKIN,D.J.PATEL | 2OE8 2OE6 Compare |
2JR4 | 2JR4 | A | 187 | 59 | SOLUTION NMR | 7-24-07 | synthetic | NMR SOLUTION STRUCTURE OF THE ANTICODON OF E.COLI TRNA-VAL3 WITH NO MODIFICATIONS | F.A.P.VENDEIX,A.DZIERGOWSKA,E.M.GUSTILO,W.D.GRAHAM,B.SPROAT, A.MALKIEWICZ,P.F.AGRIS | |
3QRR | 3QRR | B | 17 | 0 | 3.1 | 5-25-11 | synthetic | STRUCTURE OF THERMUS THERMOPHILUS CSE3 BOUND TO AN RNA REPRESENTING A PRODUCT COMPLEX | M.J.SCHELLENBERG,E.G.GESNER,GARSIDE E.L.,A.M.MACMILLAN | |
4FY3 | 4FY3 | 2 | 204 | 48 | 2.9 | 11-21-12 | PANICUM MOSAIC VIRUS | THE CRYSTALLOGRAPHIC STRUCTURE OF PANICUM MOSAIC VIRUS | D.L.MAKINO,S.B.LARSON,A.MCPHERSON | 4FY7 4FY5 4FY2 4FY6 4FY9 4FYA 4FY1 4FY8 4FY4 Compare |
2D18 | 2D18 | AB | 374 | 153 | SOLUTION NMR | 11-01-05 | synthetic | SOLUTION RNA STRUCTURE OF LOOP REGION OF THE HIV-1 DIMERIZATION INITIATION SITE IN THE EXTENDED-DUPLEX DIMER | S.BABA,K.TAKAHASHI,S.NOGUCHI,H.TAKAKU,Y.KOYANAGI,N.YAMAMOTO, G.KAWAI | |
2LBK | 2LBK | A | 136 | 47 | SOLUTION NMR | 4-04-12 | synthetic | GLYCYL-TRNA(UCC)1B ANTICODON STEM-LOOP FROM STAPHYLOCOCCUS EPIDERMIDIS | A.T.CHANG,E.P.NIKONOWICZ | |
2KPD | 2KPD | A | 170 | 42 | SOLUTION NMR | 6-30-10 | synthetic | STRUCTURE DETERMINATION OF THE TOP-LOOP OF THE CONSERVED 3 TERMINAL SECONDARY STRUCTURE IN THE GENOME OF YFV-MUTANT | E.LESCRINIER,N.DYUBANKOVA,K.NAUWELAERTS,R.JONES,P.HERDEWIJN | |
2KRP | 2KRP | A | 17 | 6 | SOLUTION NMR | 12-01-10 | synthetic | SOLUTION STRUCTURE OF THE E. COLI TRNA-ARG2(ACG) ANTICODON STEM AND LOOP | Y.BILBILLE,P.F.AGRIS | |
2LBJ | 2LBJ | A | 136 | 44 | SOLUTION NMR | 4-04-12 | synthetic | GLYCYL-TRNA(GCC) ANTICODON STEM-LOOP FROM BACILLUS SUBTILIS | A.T.CHANG,E.P.NIKONOWICZ | |
2KPC | 2KPC | A | 170 | 56 | SOLUTION NMR | 6-30-10 | synthetic | STRUCTURE DETERMINATION OF THE TOP-LOOP OF THE CONSERVED 3 TERMINAL SECONDARY STRUCTURE IN THE GENOME OF YFV | E.LESCRINIER,N.DYUBANKOVA,K.NAUWELAERTS,R.JONES,P.HERDEWIJN | |
1YN2 | 1YN2 | A | 187 | 66 | SOLUTION NMR | 1-24-06 | synthetic | SOLUTION STRUCTURE OF THE NEUROSPORA VS RIBOZYME STEM-LOOP V IN THE PRESENCE OF MGCL2 WITH MODELING OF BOUND MANGANESE IONS | D.O.CAMPBELL,P.LEGAULT | 1YN1 1TBK Compare |
2KVN | 2KVN | A | 510 | 152 | SOLUTION NMR | 7-07-10 | synthetic | PHI29 E-LOOP HAIRPIN | S.M.HARRIS,S.J.SCHROEDER | |
1WKS | 1WKS | A | 357 | 144 | SOLUTION NMR | 6-22-04 | synthetic | SOLUTION STRUCTURE OF AN RNA STEM-LOOP DERIVED FROM THE 3' CONSERVED REGION OF EEL LINE UNAL2 | S.BABA,M.KAJIKAWA,N.OKADA,G.KAWAI | |
2JLT | 2JLT | AB | 32 | 15 | 2.9 | 8-18-09 | ESCHERICHIA COLI,ESCHERICHIA COLI | CRYSTAL STRUCTURE OF AN RNA KISSING COMPLEX | C.DIPRIMO,S.FRIBOURG | |
1R3E | 1R3E | DE | 50 | 20 | 2.1 | 11-04-03 | synthetic,synthetic | CRYSTAL STRUCTURE OF TRNA PSEUDOURIDINE SYNTHASE TRUB AND ITS RNA COMPLEX: RNA-PROTEIN RECOGNITION THROUGH A COMBINATION OF RIGID DOCKING AND INDUCED FIT | H.PAN,S.AGARWALLA,D.T.MOUSTAKAS,J.FINER-MOORE,R.M.STROUD | |
1JBS | 1JBS | D | 34 | 12 | 2.0 | 10-26-01 | synthetic | CRYSTAL STRUCTURE OF RIBOTOXIN RESTRICTOCIN AND A 29-MER SRD RNA ANALOG | X.YANG,T.GERCZEI,L.GLOVER,C.C.CORRELL | |
1BZ3 | 1BZ3 | A | 17 | 5 | SOLUTION NMR | 4-27-99 | synthetic | STABILIZATION OF THE ANTICODON STEM-LOOP OF TRNALYS,3 BY AN A+C BASE PAIR AND BY PSEUDOURIDINE, NMR, 1 STRUCTURE | P.C.DURANT,D.R.DAVIS | |
1E7K | 1E7K | D | 34 | 14 | 2.9 | 2-19-01 | HOMO SAPIENS | CRYSTAL STRUCTURE OF THE SPLICEOSOMAL 15.5KD PROTEIN BOUND TO A U4 SNRNA FRAGMENT | I.VIDOVIC,S.NOTTROTT,K.HARTHMUTH,R.LUHRMANN,R.FICNER | |
3OL7 | 3OL7 | BCDFGH | 140 | 62 | 2.7 | 12-22-10 | synthetic,synthetic,synthetic | POLIOVIRUS POLYMERASE ELONGATION COMPLEX WITH CTP | P.GONG,O.B.PEERSEN | |
1KKA | 1KKA | A | 136 | 47 | SOLUTION NMR | 7-17-02 | synthetic | SOLUTION STRUCTURE OF THE UNMODIFIED ANTICODON STEM-LOOP FROM E. COLI TRNA(PHE) | J.CABELLO-VILLEGAS,M.E.WINKLER,E.P.NIKONOWICZ | |
1BZ2 | 1BZ2 | A | 17 | 6 | SOLUTION NMR | 4-27-99 | synthetic | STABILIZATION OF THE ANTICODON STEM-LOOP OF TRNALYS,3 BY AN A+C BASE PAIR AND BY PSEUDOURIDINE, NMR, 1 STRUCTURE | P.C.DURANT,D.R.DAVIS | |
2Y9H | 2Y9H | B | 17 | 6 | 2.5 | 5-18-11 | synthetic | STRUCTURE A OF CRISPR ENDORIBONUCLEASE CSE3 BOUND TO 19 NT RNA | D.G.SASHITAL,M.JINEK,J.A.DOUDNA | |
2LBL | 2LBL | A | 136 | 43 | SOLUTION NMR | 4-04-12 | synthetic | UNMODIFIED GLYCYL-TRNA(UCC) ANTICODON STEM-LOOP FROM BACILLUS SUBTILIS | A.T.CHANG,E.P.NIKONOWICZ | |
2LAC | 2LAC | A | 153 | 45 | SOLUTION NMR | 8-03-11 | BACILLUS SUBTILIS | NMR STRUCTURE OF UNMODIFIED_ASL_TYR | A.P.DENMON,J.WANG,E.P.NIKONOWICZ | |
1J4Y | 1J4Y | A | 17 | 6 | SOLUTION NMR | 7-17-02 | synthetic | SOLUTION STRUCTURE OF THE UNMODIFIED ANTICODON STEM-LOOP FROM E. COLI TRNA(PHE) | J.CABELLO-VILLEGAS,M.E.WINKLER,E.P.NIKONOWICZ | |
2D19 | 2D19 | AB | 374 | 164 | SOLUTION NMR | 11-01-05 | synthetic | SOLUTION RNA STRUCTURE OF LOOP REGION OF THE HIV-1 DIMERIZATION INITIATION SITE IN THE KISSING-LOOP DIMER | S.BABA,K.TAKAHASHI,S.NOGUCHI,H.TAKAKU,Y.KOYANAGI,N.YAMAMOTO, G.KAWAI | |
1ATV | 1ATV | A | 68 | 0 | SOLUTION NMR | 2-25-98 | synthetic | HAIRPIN WITH AGAA TETRALOOP, NMR, 4 STRUCTURES | H.KANG | |
2BU1 | 2BU1 | R | 32 | 12 | 2.2 | 8-18-05 | BACTERIOPHAGE MS2 | MS2-RNA HAIRPIN (5BRU-5) COMPLEX | E.GRAHN,T.MOSS,C.HELGSTRAND,K.FRIDBORG,M.SUNDARAM,K.TARS, H.LAGO,N.J.STONEHOUSE,D.R.DAVIS,P.G.STOCKLEY,L.LILJAS | 2C4Q 2C4Y 1ZDI 2IZ8 2B2E 1AQ4 2B2G 1AQ3 Compare |
2L6I | 2L6I | A | 432 | 162 | SOLUTION NMR | 3-23-11 | synthetic | SOLUTION STRUCTURE OF CORONAVIRAL STEM-LOOP 2 (SL2) | C.LEE,L.LI,D.P.GIEDROC | |
2O5I | 2O5I | H | 32 | 0 | 2.5 | 7-03-07 | synthetic | CRYSTAL STRUCTURE OF THE T. THERMOPHILUS RNA POLYMERASE ELONGATION COMPLEX | D.G.VASSYLYEV,T.H.TAHIROV,M.N.VASSYLYEVA | 2O5J 2PPB Compare |
1JTW | 1JTW | A | 224 | 65 | SOLUTION NMR | 12-12-01 | synthetic | STRUCTURE OF SL4 RNA FROM THE HIV-1 PACKAGING SIGNAL | D.J.KERWOOD,M.J.CAVALUZZI,P.N.BORER | |
2D17 | 2D17 | AB | 330 | 141 | SOLUTION NMR | 11-01-05 | synthetic,synthetic | SOLUTION RNA STRUCTURE OF STEM-BULGE-STEM REGION OF THE HIV- 1 DIMERIZATION INITIATION SITE | S.BABA,K.TAKAHASHI,S.NOGUCHI,H.TAKAKU,Y.KOYANAGI,N.YAMAMOTO, G.KAWAI | |
3L26 | 3L26 | C | 16 | 8 | 2.4 | 1-26-10 | synthetic | CRYSTAL STRUCTURE OF ZAIRE EBOLA VP35 INTERFERON INHIBITORY DOMAIN BOUND TO 8 BP DSRNA | D.W.LEUNG,K.C.PRINS,D.M.BOREK,M.FARAHBAKHSH,J.M.TUFARIELLO, P.RAMANAN,J.C.NIX,L.A.HELGESON,Z.OTWINOWSKI,R.B.HONZATKO, C.F.BASLER,G.K.AMARASINGHE | |
4GG4 | 4GG4 | H | 16 | 0 | 2.5 | 10-03-12 | synthetic | CRYSTAL STRUCTURE OF THE TAL EFFECTOR DHAX3 BOUND TO SPECIFIC DNA-RNA HYBRID | P.YIN,D.DENG,C.Y.YAN,X.J.PAN,N.YAN,Y.G.SHI | |
406D | 406D | AE | 32 | 15 | 1.8 | 2-05-99 | engineered | '-R(*CP*AP*CP*CP*GP*GP*AP*UP*GP*GP*UP*(BRO) UP*CP*GP*GP*UP*G)-3' | S.A.SHAH,A.T.BRUNGER | |
1RXA | 1RXA | A | 16 | 8 | 2.9 | 10-20-96 | synthetic | CRYSTAL STRUCTURE OF R(CCCCGGGG) IN TWO DISTINCT LATTICES | S.PORTMANN,N.USMAN,M.EGLI | |
405D | 405D | AB | 32 | 16 | 2.5 | 1-13-99 | synthetic | STRUCTURE OF A 16-MER RNA DUPLEX R(GCAGACUUAAAUCUGC)2 WITH WOBBLE LIKE A.C MISMATCHES | M.SUNDARALINGAM B.PAN,S.N.MITRA | |
4AL5 | 4AL5 | B | 16 | 6 | 2.0 | 6-13-12 | PSEUDOMONAS AERUGINOSA | CRYSTAL STRUCTURE OF THE CSY4-CRRNA PRODUCT COMPLEX | R.E.HAURWITZ,S.H.STERNBERG,J.A.DOUDNA | |
1JWC | 1JWC | A | 16 | 6 | SOLUTION NMR | 3-20-02 | synthetic | NMR SOLUTION STRUCTURE OF THE RNA HAIRPIN BINDING SITE FOR THE HISTONE STEM-LOOP BINDING PROTEIN | E.S.DEJONG,W.F.MARZLUFF,E.P.NIKONOWICZ | 1JU7 Compare |
4HKQ | 4HKQ | E | 16 | 0 | 3.0 | 2-20-13 | synthetic | PROTEIN DNA COMPLEX | E.NOWAK,W.POTRZEBOWSKI,P.V.KONAREV,J.W.RAUSCH,M.K.BONA,D.I.SVERGUN, J.M.BUJNICKI,S.F.J.LE GRICE,M.NOWOTNY | |
1BZU | 1BZU | A | 16 | 4 | SOLUTION NMR | 4-27-99 | synthetic | STABILIZATION OF THE ANTICODON STEM-LOOP OF TRNALYS, 3 BY AN A+C BASE PAIR AND BY PSEUDOURIDINE, NMR, 1 STRUCTURE | P.C.DURANT,D.R.DAVIS | |
3ND3 | 3ND3 | A | 16 | 0 | 1.4 | 9-21-11 | synthetic | UHELIX 16-MER DSRNA | B.H.MOOERS,A.SINGH | 3ND4 Compare |
2KRQ | 2KRQ | A | 16 | 6 | SOLUTION NMR | 12-01-10 | synthetic | SOLUTION STRUCTURE OF THE TRNA-ARG2 (ICG) ASL. | Y.BILBILLE,P.F.AGRIS | |
2LP9 | 2LP9 | A | 160 | 60 | SOLUTION NMR | 5-16-12 | synthetic | PSEUDO-TRILOOP FROM THE SUB-GENOMIC PROMOTER OF BROME MOSAIC VIRUS | J.SKOV | |
2KYD | 2KYD | AB | 640 | 320 | SOLUTION NMR | 7-07-10 | synthetic | RDC AND RCSA REFINEMENT OF AN A-FORM RNA: IMPROVEMENTS IN MAJOR GROOVE WIDTH | B.S.TOLBERT,M.F.SUMMERS,Y.MIYAZAKI,S.BARTON,B.KINDE,P.STARK,R.SINGH, A.BAX,D.CASE | |
2KRZ | 2KRZ | A | 160 | 39 | SOLUTION NMR | 8-18-10 | synthetic | SOLUTION STRUCTURE OF THE HUMAN MITOCHONDRIAL TRNAMET | Y.BILBILLE,P.F.AGRIS | |
1N53 | 1N53 | AB | 25 | 8 | SOLUTION NMR | 4-29-03 | synthetic,synthetic | SOLUTION STRUCTURE OF B. SUBTILIS T BOX ANTITERMINATOR RNA | M.S.GERDEMAN,T.M.HENKIN,J.V.HINES | |
1BZT | 1BZT | A | 16 | 4 | SOLUTION NMR | 4-27-99 | synthetic | STABILIZATION OF THE ANTICODON STEM-LOOP OF TRNALYS,3 BY AN A+C BASE PAIR AND BY PSEUDOURIDINE, NMR, 1 STRUCTURE | P.C.DURANT,D.R.DAVIS | |
1LU3 | 1LU3 | A | 16 | 3 | 16.8 | 6-26-02 | SACCHAROMYCES CEREVISIAE | SEPARATE FITTING OF THE ANTICODON LOOP REGION OF TRNA (NUCLEOTIDE 26-42) IN THE LOW RESOLUTION CRYO-EM MAP OF AN EF-TU TERNARY COMPLEX (GDP AND KIRROMYCIN) BOUND TO E. COLI 70S RIBOSOME | M.VALLE,J.SENGUPTA,N.K.SWAMI,R.A.GRASSUCCI,N.BURKHARDT, K.H.NIERHAUS,R.K.AGRAWAL,J.FRANK | |
2RN1 | 2RN1 | AB | 544 | 284 | SOLUTION NMR | 9-23-08 | synthetic,synthetic | LIQUID CRYSTAL SOLUTION STRUCTURE OF THE KISSING COMPLEX FORMED BY THE APICAL LOOP OF THE HIV TAR RNA AND A HIGH AFFINITY RNA APTAMER OPTIMIZED BY SELEX | H.VAN MELCKEBEKE,M.DEVANY,C.DI PRIMO,F.BEAURAIN,J.TOULME, D.L.BRYCE,J.BOISBOUVIER | |
1U1Y | 1U1Y | R | 31 | 11 | 2.9 | 12-07-04 | ENTEROBACTERIO PHAGE MS2 | CRYSTAL STRUCTURE OF A COMPLEX BETWEEN WT BACTERIOPHAGE MS2 COAT PROTEIN AND AN F5 APTAMER RNA STEMLOOP WITH 2AMINOPURINE SUBSTITUTED AT THE-10 POSITION | W.T.HORN,M.A.CONVERY,N.J.STONEHOUSE,C.J.ADAMS,L.LILJAS, S.E.PHILLIPS,P.G.STOCKLEY | |
420D | 420D | AB | 32 | 16 | 1.9 | 1-13-99 | synthetic | CRYSTAL STRUCTURE OF A 16-MER RNA DUPLEX WITH NON-ADJACENT A(ANTI).G(SYN) MISMATCHES | B.PAN,S.N.MITRA,M.SUNDARALINGAM | |
1KIS | 1KIS | AB | 32 | 13 | SOLUTION NMR | 10-15-97 | synthetic,synthetic | TAR-TAR "KISSING" HAIRPIN COMPLEX DERIVED FROM THE HIV GENOME, NMR, 1 STRUCTURE | K.Y.CHANG,I.TINOCO JUNIOR | |
2PN9 | 2PN9 | AB | 300 | 126 | SOLUTION NMR | 10-30-07 | synthetic,synthetic | NMR STRUCTURE OF A KISSING COMPLEX FORMED BETWEEN THE TAR RNA ELEMENT OF HIV-1 AND A LNA MODIFIED APTAMER | I.LEBARS,T.RICHARD,C.DI PRIMO,J.-J.TOULME | 2OOM Compare |
1T0D | 1T0D | AB | 64 | 28 | 2.2 | 6-15-04 | synthetic,synthetic | CRYSTAL STRUCTURE OF 2-AMINOPURINE LABELLED BACTERIAL DECODING SITE RNA | S.SHANDRICK,Q.ZHAO,Q.HAN,B.K.AYIDA,M.TAKAHASHI,G.C.WINTERS, K.B.SIMONSEN,D.VOURLOUMIS,T.HERMANN | |
1XWU | 1XWU | A | 16 | 5 | SOLUTION NMR | 2-15-05 | synthetic | SOLUTION STRUCTURE OF ACAUAGA LOOP | T.SAKAMOTO,A.OGURO,G.KAWAI,T.OHTSU,Y.NAKAMURA | |
1ZBH | 1ZBH | F | 32 | 10 | 3.0 | 9-26-06 | synthetic | '-END SPECIFIC RECOGNITION OF HISTONE MRNA STEM-LOOP BY 3'- EXONUCLEASE | Y.CHENG,D.J.PATEL | |
3OL8 | 3OL8 | JKLNOP | 138 | 60 | 2.8 | 12-22-10 | synthetic,synthetic,synthetic | POLIOVIRUS POLYMERASE ELONGATION COMPLEX WITH CTP-MN | P.GONG,O.B.PEERSEN | |
4FTB | 4FTB | R | 15 | 0 | 2.7 | 8-01-12 | FLOCK HOUSE VIRUS | CRYSTAL STRUCTURE OF THE AUTHENTIC FLOCK HOUSE VIRUS PARTICLE | J.A.SPEIR,Z.CHEN,V.S.REDDY,J.E.JOHNSON | |
3AGV | 3AGV | SU | 25 | 2 | 2.1 | 11-10-10 | synthetic | CRYSTAL STRUCTURE OF A HUMAN IGG-APTAMER COMPLEX | Y.NOMURA,S.SUGIYAMA,T.SAKAMOTO,S.MIYAKAWA,H.ADACHI,K.TAKANO, S.MURAKAMI,T.INOUE,Y.MORI,Y.NAKAMURA,H.MATSUMURA | |
3PO2 | 3PO2 | P | 15 | 0 | 3.3 | 3-02-11 | synthetic | ARRESTED RNA POLYMERASE II ELONGATION COMPLEX | A.C.M.CHEUNG,P.CRAMER | |
1ZX7 | 1ZX7 | ABGH | 116 | 49 | 2.1 | 9-20-05 | synthetic,synthetic | MOLECULAR RECOGNITION OF RNA BY NEOMYCIN AND A RESTRICTED NEOMYCIN DERIVATIVE | Q.ZHAO,F.ZHAO,K.F.BLOUNT,Q.HAN,Y.TOR,T.HERMANN | 2A04 1ZZ5 Compare |
1YZD | 1YZD | AB | 30 | 14 | 2.4 | 10-18-05 | synthetic | CRYSTAL STRUCTURE OF AN RNA DUPLEX CONTAINING A SITE SPECIFIC 2'-AMINE SUBSTITUTION AT A C-G WATSON-CRICK BASE PAIR | C.M.GHERGHE,J.M.KRAHN,K.M.WEEKS | 1Z79 1YY0 2H1M Compare |
1T0K | 1T0K | CD | 27 | 11 | 3.2 | 7-20-04 | synthetic,synthetic | JOINT X-RAY AND NMR REFINEMENT OF YEAST L30E-MRNA COMPLEX | J.A.CHAO,J.R.WILLIAMSON | |
1ATW | 1ATW | A | 45 | 0 | SOLUTION NMR | 2-25-98 | synthetic | HAIRPIN WITH AGAU TETRALOOP, NMR, 3 STRUCTURES | H.KANG | |
2L9E | 2L9E | A | 15 | 5 | SOLUTION NMR | 3-02-11 | synthetic | SOLUTION STRUCTURE OF THE HUMAN ANTI-CODON STEM AND LOOP(HASL) OF TRANSFER RNA LYSINE 3 (TRNALYS3) | F.A.P.VENDEIX,F.V.MURPHY IV,W.CANTARA,G.LESZCZYNSKA,E.M.GUSTILO, B.SPROAT,A.A.P.MALKIEWICZ,P.F.AGRIS | |
3HK2 | 3HK2 | D | 30 | 0 | 2.8 | 10-06-09 | synthetic | CRYSTAL STRUCTURE OF T. THERMOPHILUS ARGONAUTE N478 MUTANT PROTEIN COMPLEXED WITH DNA GUIDE STRAND AND 19-NT RNA TARGET STRAND | Y.WANG,H.LI,G.SHENG,D.J.PATEL | |
2LPA | 2LPA | A | 150 | 60 | SOLUTION NMR | 5-16-12 | synthetic | MUTANT OF THE SUB-GENOMIC PROMOTER FROM BROME MOSAIC VIRUS | J.SKOV | |
3DD2 | 3DD2 | B | 15 | 3 | 1.9 | 11-11-08 | synthetic | CRYSTAL STRUCTURE OF AN RNA APTAMER BOUND TO HUMAN THROMBIN | S.B.LONG,B.A.SULLENGER | |
2IZN | 2IZN | R | 26 | 8 | 2.6 | 7-27-06 | ENTEROBACTERIO PHAGE MS2 | MS2-RNA HAIRPIN (G-10) COMPLEX | C.HELGSTRAND,E.GRAHN,T.MOSS,N.J.STONEHOUSE,K.TARS, P.G.STOCKLEY,L.LILJAS | |
2AZ2 | 2AZ2 | CD | 30 | 12 | 2.6 | 10-11-05 | synthetic | FLOCK HOUSE VIRUS B2-DSRNA COMPLEX (P4122) | J.A.CHAO,J.H.LEE,B.R.CHAPADOS,E.W.DEBLER,A.SCHNEEMANN, J.R.WILLIAMSON | 2AZ0 Compare |
1XWP | 1XWP | A | 15 | 5 | SOLUTION NMR | 2-15-05 | synthetic | SOLUTION STRUCTURE OF AUCGCA LOOP | T.SAKAMOTO,A.OGURO,G.KAWAI,T.OHTSU,Y.NAKAMURA | |
4FTS | 4FTS | R | 15 | 0 | 3.2 | 8-01-12 | SPODOPTERA FRUGIPERDA | CRYSTAL STRUCTURE OF THE N363T MUTANT OF THE FLOCK HOUSE VIRUS CAPSID | J.A.SPEIR,Z.CHEN,V.S.REDDY,J.E.JOHNSON | 4FTE Compare |
1QFQ | 1QFQ | A | 435 | 145 | SOLUTION NMR | 4-20-99 | ENTEROBACTERIA PHAGE LAMBDA | BACTERIOPHAGE LAMBDA N-PROTEIN-NUTBOXB-RNA COMPLEX | M.SCHAERPF,H.STICHT,P.ROESCH | 1HJI Compare |
397D | 397D | AB | 27 | 11 | 1.3 | 9-11-98 | synthetic,synthetic | A 1.3 A RESOLUTION CRYSTAL STRUCTURE OF THE HIV-1 TRANS- ACTIVATION RESPONSE REGION RNA STEM REVEALS A METAL ION- DEPENDENT BULGE CONFORMATION | J.A.IPPOLITO,T.A.STEITZ | |
1CSL | 1CSL | AB | 28 | 11 | 1.6 | 2-14-00 | synthetic,synthetic | CRYSTAL STRUCTURE OF THE RRE HIGH AFFINITY SITE | J.A.IPPOLITO,T.A.STEITZ | |
1SDS | 1SDS | D | 45 | 0 | 1.8 | 5-18-04 | synthetic | STRUCTURE OF PROTEIN L7AE BOUND TO A K-TURN DERIVED FROM AN ARCHAEAL BOX H/ACA SRNA | T.HAMMA,A.FERRE-D'AMARE | |
2C4Z | 2C4Z | R | 26 | 10 | 2.6 | 1-05-06 | ENTEROBACTERIO PHAGE MS2 | MS2-RNA HAIRPIN (2SU -5-6) COMPLEX | E.GRAHN,T.MOSS,C.HELGSTRAND,K.FRIDBORG,M.SUNDARAM,K.TARS, H.LAGO,N.J.STONEHOUSE,D.R.DAVIS,P.G.STOCKLEY,L.LILJAS | 2C51 2BNY Compare |
1Q75 | 1Q75 | A | 300 | 120 | SOLUTION NMR | 12-23-03 | synthetic | SOLUTION STRUCTURE OF THE DYSKERATOSIS CONGENITA MUTANT P2B HAIRPIN FROM HUMAN TELOMERASE RNA | C.A.THEIMER,L.D.FINGER,J.FEIGON | |
2RRC | 2RRC | A | 231 | 90 | SOLUTION NMR | 6-29-11 | synthetic | SOLUTION STRUCTURE OF RNA APTAMER AGAINST AML1 RUNT DOMAIN | Y.NOMURA,K.FUJIWARA,M.CHIBA,J.FUKUNAGA,Y.TANAKA,H.IIBUCHI,T.TANAKA, Y.NAKAMURA,G.KAWAI,T.KOZU,T.SAKAMOTO | |
1OQ0 | 1OQ0 | A | 300 | 120 | SOLUTION NMR | 5-13-03 | synthetic | P6.1 STEM LOOP FROM THE ACTIVATION DOMAIN OF HTR | T.LEEPER,N.LEULLIOT,G.VARANI | |
2F8K | 2F8K | B | 15 | 6 | 2.0 | 1-24-06 | synthetic | SEQUENCE SPECIFIC RECOGNITION OF RNA HAIRPINS BY THE SAM DOMAIN OF VTS1 | T.AVIV,Z.LIN,G.BEN-ARI,C.A.SMIBERT,F.SICHERI | |
1A4T | 1A4T | A | 300 | 115 | SOLUTION NMR | 4-29-98 | synthetic | SOLUTION STRUCTURE OF PHAGE P22 N PEPTIDE-BOX B RNA COMPLEX, NMR, 20 STRUCTURES | Z.CAI,A.A.GORIN,R.FREDERICK,X.YE,W.HU,A.MAJUMDAR,A.KETTANI, D.J.PATEL | |
3OG8 | 3OG8 | CD | 28 | 14 | 2.4 | 11-03-10 | synthetic | CRYSTAL STRUCTURE OF HUMAN RIG-I CTD BOUND TO A 14-BP BLUNT-ENDED DSRNA | P.LI | |
4AL7 | 4AL7 | B | 14 | 6 | 2.3 | 6-13-12 | PSEUDOMONAS AERUGINOSA | CRYSTAL STRUCTURE OF THE CSY4-MINIMAL CRRNA COMPLEX | R.E.HAURWITZ,S.H.STERNBERG,J.A.DOUDNA | 4AL6 2XLJ 2XLK Compare |
1KOD | 1KOD | AB | 25 | 6 | SOLUTION NMR | 11-08-96 | synthetic,synthetic | RNA APTAMER COMPLEXED WITH CITRULLINE, NMR | Y.S.YANG,M.KOCHOYAN,P.BURGSTALLER,E.WESTHOF,M.FAMULOK | 1KOC Compare |
1G2J | 1G2J | A | 14 | 6 | 2.0 | 12-06-00 | synthetic | RNA OCTAMER R(CCCP*GGGG) CONTAINING PHENYL RIBONUCLEOTIDE | G.MINASOV,J.MATULIC-ADAMIC,C.J.WILDS,P.HAEBERLI,N.USMAN, L.BEIGELMAN,M.EGLI | |
1F85 | 1F85 | A | 280 | 68 | SOLUTION NMR | 11-17-00 | synthetic | SOLUTION STRUCTURE OF HCV IRES RNA DOMAIN IIIE | P.J.LUKAVSKY,G.A.OTTO,A.M.LANCASTER,P.SARNOW,J.D.PUGLISI | |
1TFY | 1TFY | FI | 73 | 30 | 3.2 | 8-10-04 | synthetic,synthetic,synthetic,synthetic | HOW CCA IS ADDED TO THE 3' END OF IMMATURE TRNA WITHOUT THE USE OF AN OLIGONUCLEOTIDE TEMPLATE | Y.XIONG,T.A.STEITZ | |
4DB2 | 4DB2 | EF | 82 | 37 | 3.2 | 8-29-12 | synthetic | MSS116P DEAD-BOX HELICASE DOMAIN 2 BOUND TO AN RNA DUPLEX | A.L.MALLAM,M.DEL CAMPO,B.D.GILMAN,D.J.SIDOTE,A.LAMBOWITZ | |
4A2X | 4A2X | NO | 56 | 27 | 4.0 | 10-19-11 | SYNTHETIC CONSTRUCT,SYNTHETIC CONSTRUCT | STRUCTURE OF DUCK RIG-I C-TERMINAL DOMAIN (CTD) WITH 14-MER DSRNA | E.KOWALINSKI,T.LUNARDI,A.A.MCCARTHY,S.CUSACK | |
1ROQ | 1ROQ | A | 140 | 58 | SOLUTION NMR | 5-18-04 | synthetic | EXTENDING THE FAMILY OF UNCG-LIKE TETRALOOP MOTIFS: NMR STRUCTURE OF A CACG TETRALOOP FROM COXSACKIEVIRUS B3 | Z.DU,J.YU,R.ANDINO,T.L.JAMES | |
1MY9 | 1MY9 | AB | 28 | 11 | SOLUTION NMR | 10-07-03 | synthetic | SOLUTION STRUCTURE OF A K+ CATION STABILIZED DIMERIC RNA QUADRUPLEX CONTAINING TWO G:G(:A):G:G(:A) HEXADS, G:G:G:G TETRADS AND UUUU LOOPS | H.LIU,A.MATSUGAMI,M.KATAHIRA,S.UESUGI | |
1A3M | 1A3M | AB | 540 | 202 | SOLUTION NMR | 4-29-98 | synthetic,synthetic | PAROMOMYCIN BINDING INDUCES A LOCAL CONFORMATIONAL CHANGE IN THE A SITE OF 16S RRNA, NMR, 20 STRUCTURES | D.FOURMY,S.YOSHIZAWA,J.D.PUGLISI | |
2B3J | 2B3J | E | 28 | 7 | 2.0 | 1-24-06 | synthetic | CRYSTAL STRUCTURE OF STAPHYLOCOCCUS AUREUS TRNA ADENOSINE DEAMINASE, TADA, IN COMPLEX WITH RNA | H.C.LOSEY,A.J.RUTHENBURG,G.L.VERDINE | |
433D | 433D | AB | 28 | 14 | 2.1 | 12-04-98 | synthetic | CRYSTAL STRUCTURE OF A 14 BASE PAIR RNA DUPLEX WITH NONSYMMETRICAL TANDEM G.U WOBBLE BASE PAIRS | J.TRIKHA,D.J.FILMAN,J.M.HOGLE | |
2BX2 | 2BX2 | R | 14 | 0 | 2.9 | 10-14-05 | synthetic | CATALYTIC DOMAIN OF E. COLI RNASE E | M.J.MARCAIDA,A.J.CALLAGHAN,W.G.SCOTT,B.F.LUISI | |
2I91 | 2I91 | CD | 22 | 7 | 2.6 | 10-17-06 | synthetic,synthetic | KDA RO AUTOANTIGEN IN COMPLEX WITH A FRAGMENT OF MISFOLDED RNA | K.M.REINISCH,A.J.STEIN | |
2Y95 | 2Y95 | A | 140 | 50 | SOLUTION NMR | 10-26-11 | HOMO SAPIENS | SOLUTION STRUCTURE OF AUCG TETRALOOP HAIRPIN FOUND IN HUMAN XIST RNA A-REPEATS ESSENTIAL FOR X-INACTIVATION | M.M.DUSZCZYK,M.SATTLER | |
1IK1 | 1IK1 | A | 14 | 5 | SOLUTION NMR | 7-18-01 | synthetic | SOLUTION STRUCTURE OF AN RNA HAIRPIN FROM HRV-14 | H.HUANG,A.ALEXANDROV,X.CHEN,T.W.BARNES III,H.ZHANG,K.DUTTA, S.M.PASCAL | |
2EVY | 2EVY | A | 252 | 90 | SOLUTION NMR | 8-22-06 | synthetic | GNYA TETRANUCLEOTIDE LOOPS FOUND IN POLIOVIRUS ORIL BY IN VIVO SELEX (UN)EXPECTEDLY FORM A YNMG-LIKE STRUCTURE | W.J.G.MELCHERS,J.ZOLL,M.TESSARI,D.V.BAKHMUTOV,A.P.GMYL, V.I.AGOL,H.A.HEUS | |
4FSJ | 4FSJ | R | 14 | 0 | 3.5 | 8-01-12 | SPODOPTERA FRUGIPERDA | CRYSTAL STRUCTURE OF THE VIRUS LIKE PARTICLE OF FLOCK HOUSE VIRUS | J.A.SPEIR,Z.CHEN,V.S.REDDY,J.E.JOHNSON | |
3P59 | 3P59 | ABCDEFGH | 94 | 36 | 2.2 | 4-06-11 | synthetic,synthetic | FIRST CRYSTAL STRUCTURE OF A RNA NANOSQUARE | S.DIBROV,T.HERMANN,J.MCLEAN,J.PARSONS | |
3OIN | 3OIN | C | 14 | 4 | 1.9 | 12-01-10 | synthetic | CRYSTAL STRUCTURE OF SACCHAROMYCES CEREVISIAE NEP1/EMG1 BOUND TO S- ADENOSYLHOMOCYSTEINE AND 1 MOLECULE OF COGNATE RNA | S.R.THOMAS,N.LARONDE-LEBLANC | 3OIJ Compare |
3HJF | 3HJF | Y | 14 | 0 | 3.1 | 10-06-09 | synthetic | CRYSTAL STRUCTURE OF T. THERMOPHILUS ARGONAUTE E546 MUTANT PROTEIN COMPLEXED WITH DNA GUIDE STRAND AND 15-NT RNA TARGET STRAND | Y.WANG,H.LI,G.SHENG,D.J.PATEL | |
1K4B | 1K4B | A | 280 | 100 | SOLUTION NMR | 12-19-01 | synthetic | STRUCTURE OF AGUU RNA TETRALOOP, NMR, 20 STRUCTURES | H.WU,P.K.YANG,S.E.BUTCHER,S.KANG,G.CHANFREAU,J.FEIGON | |
6MSF | 6MSF | RS | 24 | 8 | 2.8 | 7-08-98 | ENTEROBACTERIO PHAGE MS2,synthetic | F6 APTAMER MS2 COAT PROTEIN COMPLEX | M.A.CONVERY,S.ROWSELL,N.J.STONEHOUSE,A.D.ELLINGTON,I.HIRAO, J.B.MURRAY,D.S.PEABODY,S.E.V.PHILLIPS,P.G.STOCKLEY | |
3AVY | 3AVY | GT | 22 | 1 | 2.6 | 1-18-12 | synthetic,synthetic | STRUCTURE OF VIRAL RNA POLYMERASE COMPLEX 6 | D.TAKESHITA,K.TOMITA | |
1C0O | 1C0O | A | 266 | 109 | SOLUTION NMR | 8-31-99 | TETRAHYMENA THERMOPHILA | SOLUTION STRUCTURE OF THE P5 HAIRPIN FROM A GROUP I INTRON COMPLEXED WITH COBALT (III) HEXAMMINE, NMR, 19 CONVERGED STRUCTURES | G.COLMENAREJO,I.TINOCO JR. | |
1FHK | 1FHK | A | 210 | 80 | SOLUTION NMR | 3-21-01 | synthetic | NMR STRUCTURE OF THE 690 LOOP OF 16 S RRNA OF E. COLI | S.V.MOROSYUK,P.R.CUNNINGHAM,J.SANTALUCIA JR. | |
2QKK | 2QKK | C | 83 | 0 | 3.2 | 11-13-07 | HOMO SAPIENS | HUMAN RNASE H CATALYTIC DOMAIN MUTANT D210N IN COMPLEX WITH 14-MER RNA/DNA HYBRID | M.NOWOTNY,S.A.GAIDAMAKOV,R.GHIRLANDO,S.M.CERRITELLI, R.J.CROUCH,W.YANG | |
1MHK | 1MHK | LS | 26 | 9 | 2.5 | 9-06-02 | synthetic,synthetic | CRYSTAL STRUCTURE ANALYSIS OF A 26MER RNA MOLECULE, REPRESENTING A NEW RNA MOTIF, THE HOOK-TURN | S.SZEP,J.WANG,P.B.MOORE | |
4F3T | 4F3T | R | 14 | 0 | 2.2 | 5-30-12 | HOMO SAPIENS | HUMAN ARGONAUTE-2 - MIR-20A COMPLEX | E.ELKAYAM,C.-D.KUHN,A.TOCILJ,L.JOSHUA-TOR | |
1DUQ | 1DUQ | AB | 104 | 44 | 2.1 | 5-16-00 | synthetic,synthetic | CRYSTAL STRUCTURE OF THE REV BINDING ELEMENT OF HIV-1 | L.-W.HUNG,E.L.HOLBROOK,S.R.HOLBROOK | |
1K4A | 1K4A | A | 280 | 114 | SOLUTION NMR | 12-19-01 | synthetic | STRUCTURE OF AGAA RNA TETRALOOP, NMR, 20 STRUCTURES | H.WU,P.K.YANG,S.E.BUTCHER,S.KANG,G.CHANFREAU,J.FEIGON | |
2R93 | 2R93 | R | 14 | 6 | 4.0 | 11-27-07 | synthetic | ELONGATION COMPLEX OF RNA POLYMERASE II WITH A HEPATITIS DELTA VIRUS-DERIVED RNA STEM LOOP | E.LEHMANN,F.BRUECKNER,P.CRAMER | |
1RNA | 1RNA | AB | 28 | 14 | 2.2 | 4-15-91 | synthetic | CRYSTALLOGRAPHIC STRUCTURE OF AN RNA HELIX: [U(U-A)6A]2 | A.C.DOCK-BREGEON,B.CHEVRIER,A.PODJARNY,J.JOHNSON,J.S.DE BEAR,G.R.GOUGH,P.T.GILHAM,D.MORAS | |
7MSF | 7MSF | R | 25 | 8 | 2.8 | 11-11-98 | ENTEROBACTERIO PHAGE MS2 | MS2 PROTEIN CAPSID/RNA COMPLEX | S.ROWSELL,N.J.STONEHOUSE,M.A.CONVERY,C.J.ADAMS, A.D.ELLINGTON,I.HIRAO,D.S.PEABODY,P.G.STOCKLEY, S.E.V.PHILLIPS | |
333D | 333D | A | 14 | 6 | 2.5 | 10-16-97 | synthetic | THE CRYSTAL STRUCTURE OF AN RNA OLIGOMER INCORPORATING TANDEM ADENOSINE-INOSINE MISMATCHES | R.J.CARTER,K.J.BAEYENS,J.SANTALUCIA JR.,D.H.TURNER, S.R.HOLBROOK | |
4H5P | 4H5P | E | 28 | 0 | 2.1 | 11-07-12 | synthetic | CRYSTAL STRUCTURE OF RIFT VALLEY FEVER VIRUS NUCLEOCAPSID PROTEIN TETRAMER BOUND TO SINGLE-STRANDED RNA | D.D.RAYMOND,J.L.SMITH | |
1L3Z | 1L3Z | A | 14 | 6 | 2.0 | 2-25-03 | synthetic | CRYSTAL STRUCTURE ANALYSIS OF AN RNA HEPTAMER | K.SHI,B.PAN,M.SUNDARALINGAM | |
2C50 | 2C50 | R | 27 | 8 | 2.6 | 1-05-06 | ENTEROBACTERIO PHAGE MS2 | MS2-RNA HAIRPIN (A -5) COMPLEX | E.GRAHN,T.MOSS,C.HELGSTRAND,K.FRIDBORG,M.SUNDARAM,K.TARS, H.LAGO,N.J.STONEHOUSE,D.R.DAVIS,P.G.STOCKLEY,L.LILJAS | |
2IZ9 | 2IZ9 | R | 28 | 9 | 2.9 | 7-27-06 | ENTEROBACTERIO PHAGE MS2 | MS2-RNA HAIRPIN (4ONE-5) COMPLEX | E.GRAHN,N.J.STONEHOUSE,C.J.ADAMS,K.FRIDBORG,L.BEIGELMAN, J.MATULIC-ADAMIC,S.L.WARRINER,P.G.STOCKLEY,L.LILJAS | |
2KOC | 2KOC | A | 280 | 120 | SOLUTION NMR | 12-01-09 | synthetic | NMR SOLUTION STRUCTURE OF A 14-MER HAIRPIN RNA WITH CUUCGG TETRALOOP | S.NOZINOVIC,B.FUERTIG,H.R.A.JONKER,C.RICHTER,H.SCHWALBE | |
1HS2 | 1HS2 | A | 13 | 4 | SOLUTION NMR | 8-29-01 | synthetic | SOLUTION STRUCTURE OF RNA HAIRPIN LOOP UUAAGU AS PART OF HAIRPIN R(GCGUUAAGUCGCA) | H.ZHANG,M.A.FOUNTAIN,T.R.KRUGH | 1HS8 1HS3 1HS4 1HS1 Compare |
1NUV | 1NUV | CDEF | 96 | 38 | 1.8 | 8-19-03 | synthetic,synthetic | THE LEADZYME RIBOZYME BOUND TO MG(H2O)6(II) AND SR(II) AT 1.8 A RESOLUTION | J.E.WEDEKIND,D.B.MCKAY | 1NUJ Compare |
3CGS | 3CGS | AB | 24 | 10 | 1.6 | 7-01-08 | synthetic,synthetic | X-RAY STRUCTURE CONTAINING THE PSEUDOURIDYLATED U2 SNRNA AND MAMMALIAN INTRON BRANCH SITE CONSENSUS SEQUENCES | Y.LIN,C.L.KIELKOPF | |
1VOP | 1VOP | A | 429 | 165 | SOLUTION NMR | 12-24-97 | synthetic | CONSERVED RNA COMPONENT OF THE PEPTIDYL TRANSFERASE CENTER, NMR, 33 STRUCTURES | E.V.PUGLISI,J.D.PUGLISI | |
1JZC | 1JZC | A | 13 | 3 | SOLUTION NMR | 10-07-03 | synthetic | THE SOLUTION STRUCTURE OF THE MUTANT 5'AUG3' TRILOOP IN THE RNA PROMOTER REGION OF THE BROME MOSAIC VIRUS GENOMIC (+)- RNA | C.-H.KIM,C.C.KAO | |
3HM9 | 3HM9 | Y | 13 | 0 | 3.3 | 10-06-09 | synthetic | CRYSTAL STRUCTURE OF T. THERMOPHILUS ARGONAUTE COMPLEXED WITH DNA GUIDE STRAND AND 19-NT RNA TARGET STRAND | Y.WANG,H.LI,G.SHENG,D.J.PATEL | |
1I4C | 1I4C | A | 13 | 5 | SOLUTION NMR | 4-21-01 | synthetic | THE SOLUTION STRUCTURE OF THE MINOR FAMILY OF THE MUTANT STEM LOOP C 5'UUA3' TRILOOP OF BROME MOSAIC VIRUS (+) STRAND RNA | I.TINOCO JR.,C.-H.KIM | |
1AM0 | 1AM0 | A | 128 | 19 | SOLUTION NMR | 7-23-97 | synthetic | AMP RNA APTAMER COMPLEX, NMR, 8 STRUCTURES | F.JIANG,R.A.KUMAR,R.A.JONES,D.J.PATEL | |
1FUF | 1FUF | AB | 26 | 12 | 1.7 | 11-09-01 | synthetic | CRYSTAL STRUCTURE OF A 14BP RNA OLIGONUCLEOTIDE CONTAINING DOUBLE UU BULGES: A NOVEL INTRAMOLECULAR U*(AU) BASE TRIPLE | J.DENG,Y.XIONG,C.SUDARSANAKUMAR,K.SHI,M.SUNDARALINGAM | 1IK5 Compare |
3CGP | 3CGP | AB | 24 | 10 | 1.6 | 7-01-08 | synthetic,synthetic | X-RAY STRUCTURE OF A PSEUDOURIDINE-CONTAINING YEAST SPLICEOSOMAL U2 SNRNA-INTRON BRANCH SITE DUPLEX BOUND TO IODIDE IONS | Y.LIN,C.L.KIELKOPF | 3CGQ Compare |
2IZM | 2IZM | R | 26 | 8 | 2.7 | 7-03-07 | BACTERIOPHAGE MS2 | MS2-RNA HAIRPIN (C-10) COMPLEX | C.HELGSTRAND,E.GRAHN,T.MOSS,N.J.STONEHOUSE,K.TARS, P.G.STOCKLEY,L.LILJAS | 1ZDH Compare |
1TFW | 1TFW | EH | 51 | 19 | 2.2 | 8-10-04 | synthetic,synthetic,synthetic,synthetic | HOW CCA IS ADDED TO THE 3' END OF IMMATURE TRNA WITHOUT THE USE OF AN OLIGONUCLEOTIDE TEMPLATE | Y.XIONG,T.A.STEITZ | |
1EFS | 1EFS | B | 130 | 0 | SOLUTION NMR | 3-06-00 | synthetic | CONFORMATION OF A DNA-RNA HYBRID | V.LARUE,E.HANTZ | |
2IX1 | 2IX1 | B | 13 | 0 | 2.7 | 10-05-06 | synthetic | RNASE II D209N MUTANT | C.FRAZAO,C.E.MCVEY,M.AMBLAR,A.BARBAS,C.VONRHEIN, C.M.ARRAIANO,M.A.CARRONDO | |
1I46 | 1I46 | A | 13 | 4 | SOLUTION NMR | 4-21-01 | synthetic | THE SOLUTION STRUCTURE OF THE MUTANT STEM LOOP C 5'GUA3' TRILOOP OF BROME MOSAIC VIRUS (+) STRAND RNA | C.-H.KIM,I.TINOCO JR. | |
2KM8 | 2KM8 | A | 130 | 0 | SOLUTION NMR | 7-28-10 | synthetic | INTERDOMAIN RRM PACKING CONTRIBUTES TO RNA RECOGNITION IN THE RNA15, HRP1, ANCHOR RNA 3' PROCESSING TERNARY COMPLEX | T.C.LEEPER,G.VARANI | |
1K8S | 1K8S | AB | 25 | 12 | SOLUTION NMR | 11-14-01 | synthetic,synthetic | BULGED ADENOSINE IN AN RNA DUPLEX | V.THIVIYANATHAN,A.B.GULIAEV,N.B.LEONTIS,D.G.GORENSTEIN | |
1I4B | 1I4B | A | 13 | 5 | SOLUTION NMR | 4-21-01 | synthetic | THE SOLUTION STRUCTURE OF THE MAJOR FAMILY OF THE MUTANT STEM LOOP C 5'UUA3' TRILOOP OF BROME MOSAIC VIRUS (+) STRAND RNA | I.TINOCO JR.,C.-H.KIM | |
3AVX | 3AVX | GT | 22 | 9 | 2.4 | 1-18-12 | synthetic,synthetic | STRUCTURE OF VIRAL RNA POLYMERASE COMPLEX 5 | D.TAKESHITA,K.TOMITA | |
2R22 | 2R22 | AB | 26 | 13 | 1.4 | 9-25-07 | synthetic | STRUCTURE OF THE NATIVE RNA TRIDECAMER R(GCGUUUGAAACGC) AT 1.5 A (NATMN) | Y.TIMSIT,S.BOMBARD | |
3CGR | 3CGR | AB | 24 | 10 | 2.1 | 7-01-08 | synthetic,synthetic | X-RAY STRUCTURE CONTAINING THE PSEUDOURIDYLATED U2 SNRNA AND INTRON BRANCH SITE CONSENSUS SEQUENCES | Y.LIN,C.L.KIELKOPF | |
3MQK | 3MQK | DE | 22 | 5 | 2.8 | 12-29-10 | synthetic,synthetic | CBF5-NOP10-GAR1 COMPLEX BINDING WITH 17MER RNA CONTAINING ACA TRINUCLEOTIDE | J.ZHOU,B.LIANG,H.LI | |
3GTP | 3GTP | R | 13 | 0 | 3.9 | 6-09-09 | synthetic | BACKTRACKED RNA POLYMERASE II COMPLEX WITH 24MER RNA | D.WANG,D.A.BUSHNELL,X.HUANG,K.D.WESTOVER,M.LEVITT, R.D.KORNBERG | |
1ESH | 1ESH | A | 13 | 6 | SOLUTION NMR | 4-24-00 | synthetic | THE SOLUTION STRUCTURE OF THE STEM LOOP C 5'AUA3' TRILOOP OF BROME MOSAIC VIRUS (+) STRAND RNA | C.-H.KIM,C.C.KAO,I.TINOCO JR. | |
1BR3 | 1BR3 | A | 13 | 0 | 3.0 | 2-23-99 | synthetic | CRYSTAL STRUCTURE OF AN 82-NUCLEOTIDE RNA-DNA COMPLEX FORMED BY THE 10-23 DNA ENZYME | J.NOWAKOWSKI,P.J.SHIM,G.S.PRASAD,C.D.STOUT,G.F.JOYCE | |
429D | 429D | CD | 48 | 16 | 2.7 | 3-01-99 | synthetic,synthetic | CRYSTAL STRUCTURE OF A LEADZYME; METAL BINDING AND IMPLICATIONS FOR CATALYSIS | J. E.WEDEKIND,D. B.MCKAY | |
1ELH | 1ELH | AB | 150 | 59 | SOLUTION NMR | 1-31-94 | ESCHERICHIA COLI,ESCHERICHIA COLI | NMR ANALYSIS OF HELIX I FROM THE 5S RNA OF ESCHERICHIA COLI | S.WHITE,P.MOORE | |
3ZC0 | 3ZC0 | NO | 26 | 11 | 3.0 | 1-23-13 | SYNTHETIC CONSTRUCT | STRUCTURE OF AFC3PO - DUPLEX RNA COMPLEX | E.A.PARIZOTTO,E.D.LOWE,J.S.PARKER | |
2GJE | 2GJE | RS | 18 | 0 | 3.4 | 9-05-06 | synthetic,synthetic | STRUCTURE OF A GUIDERNA-BINDING PROTEIN COMPLEX BOUND TO A GRNA | M.A.SCHUMACHER,E.KARAMOOZ,A.ZIKOVA,L.TRANTIREK,J.LUKES | |
2XLI | 2XLI | B | 13 | 5 | 2.3 | 9-22-10 | PSEUDOMONAS AERUGINOSA | CRYSTAL STRUCTURE OF THE CSY4-CRRNA COMPLEX, MONOCLINIC FORM | R.E.HAURWITZ,M.JINEK,B.WIEDENHEFT,K.ZHOU,J.A.DOUDNA | |
1I9X | 1I9X | AB | 26 | 12 | 2.2 | 9-05-01 | synthetic | CRYSTAL STRUCTURE OF BPS-U2 SNRNA DUPLEX | J.A.BERGLUND,M.ROSBASH,S.C.SCHULTZ | |
3LRN | 3LRN | CD | 26 | 12 | 2.6 | 6-02-10 | synthetic | CRYSTAL STRUCTURE OF HUMAN RIG-I CTD BOUND TO A 14 BP GC 5' PPP DSRNA | P.LI | |
2ATW | 2ATW | B | 24 | 0 | 2.2 | 10-11-05 | synthetic | STRUCTURE OF A MYCOBACTERIUM TUBERCULOSIS NUSA-RNA COMPLEX | B.BEUTH,S.PENNELL,K.B.ARNVIG,S.R.MARTIN,I.A.TAYLOR | |
1ZSE | 1ZSE | R | 12 | 4 | 3.0 | 5-09-06 | ENTEROBACTERIO PHAGE MS2 | RNA STEMLOOP FROM BACTERIOPHAGE QBETA COMPLEXED WITH AN N87S MUTANT MS2 CAPSID | W.T.HORN,K.TARS,E.GRAHN,C.HELGSTRAND,A.J.BARON,H.LAGO, C.J.ADAMS,D.S.PEABODY,S.E.V.PHILLIPS,N.J.STONEHOUSE, L.LILJAS,P.G.STOCKLEY | 2BS1 2BS0 Compare |
354D | 354D | AB | 22 | 8 | 1.5 | 11-26-97 | ESCHERICHIA COLI,ESCHERICHIA COLI | STRUCTURE OF LOOP E FROM E. COLI 5S RRNA | C.C.CORRELL,B.FREEBORN,P.B.MOORE,T.A.STEITZ | |
3GTL | 3GTL | R | 12 | 0 | 3.4 | 6-09-09 | synthetic | BACKTRACKED RNA POLYMERASE II COMPLEX WITH 13MER WITH G<>U MISMATCH | D.WANG,D.A.BUSHNELL,X.HUANG,K.D.WESTOVER,M.LEVITT, R.D.KORNBERG | 3GTJ 3GTG 3GTO Compare |
3CJZ | 3CJZ | AB | 24 | 10 | 1.8 | 10-14-08 | synthetic | EFFECTS OF N2,N2-DIMETHYLGUANOSINE ON RNA STRUCTURE AND STABILITY: CRYSTAL STRUCTURE OF AN RNA DUPLEX WITH TANDEM M22G:A PAIRS | P.S.PALLAN,C.KREUTZ,S.BOSIO,R.MICURA,M.EGLI | |
1YYW | 1YYW | EF | 96 | 48 | 2.8 | 11-22-05 | synthetic | CRYSTAL STRUCTURE OF RNASE III FROM AQUIFEX AEOLICUS COMPLEXED WITH DOUBLE STRANDED RNA AT 2.8-ANGSTROM RESOLUTION | J.GAN,J.E.TROPEA,B.P.AUSTIN,D.L.COURT,D.S.WAUGH,X.JI | |
3BSU | 3BSU | D | 24 | 0 | 2.1 | 3-25-08 | HOMO SAPIENS | HYBRID-BINDING DOMAIN OF HUMAN RNASE H1 IN COMPLEX WITH 12- MER RNA/DNA | M.NOWOTNY,S.M.CERRITELLI,R.GHIRLANDO,S.A.GAIDAMAKOV, R.J.CROUCH,W.YANG | |
2R20 | 2R20 | AB | 24 | 11 | 1.3 | 9-25-07 | synthetic | STRUCTURE OF THE RNA BROMINATED TRIDECAMER R(GCGUU- 5BUGAAACGC) AT 1.3 A (BR2) | Y.TIMSIT,S.BOMBARD | 2R21 2R1S Compare |
3SSF | 3SSF | A | 12 | 0 | 1.6 | 2-08-12 | synthetic | CRYSTAL STRUCTURE OF RNA:DNA DODECAMER CORRESPONDING TO HIV-1 POLYPURINE TRACT, AT 1.6 A RESOLUTION. | P.DROZDZAL,K.MICHALSKA,R.KIERZEK,L.LOMOZIK,M.JASKOLSKI | |
2RQJ | 2RQJ | AB | 216 | 146 | SOLUTION NMR | 11-17-09 | synthetic | QUADRUPLEX STRUCTURE OF AN RNA APTAMER AGAINST BOVINE PRION PROTEIN | M.KATAHIRA,T.MASHIMA,A.MATSUGAMI,F.NISHIKAWA,S.NISHIKAWA | 2RSK Compare |
1ZIG | 1ZIG | A | 120 | 50 | SOLUTION NMR | 3-12-97 | synthetic | GAGA RNA TETRALOOP, NMR, 10 STRUCTURES | F.M.JUCKER,H.A.HEUS,P.F.YIP,E.MOORS,A.PARDI | 1ZIH 1ZIF Compare |
1AFX | 1AFX | A | 156 | 60 | SOLUTION NMR | 5-15-97 | synthetic | UGAA EUKARYOTIC RIBOSOMAL RNA TETRALOOP, NMR, 13 STRUCTURES | S.E.BUTCHER,T.DIECKMANN,J.FEIGON | |
1SDR | 1SDR | AB | 48 | 24 | 2.6 | 2-27-95 | synthetic,synthetic | CRYSTAL STRUCTURE OF AN RNA DODECAMER CONTAINING THE ESCHERICHIA COLI SHINE-DALGARNO SEQUENCE | H.SCHINDELIN,M.ZHANG,R.BALD,J.-P.FUERSTE,V.A.ERDMANN, U.HEINEMANN | |
3TMI | 3TMI | BC | 24 | 11 | 2.9 | 9-21-11 | synthetic | STRUCTURAL BASIS FOR RNA RECOGNITION AND ACTIVATION OF RIG-I | F.JIANG,M.T.MILLER,J.MARCOTRIGIANO | |
1AJL | 1AJL | AB | 19 | 6 | SOLUTION NMR | 7-07-97 | TETRAHYMENA THERMOPHILA,TETRAHYMENA THERMOPHILA | FIVE-NUCLEOTIDE BULGE LOOP FROM TETRAHYMENA THERMOPHILA GROUP I INTRON | K.J.LUEBKE,S.M.LANDRY,I.TINOCO JUNIOR | |
3QJL | 3QJL | RX | 24 | 2 | 2.7 | 2-08-12 | synthetic | ONE RAMP PROTEIN BINDING DIFFERENT RNA SUBSTRATES | R.WANG,H.ZHENG,G.PREAMPLUME,H.LI | |
157D | 157D | AB | 24 | 12 | 1.8 | 5-31-94 | synthetic | CRYSTAL AND MOLECULAR STRUCTURE OF R(CGCGAAUUAGCG): AN RNA DUPLEX CONTAINING TWO G(ANTI).A(ANTI) BASE-PAIRS | G.A.LEONARD,K.E.MCAULEY-HECHT,S.EBEL,D.M.LOUGH,T.BROWN, W.N.HUNTER | 1YYO 1YYK 1AL5 1CX5 1AC3 Compare |
353D | 353D | AB | 24 | 11 | 2.4 | 11-10-97 | synthetic,synthetic | CRYSTAL STRUCTURE OF DOMAIN A OF THERMUS FLAVUS 5S RRNA AND THE CONTRIBUTION OF WATER MOLECULES TO ITS STRUCTURE | C.BETZEL,S.LORENZ,J.P.FURSTE,R.BALD,M.ZHANG,T.R.SCHNEIDER, K.S.WILSON,V.A.ERDMANN | |
4GL2 | 4GL2 | CD | 48 | 22 | 3.6 | 1-09-13 | synthetic,synthetic | STRUCTURAL BASIS FOR DSRNA DUPLEX BACKBONE RECOGNITION BY MDA5 | B.WU,S.HUR | |
2KBP | 2KBP | AB | 240 | 98 | SOLUTION NMR | 3-24-09 | synthetic | SOLUTION STRUCTURE OF A G-QUADRUPLEX OF HUMAN TELOMERIC RNA | A.T.PHAN,H.MARTADINATA | |
2K7E | 2K7E | AB | 220 | 98 | SOLUTION NMR | 10-07-08 | synthetic,synthetic | NMR STRUCTURE OF THE HUMAN TRNALYS3 BOUND TO THE HIV GENOME LOOP I | Y.BILBILLE,F.P.A.VENDEIX,R.GUENTHER,A.MALKIEWICZ,X.ARIZA, J.VILARRASA,P.AGRIS | |
3FTM | 3FTM | AB | 46 | 18 | 2.7 | 2-24-09 | synthetic,synthetic | CLASS II LIGASE RIBOZYME PRODUCT-TEMPLATE DUPLEX, STRUCTURE 1 | J.N.PITT,A.R.FERRE-D'AMARE | |
280D | 280D | AB | 48 | 24 | 2.4 | 9-30-96 | engineered | THE STRUCTURE OF AN RNA DODECAMER SHOWS HOW TANDEM U-U BASE PAIRS INCREASE THE RANGE OF STABLE RNA STRUCTURES AND THE DIVERSITY OF RECOGNITION SITES | S.E.LIETZKE,C.L.BARNES,C.E.KUNDROT | 205D Compare |
1AJT | 1AJT | AB | 19 | 4 | SOLUTION NMR | 8-20-97 | synthetic,synthetic | FIVE-NUCLEOTIDE BULGE LOOP FROM TETRAHYMENA THERMOPHILA GROUP I INTRON, NMR, 1 STRUCTURE | K.J.LUEBKE,S.M.LANDRY,I.TINOCO JUNIOR | |
1RNG | 1RNG | A | 60 | 24 | SOLUTION NMR | 12-07-95 | synthetic | SOLUTION STRUCTURE OF THE CUUG HAIRPIN: A NOVEL RNA TETRALOOP MOTIF | F.M.JUCKER,A.PARDI | |
422D | 422D | AB | 24 | 8 | 2.6 | 6-03-03 | engineered | '-R(*GP*AP*UP*CP*AP*CP*UP*UP*CP*GP*GP*U)-3' | S.ESWARAMOORTHY,S.T.RAO,M.SUNDARALINGAM | |
1B7F | 1B7F | PQ | 24 | 2 | 2.6 | 5-03-99 | synthetic | SXL-LETHAL PROTEIN/RNA COMPLEX | N.HANDA,O.NUREKI,K.KURIMOTO,I.KIM,H.SAKAMOTO,Y.SHIMURA, Y.MUTO,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | |
3AVW | 3AVW | GT | 20 | 8 | 2.6 | 1-18-12 | synthetic,synthetic | STRUCTURE OF VIRAL RNA POLYMERASE COMPLEX 4 | D.TAKESHITA,K.TOMITA | |
3R2D | 3R2D | RS | 20 | 7 | 2.2 | 6-22-11 | AQUIFEX AEOLICUS | CRYSTAL STRUCTURE OF ANTITERMINATION FACTORS NUSB AND NUSE IN COMPLEX WITH DSRNA | J.R.STAGNO,X.JI | |
1QBP | 1QBP | AB | 72 | 29 | 2.1 | 11-26-99 | synthetic | CRYSTAL STRUCTURE OF A BROMINATED RNA HELIX WITH FOUR MISMATCHED BASE PAIRS | A.C.ANDERSON,R.H.O'NEIL,D.J.FILMAN,C.A.FREDERICK | |
2PY9 | 2PY9 | E | 24 | 0 | 2.6 | 6-12-07 | synthetic | PROTEIN-RNA INTERACTION INVOLVING KH1 DOMAIN FROM HUMAN POLY(C)-BINDING PROTEIN-2 | T.L.JAMES,Z.DU,J.K.LEE | |
2F87 | 2F87 | A | 156 | 52 | SOLUTION NMR | 8-08-06 | synthetic | SOLUTION STRUCTURE OF A GAAG TETRALOOP IN SRP RNA FROM PYROCOCCUS FURIOSUS | K.OKADA,M.TAKAHASHI,T.SAKAMOTO,K.NAKAMURA,A.KANAI,G KAWAI | |
2LA9 | 2LA9 | A | 128 | 40 | SOLUTION NMR | 8-03-11 | synthetic | NMR STRUCTURE OF PSEUDOURIDINE_ASL_TYR | A.P.DENMON,J.WANG,E.P.NIKONOWICZ | |
4GHA | 4GHA | IJ | 24 | 12 | 2.5 | 8-22-12 | synthetic | CRYSTAL STRUCTURE OF MARBURG VIRUS VP35 RNA BINDING DOMAIN BOUND TO 12-BP DSRNA | S.BALE,J.JEAN-PHILIPPE,Z.A.BORNHOLDT,C.K.KIMBERLIN,P.HALFMANN, M.A.ZANDONATTI,J.KUNERT,G.J.A.KROON,Y.KAWAOKA,I.J.MACRAE,I.A.WILSON, E.O.SAPHIRE | |
4ANG | 4ANG | R | 24 | 3 | 3.5 | 2-27-13 | PSEUDOMONAS PHAGE PRR1 | SMALL RNA PHAGE PRR1 IN COMPLEX WITH AN RNA OPERATOR FRAGMENT | M.PERSSON,K.TARS,L.LILJAS | |
3QJJ | 3QJJ | Q | 24 | 0 | 2.8 | 2-08-12 | synthetic | ONE RAMP PROTEIN BINDING DIFFERENT RNA SUBSTRATES | R.WANG,H.ZHENG,G.PREAMPLUME,H.LI | |
4EYA | 4EYA | lmnopqr | 240 | 45 | 3.2 | 6-20-12 | synthetic | CRYSTAL STRUCTURE OF A PLECTONEMIC RNA SUPERCOIL | J.R.STAGNO,X.JI | |
1ZBI | 1ZBI | C | 12 | 0 | 1.9 | 7-12-05 | synthetic | BACILLUS HALODURANS RNASE H CATALYTIC DOMAIN MUTANT D132N IN COMPLEX WITH 12-MER RNA/DNA HYBRID | M.NOWOTNY,S.A.GAIDAMAKOV,R.J.CROUCH,W.YANG | |
2L8F | 2L8F | AB | 220 | 90 | SOLUTION NMR | 8-31-11 | synthetic,synthetic | STRUCTURE OF A 4X4 NUCLEOTIDE RNA INTERNAL LOOP FROM AN R2 RETROTRANSPOSON | Y.LERMAN,S.D.KENNEDY,D.H.TURNER | |
1KD5 | 1KD5 | AB | 22 | 10 | 1.6 | 3-04-03 | synthetic | THE CRYSTAL STRUCTURE OF R(GGUCACAGCCC)2 METAL FREE FORM | V.KACER,S.A.SCARINGE,J.N.SCARSDALE,J.P.RIFE | 1KD4 1KD3 Compare |
2NUG | 2NUG | CDEF | 44 | 20 | 1.7 | 11-20-07 | synthetic,synthetic | CRYSTAL STRUCTURE OF RNASE III FROM AQUIFEX AEOLICUS COMPLEXED WITH DS-RNA AT 1.7-ANGSTROM RESOLUTION | J.H.GAN,G.SHAW,J.E.TROPEA,D.S.WAUGH,D.L.COURT,X.JI | |
1QCU | 1QCU | AB | 44 | 22 | 1.2 | 11-11-99 | synthetic,synthetic | CRYSTAL STRUCTURE OF AN 18 BASE PAIR COPY CONTROL RELATED RNA DUPLEX | P.S.KLOSTERMAN,S.A.SHAH,T.A.STEITZ | |
3HO1 | 3HO1 | Y | 11 | 0 | 2.6 | 10-06-09 | synthetic | CRYSTAL STRUCTURE OF T. THERMOPHILUS ARGONAUTE N546 MUTANT PROTEIN COMPLEXED WITH DNA GUIDE STRAND AND 12-NT RNA TARGET STRAND | Y.WANG,H.LI,G.SHENG,D.J.PATEL | 3HVR Compare |
3LRR | 3LRR | CD | 22 | 9 | 2.1 | 6-02-10 | synthetic | CRYSTAL STRUCTURE OF HUMAN RIG-I CTD BOUND TO A 12 BP AU RICH 5' PPP DSRNA | P.LI | |
3HOU | 3HOU | 3 | 22 | 0 | 3.2 | 7-28-09 | synthetic | COMPLETE RNA POLYMERASE II ELONGATION COMPLEX I WITH A T-U MISMATCH | J.F.SYDOW,F.BRUECKNER,A.C.M.CHEUNG,G.E.DAMSMA,S.DENGL, E.LEHMANN,D.VASSYLYEV,P.CRAMER | 3HOW 3HOZ Compare |
2LX1 | 2LX1 | AB | 22 | 8 | SOLUTION NMR | 11-21-12 | synthetic | MAJOR CONFORMATION OF THE INTERNAL LOOP 5'GAGU/3'UGAG | S.D.KENNEDY,D.H.TURNER | |
1BMV | 1BMV | M | 11 | 0 | 3.0 | 10-09-89 | BEAN POD MOTTLE VIRUS | PROTEIN-RNA INTERACTIONS IN AN ICOSAHEDRAL VIRUS AT 3.0 ANGSTROMS RESOLUTION | Z.CHEN,C.STAUFFACHER,Y.LI,T.SCHMIDT,W.BOMU,G.KAMER,M.SHANKS, G.LOMONOSSOFF,J.E.JOHNSON | |
1I3Y | 1I3Y | A | 378 | 146 | SOLUTION NMR | 4-04-01 | synthetic | SOLUTION STRUCTURE OF THE A LOOP OF 23S RIBOSOMAL RNA. | J.D.PUGLISI,S.C.BLANCHARD | |
3NCU | 3NCU | CD | 22 | 10 | 2.5 | 6-30-10 | synthetic | STRUCTURAL AND FUNCTIONAL INSIGHTS INTO PATTERN RECOGNITION BY THE INNATE IMMUNE RECEPTOR RIG-I | G.SHENG,H.LI | 2KXZ 2KY0 2KY1 Compare |
1LNT | 1LNT | AB | 22 | 11 | 1.7 | 6-03-03 | synthetic,synthetic | CRYSTAL STRUCTURE OF THE HIGHLY CONSERVED RNA INTERNAL LOOP OF SRP | J.DENG,Y.XIONG,B.PAN,M.SUNDARALINGAM | |
3FS0 | 3FS0 | AB | 21 | 8 | 2.3 | 2-24-09 | synthetic,synthetic | CLASS II LIGASE RIBOZYME PRODUCT-TEMPLATE DUPLEX, STRUCTURE 2 | J.N.PITT,A.R.FERRE-D'AMARE | |
3M3Y | 3M3Y | R | 11 | 0 | 3.2 | 5-12-10 | synthetic | RNA POLYMERASE II ELONGATION COMPLEX C | D.WANG,G.ZHU,X.HUANG,S.J.LIPPARD | 3GTM 3GTQ Compare |
2Q1O | 2Q1O | AB | 44 | 20 | 1.1 | 10-30-07 | synthetic | CRYSTAL STRUCTURE ANALYSIS OF THE RNA DODECAMER CGC-NF2- AAUUGGCG, WITH AN INCORPORATED 2,4-DIFLUOROTOLUYL RESIDUE (NF2) | F.LI,P.S.PALLAN | 2G92 Compare |
1TUT | 1TUT | AB | 22 | 11 | SOLUTION NMR | 12-28-04 | synthetic,synthetic | J4/5 LOOP FROM THE CANDIDA ALBICANS AND CANDIDA DUBLINIENSIS GROUP I INTRONS | B.M.ZNOSKO,S.D.KENNEDY,P.C.WILLE,T.R.KRUGH,D.H.TURNER | |
1YZ9 | 1YZ9 | CDEF | 44 | 20 | 2.1 | 11-22-05 | synthetic | CRYSTAL STRUCTURE OF RNASE III MUTANT E110Q FROM AQUIFEX AEOLICUS COMPLEXED WITH DOUBLE STRANDED RNA AT 2.1- ANGSTROM RESOLUTION | J.GAN,J.E.TROPEA,B.P.AUSTIN,D.L.COURT,D.S.WAUGH,X.JI | |
1WTS | 1WTS | A | 11 | 5 | SOLUTION NMR | 1-27-99 | synthetic | HELIX 45 (16S RRNA) FROM B. STEAROTHERMOPHILUS, NMR, MINIMIZED AVERAGE STRUCTURE | J.P.RIFE,P.B.MOORE | |
3IBK | 3IBK | AB | 22 | 12 | 2.2 | 5-12-10 | synthetic | CRYSTAL STRUCTURE OF A TELOMERIC RNA QUADRUPLEX | G.W.COLLIE,S.NEIDLE,G.N.PARKINSON | |
3IEV | 3IEV | D | 11 | 0 | 1.9 | 8-25-09 | synthetic | CRYSTAL STRUCTURE OF ERA IN COMPLEX WITH MGGNP AND THE 3' END OF 16S RRNA | C.TU,X.JI | |
2AWQ | 2AWQ | A | 160 | 38 | SOLUTION NMR | 1-17-06 | synthetic | SOLUTION STRUCTURE OF PSEUDOURIDINE-32 MODIFIED ANTICODON STEM-LOOP OF E. COLI TRNAPHE | J.CABELLO-VILLEGAS,E.P.NIKONOWICZ | |
2KRW | 2KRW | A | 176 | 55 | SOLUTION NMR | 12-01-10 | synthetic | SOLUTION STRUCTURE OF THE E COLI TRNA-ARG1 (ACG) CONTAINING THE 2- THIOCYTIDINE MODIFICATION IN POSITION 32 | Y.BILBILLE,P.F.AGRIS | |
2ASB | 2ASB | B | 11 | 0 | 1.5 | 10-11-05 | synthetic | STRUCTURE OF A MYCOBACTERIUM TUBERCULOSIS NUSA-RNA COMPLEX | B.BEUTH,S.PENNELL,K.B.ARNVIG,S.R.MARTIN,I.A.TAYLOR | |
3V74 | 3V74 | B | 11 | 0 | 2.3 | 1-04-12 | CAENORHABDITIS ELEGANS | CRYSTAL STRUCTURE OF FBF-2 IN COMPLEX WITH GLD-1 FBEA13 RNA | Y.WANG,C.QIU,A.KERSHNER,C.P.HOLLEY,D.WILINSKI,S.KELES,J.KIMBLE, M.WICKENS,T.M.T.HALL | |
1K1G | 1K1G | B | 110 | 0 | SOLUTION NMR | 11-07-01 | HOMO SAPIENS | STRUCTURAL BASIS FOR RECOGNITION OF THE INTRON BRANCH SITE RNA BY SPLICING FACTOR 1 | Z.LIU,I.LUYTEN,M.J.BOTTOMLEY,A.C.MESSIAS,S.HOUNGNINOU- MOLANGO,R.SPRANGERS,K.ZANIER,A.KRAMER,M.SATTLER | |
3AVV | 3AVV | GT | 19 | 8 | 3.1 | 1-18-12 | synthetic,synthetic | STRUCTURE OF VIRAL RNA POLYMERASE COMPLEX 3 | D.TAKESHITA,K.TOMITA | |
2JXS | 2JXS | AB | 210 | 100 | SOLUTION NMR | 5-20-08 | synthetic,synthetic | NMR STRUCTURE OF RNA DUPLEX CONTAINING SINGLE ADENOSINE BULGE | L.POPENDA,R.W.ADAMIAK,Z.GDANIEC | |
3AEV | 3AEV | C | 11 | 0 | 2.8 | 4-21-10 | synthetic | CRYSTAL STRUCTURE OF A/EIF2ALPHA-ADIM2P-RRNA COMPLEX FROM PYROCOCCUS HORIKOSHII OT3 | M.TANOKURA,M.Z.JIA,K.NAGATA | |
1LMV | 1LMV | AB | 190 | 86 | SOLUTION NMR | 11-27-02 | SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE | SOLUTION STRUCTURE OF THE UNMODIFIED U2 SNRNA-INTRON BRANCH SITE HELIX FROM S. CEREVISIAE | M.I.NEWBY,N.L.GREENBAUM | |
2JSG | 2JSG | A | 176 | 61 | SOLUTION NMR | 8-07-07 | synthetic | NMR SOLUTION STRUCTURE OF THE ANTICODON OF E.COLI TRNA-VAL3 WITH 1 MODIFICATION (M6A37) | F.A.P.VENDEIX,A.DZIERGOWSKA,E.M.GUSTILO,W.D.GRAHAM,B.SPROAT, A.MALKIEWICZ,P.F.AGRIS | |
3NNH | 3NNH | EF | 20 | 0 | 2.8 | 10-27-10 | HOMO SAPIENS | CRYSTAL STRUCTURE OF THE CUGBP1 RRM1 WITH GUUGUUUUGUUU RNA | M.TEPLOVA,J.SONG,H.GAW,A TEPLOV,D.J.PATEL | |
1FEQ | 1FEQ | A | 176 | 61 | SOLUTION NMR | 11-22-00 | synthetic | NMR SOLUTION STRUCTURE OF THE ANTICODON OF TRNA(LYS3) WITH T6A MODIFICATION AT POSITION 37 | J.W.STUART,Z.GDANIEC,R.H.GUENTHER,M.MARSZALEK,E.SOCHACKA, A.MALKIEWICZ,P.F.AGRIS | |
3HGA | 3HGA | X | 10 | 4 | 1.3 | 8-18-09 | synthetic | CRYSTAL STRUCTURE OF 4-SE-URIDINE DERIVATIZED RNA | JIA SHENG,SOARES ALEXEI,ZHEN HUANG | |
1RRR | 1RRR | AB | 200 | 100 | SOLUTION NMR | 4-22-98 | synthetic,synthetic | RNA DUPLEX CONTAINING A PURINE-RICH STRAND, NMR, 10 STRUCTURES | J.I.GYI,A.N.LANE,G.L.CONN,T.BROWN | 1A34 2E2I 404D 2NVQ 2JA8 2E2H 1OO7 2YU9 1JB8 1PJG 3HOY 1EFO 2JA7 2VUM 3HOV 2NVT 2R7Z 3I4N 1R9S 1SFO 1PJO 1Y1W 2JA6 3HOX 1RRD 1G4Q 2NVZ 3I4M 1R9T 2NVX 3M4O 1Y77 2JA5 Compare |
1DI2 | 1DI2 | CD | 20 | 10 | 1.9 | 12-02-99 | synthetic | CRYSTAL STRUCTURE OF A DSRNA-BINDING DOMAIN COMPLEXED WITH DSRNA: MOLECULAR BASIS OF DOUBLE-STRANDED RNA-PROTEIN INTERACTIONS | J.M.RYTER,S.C.SCHULTZ | 2YKG 3VYX 3VYY 1RC7 3ADL 1FIX Compare |
1MSW | 1MSW | R | 10 | 0 | 2.1 | 11-15-02 | synthetic | STRUCTURAL BASIS FOR THE TRANSITION FROM INITIATION TO ELONGATION TRANSCRIPTION IN T7 RNA POLYMERASE | Y.W.YIN,T.A.STEITZ | |
1XV0 | 1XV0 | AB | 627 | 277 | SOLUTION NMR | 11-09-04 | synthetic,synthetic | SOLUTION NMR STRUCTURE OF RNA INTERNAL LOOP WITH THREE CONSECUTIVE SHEARED GA PAIRS IN 5'GGUGGAGGCU/3'PCCGAAGCCG | G.CHEN,B.M.ZNOSKO,S.D.KENNEDY,T.R.KRUGH,D.H.TURNER | 2DD2 2DD1 2DD3 Compare |
2LBQ | 2LBQ | A | 128 | 51 | SOLUTION NMR | 8-03-11 | BACILLUS SUBTILIS | NMR STRUCTURE OF I6A37_TYRASL | A.P.DENMON,J.WANG,E.P.NIKONOWICZ | |
3R1D | 3R1D | AB | 50 | 18 | 1.4 | 6-01-11 | synthetic | CRYSTAL STRUCTURE OF GC(8BRG)GCGGCGGC DUPLEX | A.KILISZEK,R.KIERZEK,W.J.KRZYZOSIAK,W.RYPNIEWSKI | |
3K49 | 3K49 | B | 30 | 0 | 2.5 | 10-27-09 | synthetic | PUF3 RNA BINDING DOMAIN BOUND TO COX17 RNA 3' UTR RECOGNITION SEQUENCE SITE B | D.ZHU,C.R.STUMPF,J.M.KRAHN,M.WICKENS,T.M.T.HALL | 3K4E Compare |
1F5G | 1F5G | AB | 520 | 260 | SOLUTION NMR | 6-26-00 | synthetic | THE G7(SYN)-G4(ANTI) STRUCTURE OF R(GCAGGCGUGC)2 | M.E.BURKARD,D.H.TURNER | 1F5H Compare |
2JXQ | 2JXQ | AB | 200 | 100 | SOLUTION NMR | 5-20-08 | synthetic,synthetic | NMR STRUCTURE OF RNA DUPLEX | L.POPENDA,R.W.ADAMIAK,Z.GDANIEC | |
3BSX | 3BSX | C | 19 | 0 | 2.3 | 4-08-08 | HOMO SAPIENS | CRYSTAL STRUCTURE OF HUMAN PUMILIO 1 IN COMPLEX WITH PUF5 RNA | Y.K.GUPTA,D.T.NAIR,R.P.WHARTON,A.K.AGGARWAL | |
1M8Y | 1M8Y | C | 20 | 0 | 2.6 | 9-25-02 | synthetic | CRYSTAL STRUCTURE OF THE PUMILIO-HOMOLOGY DOMAIN FROM HUMAN PUMILIO1 IN COMPLEX WITH NRE2-10 RNA | X.WANG,J.MCLACHLAN,P.D.ZAMORE,T.M.T.HALL | 2YJY Compare |
2C0B | 2C0B | R | 10 | 0 | 3.2 | 10-14-05 | synthetic | CATALYTIC DOMAIN OF E. COLI RNASE E IN COMPLEX WITH 13-MER RNA | M.J.MARCAIDA,A.J.CALLAGHAN,W.G.SCOTT,B.F.LUISI | |
3OK4 | 3OK4 | D | 30 | 0 | 1.1 | 11-30-11 | synthetic | CRYSTAL STRUCTURE OF THE ANA:RNA DECAMER SUFFERING FROM LATTICE TRANSLOCATION DEFECTS | M.OVAERE,L.VAN MEERVELT | 3OK2 2KP4 219D 2KP3 2BJ6 Compare |
1DQH | 1DQH | AB | 19 | 9 | 1.7 | 11-13-00 | synthetic,synthetic | CRYSTAL STRUCTURE OF HELIX II OF THE X. LAEVIS SOMATIC 5S RRNA WITH A CYTOSINE BULGE IN TWO CONFORMATIONS | Y.XIONG,M.SUNDARALINGAM | 1DQF Compare |
1IDV | 1IDV | A | 100 | 24 | SOLUTION NMR | 10-05-01 | synthetic | NMR STRUCTURE OF HCV IRES RNA DOMAIN IIIC | K.KALUARACHCHI,R.RIJNBRAND,S.M.LEMON,D.G.GORENSTEIN | |
3R2C | 3R2C | R | 18 | 0 | 1.9 | 6-22-11 | AQUIFEX AEOLICUS | CRYSTAL STRUCTURE OF ANTITERMINATION FACTORS NUSB AND NUSE IN COMPLEX WITH BOXA RNA | J.R.STAGNO,X.JI | |
2G1G | 2G1G | A | 320 | 100 | SOLUTION NMR | 6-20-06 | synthetic | SOLUTION STRUCTURE OF THE ANTICODON LOOP OF S. POMBE TRNAI INCLUDING THE NATURALLY OCCURRING N6-THREONYL ADENINE | E.LESCRINIER | |
3ADI | 3ADI | DE | 20 | 9 | 3.2 | 5-26-10 | synthetic,synthetic | STRUCTURE OF ARABIDOPSIS HYL1 AND ITS MOLECULAR IMPLICATIONS FOR MIRNA PROCESSING | Y.A.YUAN,H.Y.CHEN | |
2BBV | 2BBV | N | 10 | 0 | 2.8 | 8-31-94 | BLACK BEETLE VIRUS | THE REFINED THREE-DIMENSIONAL STRUCTURE OF AN INSECT VIRUS AT 2.8 ANGSTROMS RESOLUTION | J.-P.WERY,V.S.REDDY,M.V.HOSUR,J.E.JOHNSON | |
2R92 | 2R92 | PT | 19 | 8 | 3.8 | 11-27-07 | synthetic,synthetic | ELONGATION COMPLEX OF RNA POLYMERASE II WITH ARTIFICIAL RDRP SCAFFOLD | E.LEHMANN,F.BRUECKNER,P.CRAMER | |
1R4H | 1R4H | A | 10 | 0 | SOLUTION NMR | 10-19-04 | synthetic | NMR SOLUTION STRUCTURE OF THE IIIC DOMAIN OF GB VIRUS B IRES ELEMENT | K.KALUARACHCHI,V.THIVIYANATHAN,R.RIJINBRAND,S.M.LEMON, D.G.GORENSTEIN | |
3V6Y | 3V6Y | B | 10 | 0 | 2.5 | 1-04-12 | CAENORHABDITIS ELEGANS | CRYSTAL STRUCTURE OF FBF-2 IN COMPLEX WITH A MUTANT GLD-1 FBEA13 RNA | C.QIU,A.KERSHNER,Y.WANG,C.H.HOLLEY,D.WILINSKI,S.KELES,J.KIMBLE, M.WICKENS,T.M.T.HALL | |
2LBR | 2LBR | A | 120 | 32 | SOLUTION NMR | 8-03-11 | synthetic | CONFORMATION EFFECTS OF BASE MODIFICATION ON THE ANTICODON STEM-LOOP OF BACILLUS SUBTILIS TRNATYR | A.P.DENMON,J.WANG,E.P.NIKONOWICZ | |
3NJ7 | 3NJ7 | AB | 60 | 24 | 1.9 | 8-25-10 | synthetic | .9 A RESOLUTION X-RAY STRUCTURE OF (GGCAGCAGCC)2 | A.KILISZEK,R.KIERZEK,W.J.KRZYZOSIAK,W.RYPNIEWSKI | |
1LPW | 1LPW | AB | 162 | 76 | SOLUTION NMR | 11-27-02 | SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE | SOLUTION STRUCTURE OF THE YEAST SPLICEOSOMAL U2 SNRNA- INTRON BRANCH SITE HELIX FEATURING A CONSERVED PSEUDOURIDINE | M.I.NEWBY,N.L.GREENBAUM | |
1DRR | 1DRR | B | 100 | 0 | SOLUTION NMR | 4-22-98 | synthetic | DNA/RNA HYBRID DUPLEX CONTAINING A PURINE-RICH DNA STRAND, NMR, 10 STRUCTURES | J.I.GYI,A.N.LANE,G.L.CONN,T.BROWN | |
1FNX | 1FNX | R | 210 | 0 | SOLUTION NMR | 6-24-03 | MUS MUSCULUS | SOLUTION STRUCTURE OF THE HUC RBD1-RBD2 COMPLEXED WITH THE AU-RICH ELEMENT | M.INOUE,M.HIRAO,K.KASASHIMA,I.-S.KIM,G.KAWAI,T.KIGAWA, H.SAKAMOTO,Y.MUTO,S.YOKOYAMA | |
3K5Z | 3K5Z | B | 9 | 0 | 2.4 | 11-03-09 | synthetic | CRYSTAL STRUCTURE OF FBF-2/GLD-1 FBEA G4A MUTANT COMPLEX | Y.WANG,L.OPPERMAN,M.WICKENS,T.M.T.HALL | |
3BSO | 3BSO | PT | 16 | 7 | 1.7 | 1-08-08 | synthetic,synthetic | NORWALK VIRUS POLYMERASE BOUND TO CYTIDINE 5'-TRIPHOSPHATE AND PRIMER-TEMPLATE RNA | D.F.ZAMYATKIN,K.K.S.NG | 3H5X 3H5Y Compare |
479D | 479D | B | 9 | 0 | 1.9 | 5-15-00 | synthetic | CRYSTAL STRUCTURE A DNA:RNA HYBRID DUPLEX, A DYNAMIC MODEL FOR RNASE H RECOGNITION | Y.XIONG,M.SUNDARALINGAM | 2DQP 2DQQ 2DQO Compare |
2L8U | 2L8U | AB | 18 | 8 | SOLUTION NMR | 2-23-11 | synthetic | NMR SPECTROSCOPY AND MOLECULAR DYNAMICS SIMULATION OF R(CCGCUGCGG)2 REVEAL A DYNAMIC UU INTERNAL LOOP FOUND IN MYOTONIC DYSTROPHY TYPE 1 - UU PAIR WITH ONE HYDROGEN BOND PAIR | R.PARKESH,M.A.FOUNTAIN,M.D.DISNEY | |
2VNU | 2VNU | B | 9 | 0 | 2.3 | 4-08-08 | SACCHAROMYCES CEREVISIAE | CRYSTAL STRUCTURE OF SC RRP44 | E.LORENTZEN,J.BASQUIN,E.CONTI | |
2IRN | 2IRN | AB | 270 | 116 | SOLUTION NMR | 2-20-07 | synthetic | THE NMR STRUCTURES OF (RGCUGAGGCU)2 AND (RGCGGAUGCU)2 | B.S.TOLBERT | |
4A93 | 4A93 | P | 9 | 0 | 3.4 | 3-21-12 | SACCHAROMYCES CEREVISIAE | RNA POLYMERASE II ELONGATION COMPLEX CONTAINING A CPD LESION | C.WALMACQ,A.C.M.CHEUNG,M.L.KIREEVA,L.LUBKOWSKA,C.YE,D.GOTTE, J.N.STRATHERN,T.CARELL,P.CRAMER,M.KASHLEV | |
3K5Q | 3K5Q | B | 9 | 0 | 2.2 | 11-03-09 | synthetic | CRYSTAL STRUCTURE OF FBF-2/FBE COMPLEX | Y.WANG,L.OPPERMAN,M.WICKENS,T.M.T.HALL | |
2JRQ | 2JRQ | A | 176 | 56 | SOLUTION NMR | 7-24-07 | synthetic | NMR SOLUTION STRUCTURE OF THE ANTICODON OF E. COLI TRNA- VAL3 WITH 1 MODIFICATION (CMO5U34) | F.A.P.VENDEIX,A.DZIERGOWSKA,E.M.GUSTILO,W.D.GRAHAM,B.SPROAT, A.MALKIEWICZ,P.F.AGRIS | |
1NTT | 1NTT | A | 9 | 0 | SOLUTION NMR | 6-10-03 | synthetic | '(DCPCPUPCPCPUPUP)3':(RAGGAGGAAA)5', WHERE P=PROPYNYL | B.M.ZNOSKO,T.W.BARNES III,T.R.KRUGH,D.H.TURNER | 1NTQ 1NTS Compare |
1OKF | 1OKF | B | 180 | 0 | SOLUTION NMR | 10-09-03 | synthetic | NMR STRUCTURE OF AN ALPHA-L-LNA:RNA HYBRID | J.T.NIELSEN,P.C.STEIN,M.PETERSEN | 1HHW 1HG9 1HHX 1H0Q Compare |
1S77 | 1S77 | R | 9 | 0 | 2.7 | 3-23-04 | synthetic | T7 RNAP PRODUCT PYROPHOSPHATE ELONGATION COMPLEX | Y.W.YIN,T.A.STEITZ | 1S76 Compare |
1RGO | 1RGO | D | 180 | 0 | SOLUTION NMR | 3-02-04 | HOMO SAPIENS | STRUCTURAL BASIS FOR RECOGNITION OF THE MRNA CLASS II AU- RICH ELEMENT BY THE TANDEM ZINC FINGER DOMAIN OF TIS11D | B.P.HUDSON,M.A.MARTINEZ-YAMOUT,H.J.DYSON,P.E.WRIGHT | |
1NAO | 1NAO | A | 9 | 0 | SOLUTION NMR | 1-27-97 | synthetic | SOLUTION STRUCTURE OF AN RNA 2'-O-METHYLATED RNA DUPLEX CONTAINING AN RNA/DNA HYBRID SEGMENT AT THE CENTER, NMR, MINIMIZED AVERAGE STRUCTURE | T.NISHIZAKI,S.IWAI,E.OHTSUKA,H.NAKAMURA | |
1C2Q | 1C2Q | B | 9 | 0 | SOLUTION NMR | 11-29-99 | synthetic | SOLUTION STRUCTURE OF A DNA.RNA HYBRID CONTAINING AN ALPHAT- ANOMERIC THYMIDINE AND POLARITY REVERSALS | M.W.GERMANN,J.M.ARAMINI | 2LAR 2LB4 Compare |
1ZH5 | 1ZH5 | CD | 18 | 4 | 1.9 | 1-17-06 | synthetic | STRUCTURAL BASIS FOR RECOGNITION OF UUUOH 3'-TERMINII OF NASCENT RNA POL III TRANSCRIPTS BY LA AUTOANTIGEN | M.TEPLOVA,Y.R.YUAN,S.ILIN,L.MALININA,A.T.PHAN,A.TEPLOV, D.J.PATEL | 1YTY Compare |
1I6H | 1I6H | R | 9 | 0 | 3.3 | 4-23-01 | synthetic | RNA POLYMERASE II ELONGATION COMPLEX | A.L.GNATT,P.CRAMER,R.D.KORNBERG | |
4DZS | 4DZS | C | 18 | 0 | 3.1 | 4-25-12 | synthetic | CRYSTAL STRUCTURE OF YEAST PUF4P RNA BINDING DOMAIN IN COMPLEX WITH HO-4BE MUTANT RNA | C.QIU,T.M.T HALL | |
1G2E | 1G2E | B | 9 | 1 | 2.3 | 2-05-01 | synthetic | CRYSTAL STRUCTURE OF HUD AND AU-RICH ELEMENT OF THE TUMOR NECROSIS FACTOR ALPHA RNA | X.WANG,T.M.T.HALL | |
2KY2 | 2KY2 | AB | 180 | 80 | SOLUTION NMR | 6-02-10 | synthetic | THE STRUCTURE OF RNA INTERNAL LOOPS WITH TANDEM AG PAIRS: 5'UAGG/3'GGAU | N.B.HAMMOND,S.D.KENNEDY,D.H.TURNER | |
3AVU | 3AVU | GT | 16 | 6 | 2.9 | 1-18-12 | synthetic,synthetic | STRUCTURE OF VIRAL RNA POLYMERASE COMPLEX 2 | D.TAKESHITA,K.TOMITA | |
3K5Y | 3K5Y | B | 9 | 0 | 2.3 | 11-03-09 | synthetic | CRYSTAL STRUCTURE OF FBF-2/GLD-1 FBEA COMPLEX | Y.WANG,L.OPPERMAN,M.WICKENS,T.M.T.HALL | 3QGB Compare |
3K64 | 3K64 | B | 9 | 0 | 2.0 | 11-03-09 | synthetic | CRYSTAL STRUCTURE OF FBF-2/FEM-3 PME COMPLEX | Y.WANG,L.OPPERMAN,M.WICKENS,T.M.T.HALL | |
1YVP | 1YVP | CDG | 21 | 5 | 2.2 | 6-07-05 | synthetic,synthetic | RO AUTOANTIGEN COMPLEXED WITH RNAS | A.J.STEIN,G.FUCHS,C.FU,S.L.WOLIN,K.M.REINISCH | |
3K61 | 3K61 | B | 9 | 0 | 2.2 | 11-03-09 | synthetic | CRYSTAL STRUCTURE OF FBF-2/FOG-1 FBEA COMPLEX | Y.WANG,L.OPPERMAN,M.WICKENS,T.M.T.HALL | |
2KRY | 2KRY | A | 150 | 40 | SOLUTION NMR | 8-18-10 | synthetic | SOLUTION STRUCTURE OF THE HUMAN MITOCHONDRIAL TRNAMET ASL CONTAINING THE 5-FORMYLCYTIDINE MODIFICATION IN POSITION 34 | Y.BILBILLE,P.F.AGRIS | |
3I5X | 3I5X | B | 9 | 0 | 1.9 | 9-08-09 | synthetic | STRUCTURE OF MSS116P BOUND TO SSRNA AND AMP-PNP | M.DEL CAMPO,A.M.LAMBOWITZ | 3I62 3I61 Compare |
2H49 | 2H49 | AB | 360 | 160 | SOLUTION NMR | 11-21-06 | synthetic,synthetic | THE NMR STRUCTURE OF AN INTERNAL LOOP FROM 23S RIBOSOMAL RNA OF DEINOCOCCUS RADIODURANS DIFFERS FROM THE STRUCTURE IN THE CRYSTAL OF THE RIBOSOMAL SUBUNIT | N.SHANKAR | |
4F02 | 4F02 | B | 18 | 0 | 2.0 | 8-08-12 | synthetic | CRYSTAL STRUCTURE OF THE PABP-BINDING SITE OF EIF4G IN COMPLEX WITH RRM1-2 OF PABP AND POLY(A) | N.SAFAEE | |
3GIB | 3GIB | H | 9 | 0 | 2.4 | 11-17-09 | synthetic | CRYSTAL STUCTURE OF THE COMPLEX OF THE E. COLI HFQ WITH POLY(A) | T.M.LINK,P.VALENTIN-HANSEN,R.G.BRENNAN | |
2AO5 | 2AO5 | AB | 36 | 16 | 2.1 | 3-28-06 | synthetic | CRYSTAL STRUCTURE OF AN RNA DUPLEX R(GGCGBRUGCGCU)2 WITH TERMINAL AND INTERNAL TANDEM G-U BASE PAIRS | R.UTSUNOMIYA,K.SUTO,D.BALASUNDARESAN,A.FUKAMIZU,P.K.KUMAR, H.MIZUNO | |
421D | 421D | B | 9 | 0 | 1.8 | 1-05-99 | synthetic | '-D(*TP*TP*CP*TP*TP*(BRO)CP*TP*TP*C)-3', 5'- R(*GP*AP*AP*GP*AP*AP*GP*AP*A)-3' | Y.XIONG,M.SUNDARALINGAM | 2GUN Compare |
2C4R | 2C4R | R | 9 | 0 | 3.6 | 10-25-05 | ESCHERICHIA COLI | CATALYTIC DOMAIN OF E. COLI RNASE E | M.J.MARCAIDA,A.J.CALLAGHAN,B.F.LUISI | |
1MUV | 1MUV | AB | 18 | 8 | SOLUTION NMR | 12-18-02 | synthetic | SHEARED A(ANTI)-A(ANTI) BASE PAIRS IN A DESTABILIZING 2X2 INTERNAL LOOP: THE NMR STRUCTURE OF 5'(RGGCAAGCCU)2 | B.M.ZNOSKO,M.E.BURKARD,S.J.SCHROEDER,T.R.KRUGH,D.H.TURNER | |
4GZY | 4GZY | R | 9 | 0 | 3.5 | 2-13-13 | SYNTHETIC | CRYSTAL STRUCTURES OF BACTERIAL RNA POLYMERASE PAUSED ELONGATION COMPLEXES | A.WEIXLBAUMER,K.LEON,R.LANDICK,S.A.DARST | 4GZZ Compare |
3K62 | 3K62 | B | 9 | 0 | 1.9 | 11-03-09 | synthetic | CRYSTAL STRUCTURE OF FBF-2/GLD-1 FBEB COMPLEX | Y.WANG,L.OPPERMAN,M.WICKENS,T.M.T.HALL | |
2IRO | 2IRO | AB | 270 | 105 | SOLUTION NMR | 2-20-07 | synthetic | THE NMR STRUCTURES OF (RGCUGAGGCU)2 AND (RGCGGAUGCU)2 | B.S.TOLBERT | |
3QGC | 3QGC | B | 9 | 0 | 1.9 | 3-23-11 | synthetic | CRYSTAL STRUCTURE OF FBF-2 R288Y MUTANT IN COMPLEX WITH GLD-1 FBEA A7U MUTANT | Y.WANG,C.QIU,Y.Y.KOH,L.OPPERMAN,L.GROSS,T.M.T.HALL,M.WICKENS | 3QG9 Compare |
3PKM | 3PKM | G | 17 | 0 | 3.1 | 3-09-11 | synthetic,synthetic | CRYSTAL STRUCTURE OF CAS6 WITH ITS SUBSTRATE RNA | R.WANG,G.PREAMPLUME,H.LI | |
2K41 | 2K41 | AB | 170 | 80 | SOLUTION NMR | 11-04-08 | synthetic,synthetic | NMR STRUCTURE OF URIDINE BULGED RNA DUPLEX | L.POPENDA,L.BIELECKI,Z.GDANIEC,R.W.ADAMIAK | |
2KRV | 2KRV | A | 150 | 50 | SOLUTION NMR | 12-01-10 | synthetic | SOLUTION STRUCTURE OF THE E. COLI TRNA-ARG1 (ICG) ASL CONTAINING THE 2-THIOCYTIDINE MODIFICATION | Y.BILBILLE,P.F.AGRIS | |
1CVJ | 1CVJ | M | 59 | 0 | 2.6 | 10-04-99 | synthetic | X-RAY CRYSTAL STRUCTURE OF THE POLY(A)-BINDING PROTEIN IN COMPLEX WITH POLYADENYLATE RNA | R.C.DEO,J.B.BONANNO,N.SONENBERG,S.K.BURLEY | |
2L8W | 2L8W | AB | 18 | 9 | SOLUTION NMR | 2-23-11 | synthetic | R(CCGCUGCGG)2 UU INTERNAL LOOP FOUND IN MYOTONIC DYSTROPHY TYPE 1 - UU PAIR WITH TWO HYDROGEN BOND PAIRS | R.PARKESH,M.FOUNTAIN,M.DISNEY | 2L8C Compare |
1C4L | 1C4L | AB | 18 | 9 | SOLUTION NMR | 8-09-00 | synthetic,synthetic | SOLUTION STRUCTURE OF AN RNA DUPLEX INCLUDING A C-U BASE- PAIR | Y.TANAKA,C.KOJIMA,T.YAMAZAKI,T.S.KODAMA,K.YASUNO, S.MIYASHITA,A.M.ONO,A.S.ONO,M.KAINOSHO,Y.KYOGOKU | |
2B2D | 2B2D | R | 12 | 3 | 2.9 | 5-09-06 | ENTEROBACTERIO PHAGE MS2 | RNA STEMLOOP OPERATOR FROM BACTERIOPHAGE QBETA COMPLEXED WITH AN N87S,E89K MUTANT MS2 CAPSID | W.T.HORN,K.TARS,E.GRAHN,C.HELGSTRAND,A.J.BARON,H.LAGO, C.J.ADAMS,D.S.PEABODY,S.E.V.PHILLIPS,N.J.STONEHOUSE, L.LILJAS,P.G.STOCKLEY | |
2E9Z | 2E9Z | BC | 16 | 4 | 3.0 | 6-26-07 | synthetic,synthetic | FOOT-AND-MOUTH DISEASE VIRUS RNA-POLYMERASE IN COMPLEX WITH A TEMPLATE- PRIMER RNA, ATP AND UTP | C.FERRER-ORTA,A.ARIAS,R.PEREZ-LUQUE,C.ESCARMIS,E.DOMINGO, N.VERDAGUER | |
2E9R | 2E9R | AB | 15 | 6 | 2.8 | 6-26-07 | synthetic,synthetic | FOOT-AND-MOUTH DISEASE VIRUS RNA-DEPENDENT RNA POLYMERASE IN COMPLEX WITH A TEMPLATE-PRIMER RNA AND WITH RIBAVIRIN | C.FERRER-ORTA,A.ARIAS,R.PEREZ-LUQUE,C.ESCARMIS,E.DOMINGO, N.VERDAGUER | |
2K3Z | 2K3Z | AB | 170 | 87 | SOLUTION NMR | 11-04-08 | synthetic,synthetic | NMR STRUCTURE OF ADENOSINE BULGED RNA DUPLEX WITH C:G-A TRIPLE | L.POPENDA,L.BIELECKI,Z.GDANIEC,R.W.ADAMIAK | |
4B3G | 4B3G | GH | 17 | 0 | 2.9 | 9-26-12 | synthetic | CRYSTAL STRUCTURE OF IGHMBP2 HELICASE IN COMPLEX WITH RNA | S.C.LIM,H.SONG | |
3BSB | 3BSB | C | 9 | 0 | 2.8 | 4-08-08 | HOMO SAPIENS | CRYSTAL STRUCTURE OF HUMAN PUMILIO1 IN COMPLEX WITH CYCLINB REVERSE RNA | Y.K.GUPTA,D.T.NAIR,R.P.WHARTON,A.K.AGGARWAL | |
3S17 | 3S17 | R | 9 | 0 | 3.2 | 8-10-11 | synthetic | RNA POLYMERASE II INITIATION COMPLEX WITH A 9-NT RNA | X.LIU,D.A.BUSHNELL,D.A.SILVA,X.HUANG,R.D.KORNBERG | 2E2J Compare |
3BX2 | 3BX2 | C | 18 | 0 | 2.8 | 3-11-08 | SACCHAROMYCES CEREVISIAE | PUF4 RNA BINDING DOMAIN BOUND TO HO ENDONUCLEASE RNA 3' UTR RECOGNITION SEQUENCE | M.T.MILLER,J.J.HIGGIN,T.M.T.HALL | |
3HXM | 3HXM | Y | 9 | 0 | 3.1 | 10-06-09 | synthetic | STRUCTURE OF AN ARGONAUTE COMPLEXED WITH GUIDE DNA AND TARGET RNA DUPLEX CONTAINING TWO MISMATCHES. | Y.WANG,H.LI,G.SHENG,D.J.PATEL | |
2YH1 | 2YH1 | B | 90 | 0 | SOLUTION NMR | 7-20-11 | HOMO SAPIENS | MODEL OF HUMAN U2AF65 TANDEM RRM1 AND RRM2 DOMAINS WITH EIGHT-SITE URIDINE BINDING | C.D.MACKERETH,T.MADL,B.SIMON,K.ZANIER,A.GASCH,M.SATTLER | |
2G91 | 2G91 | AB | 15 | 6 | 1.5 | 4-03-07 | synthetic | CRYSTAL STRUCTURE ANALYSIS OF THE AN RNA NONAMER R(GGUGCGC) D(BRC)R(C) | K.SHI,B.PAN,M.SUNDARALINGAM | |
2KD4 | 2KD4 | AB | 16 | 8 | SOLUTION NMR | 4-07-09 | synthetic | SOLUTION STRUCTURE AND THERMODYNAMICS OF 2',5' RNA INTERCALATION | E.D.HOROWITZ,S.LILAVIVAT,B.W.HOLLADAY,M.W.GERMANN,N.V.HUD | |
2GQ6 | 2GQ6 | KL | 32 | 16 | 1.3 | 6-27-06 | synthetic,synthetic | CRYSTAL STRUCTURE OF AN RNA RACEMATE | W.RYPNIEWSKI,M.VALLAZZA,M.PERBANDT,S.KLUSSMANN,C.BETZEL, V.A.ERDMANN | 2GQ5 2G32 2GQ7 2GQ4 2GPM Compare |
3Q0S | 3Q0S | B | 8 | 0 | 2.0 | 3-16-11 | synthetic | CRYSTAL STRUCTURE OF THE PUMILIO-HOMOLOGY DOMAIN FROM HUMAN PUMILIO2 IN COMPLEX WITH ERK2 NRE | G.LU,T.M.T.HALL | 3Q0N Compare |
3Q0R | 3Q0R | B | 8 | 0 | 2.0 | 3-16-11 | synthetic | CRYSTAL STRUCTURE OF THE PUMILIO-HOMOLOGY DOMAIN FROM HUMAN PUMILIO2 IN COMPLEX WITH P38ALPHA NREB | G.LU,T.M.T.HALL | 3Q0M Compare |
3S16 | 3S16 | R | 8 | 0 | 3.2 | 8-10-11 | synthetic | RNA POLYMERASE II INITIATION COMPLEX WITH AN 8-NT RNA | X.LIU,D.A.BUSHNELL,D.A.SILVA,X.HUANG,R.D.KORNBERG | |
1MV2 | 1MV2 | AB | 16 | 6 | SOLUTION NMR | 12-18-02 | synthetic | THE TANDEM, FACE-TO-FACE AP PAIRS IN 5'(RGGCAPGCCU)2 | B.M.ZNOSKO,M.E.BURKARD,T.R.KRUGH,D.H.TURNER | |
4F1N | 4F1N | E | 16 | 0 | 3.2 | 6-13-12 | VANDERWALTOZYMA POLYSPORA | CRYSTAL STRUCTURE OF KLUYVEROMYCES POLYSPORUS ARGONAUTE WITH A GUIDE RNA | K.NAKANISHI,D.E.WEINBERG,D.P.BARTEL,D.J.PATEL | |
1NXR | 1NXR | B | 144 | 0 | SOLUTION NMR | 7-07-97 | synthetic | HIV-1 POLYPURINE HYBRID, R(GAGGACUG):D(CAGTCCTC), NMR, 18 STRUCTURES | O.Y.FEDOROFF,Y.GE,B.R.REID | |
4EI1 | 4EI1 | B | 8 | 0 | 2.3 | 5-02-12 | HOMO SAPIENS | CRYSTAL STRUCTURE OF HUMAN ARGONAUTE2 | N.T.SCHIRLE,I.J.MACRAE | 4EI3 Compare |
2BGG | 2BGG | PQ | 29 | 10 | 2.2 | 3-31-05 | synthetic,synthetic | THE STRUCTURE OF A PIWI PROTEIN FROM ARCHAEOGLOBUS FULGIDUS COMPLEXED WITH A 16NT SIRNA DUPLEX. | J.S.PARKER,S.M.ROE,D.BARFORD | |
3KNC | 3KNC | B | 8 | 0 | 2.5 | 12-08-10 | synthetic | CRYSTAL STRUCTURE OF THE CENA-RNA HYBRID OCTAMER CE(GCGTAGCG) :R(CGCUACGC) | M.OVAERE,L.VAN MEERVELT | 1EJZ Compare |
3AOI | 3AOI | QSU | 22 | 0 | 4.3 | 12-08-10 | synthetic | RNA POLYMERASE-GFH1 COMPLEX (CRYSTAL TYPE 2) | S.TAGAMI,S.SEKINE,T.KUMAREVEL,M.YAMAMOTO,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | |
3T5Q | 3T5Q | C | 43 | 0 | 3.0 | 1-11-12 | ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI | A STRUCTURE OF LASSA VIRUS NUCLEOPROTEIN IN COMPLEX WITH SSRNA | K.M.HASTIE,T.LIU,L.B.KING,N.NGO,M.A.ZANDONATTI,V.L.WOODS,J.C.DE LA TORRE,E.O.SAPHIRE | |
2XB2 | 2XB2 | E | 15 | 0 | 3.4 | 5-12-10 | HOMO SAPIENS | CRYSTAL STRUCTURE OF THE CORE MAGO-Y14-EIF4AIII-BARENTSZ- UPF3B ASSEMBLY SHOWS HOW THE EJC IS BRIDGED TO THE NMD MACHINERY | G.BUCHWALD,J.EBERT,C.BASQUIN,J.SAULIERE,U.JAYACHANDRAN, F.BONO,H.LE HIR,E.CONTI | |
3Q0Q | 3Q0Q | B | 8 | 0 | 2.0 | 3-16-11 | synthetic | CRYSTAL STRUCTURE OF THE PUMILIO-HOMOLOGY DOMAIN FROM HUMAN PUMILIO2 IN COMPLEX WITH P38ALPHA NREA | G.LU,T.M.T.HALL | 3Q0L Compare |
1FXL | 1FXL | B | 8 | 1 | 1.8 | 2-05-01 | synthetic | CRYSTAL STRUCTURE OF HUD AND AU-RICH ELEMENT OF THE C-FOS RNA | X.WANG,T.M.T.HALL | 4ED5 Compare |
1QET | 1QET | AB | 480 | 240 | SOLUTION NMR | 6-05-97 | synthetic | TANDEM GU MISMATCHES IN RNA, NMR, 30 STRUCTURES | J.A.MCDOWELL,L.HE,X.CHEN,D.H.TURNER | |
3E3J | 3E3J | R | 16 | 0 | 6.7 | 11-04-08 | synthetic | CRYSTAL STRUCTURE OF AN INTERMEDIATE COMPLEX OF T7 RNAP AND 8NT OF RNA | K.J.DURNIAK,S.BAILEY,T.A.STEITZ | |
1MIS | 1MIS | AB | 16 | 8 | SOLUTION NMR | 7-07-97 | synthetic | STRUCTURE OF RNA (5'-R(GP*CP*GP*GP*AP*CP*GP*C)-3') ANTI- PARALLEL RNA DUPLEX WITH TANDEM G:A MISMATCHES, NMR, MINIMIZED AVERAGE STRUCTURE | M.WU,D.H.TURNER | |
3QJP | 3QJP | R | 8 | 0 | 3.3 | 2-08-12 | synthetic | AN RAMP PROTEIN BINDING DIFFERENT RNA SUBSTRATES | R.WANG,H.ZHENG,G.PREAMPLUME,H.LI | |
2E9T | 2E9T | BC | 28 | 12 | 2.6 | 6-26-07 | synthetic,synthetic | FOOT-AND-MOUTH DISEASE VIRUS RNA-POLYMERASE RNA DEPENDENT IN COMPLEX WITH A TEMPLATE-PRIMER RNA AND 5F-UTP | C.FERRER-ORTA,A.ARIAS,R.PEREZ-LUQUE,C.ESCARMIS,E.DOMINGO, N.VERDAGUER | |
8DRH | 8DRH | B | 8 | 0 | SOLUTION NMR | 5-27-98 | synthetic | HIGH RESOLUTION NMR STRUCTURE OF THE D(GCGTCAGG)R(CCUGACGC) HYBRID, MINIMIZED AVERAGE STRUCTURE | M.BACHELIN,G.HESSLER,G.KURZ,J.G.HACIA,P.B.DERVAN,H.KESSLER | 8PSH Compare |
1JZV | 1JZV | ABCD | 30 | 15 | 1.7 | 11-11-03 | synthetic,synthetic | CRYSTAL STRUCTURE OF A BULGED RNA FROM THE SL2 STEM-LOOP OF THE HIV-1 PSI-RNA | Y.XIONG,C.SUDARSANAKUMAR,J.DENG,B.PAN,M.SUNDARALINGAM | |
402D | 402D | AB | 16 | 8 | 2.3 | 6-16-98 | synthetic | '-R(*CP*GP*CP*CP*AP*GP*CP*G)-3' | S.B.JANG,L.-W.HUNG,Y.-I.CHI,E.L.HOLBROOK,R.CARTER, S.R.HOLBROOK | |
3H3V | 3H3V | P | 8 | 0 | 4.0 | 6-16-09 | synthetic | YEAST RNAP II CONTAINING POLY(A)-SIGNAL SEQUENCE IN THE ACTIVE SITE | S.DENGL,P.CRAMER | |
1R3X | 1R3X | C | 80 | 0 | SOLUTION NMR | 5-20-98 | synthetic | INTRAMOLECULAR DNA TRIPLEX WITH RNA THIRD STRAND, NMR, 10 STRUCTURES | C.H.GOTFREDSEN,P.SCHULTZE,J.FEIGON | |
3VNV | 3VNV | GT | 15 | 7 | 2.6 | 8-08-12 | synthetic,synthetic | COMPLEX STRUCTURE OF VIRAL RNA POLYMERASE II | D.TAKESHITA,K.TOMITA | |
3Q0P | 3Q0P | C | 16 | 0 | 2.6 | 3-16-11 | synthetic | CRYSTAL STRUCTURE OF THE PUMILIO-HOMOLOGY DOMAIN FROM HUMAN PUMILIO1 IN COMPLEX WITH HUNCHBACK NRE | G.LU,T.M.T.HALL | |
2OJ8 | 2OJ8 | A | 80 | 30 | SOLUTION NMR | 5-22-07 | synthetic | NMR STRUCTURE OF THE UGUU TETRALOOP OF DUCK EPSILON APICAL STEM LOOP OF THE HEPATITIS B VIRUS | F.C GIRARD,O.M.OTTINK,K.A.M.AMPT,M.TESSARI,S.S.WIJMENGA | |
1GUC | 1GUC | AB | 480 | 240 | SOLUTION NMR | 2-12-97 | synthetic | SOLUTION NMR STRUCTURE OF AN RNA WITH TANDEM, SYMMETRIC GU MISMATCHES, 30 STRUCTURES | J.A.MCDOWELL,D.H.TURNER | |
2IXZ | 2IXZ | A | 96 | 24 | SOLUTION NMR | 9-06-06 | synthetic | SOLUTION STRUCTURE OF THE APICAL STEM-LOOP OF THE HUMAN HEPATITIS B VIRUS ENCAPSIDATION SIGNAL | S.FLODELL,M.PETERSEN,F.GIRARD,J.ZDUNEK,K.KIDD-LJUNGGREN, J.SCHLEUCHER,S.S.WIJMENGA | |
1MV1 | 1MV1 | AB | 16 | 6 | SOLUTION NMR | 12-18-02 | synthetic | THE TANDEM, SHEARED PA PAIRS IN 5'(RGGCPAGCCU)2 | B.M.ZNOSKO,M.E.BURKARD,T.R.KRUGH,D.H.TURNER | |
398D | 398D | AB | 24 | 8 | 1.9 | 10-06-98 | synthetic | '-DNA-RNA-5' JUNCTION FORMED DURING INITIATION OF MINUS- STRAND SYNTHESIS OF HIV REPLICATION | U.MUELLER,G.MEIER,A.MOCHI-ONORI,L.CELLAI,H.HEUMANN | |
1MWG | 1MWG | AB | 16 | 8 | SOLUTION NMR | 3-12-97 | synthetic | STRUCTURE OF RIBONUCLEIC ACID, NMR, MINIMIZED AVERAGE STRUCTURE | M.WU,J.SANTALUCIA,D.H.TURNER | |
472D | 472D | AB | 16 | 8 | 1.9 | 11-27-00 | synthetic,synthetic | STRUCTURE OF AN OCTAMER RNA WITH TANDEM GG/UU MISPAIRS | J.DENG,M.SUNDARALINGAM | |
3RER | 3RER | K | 8 | 0 | 1.7 | 10-19-11 | synthetic | CRYSTAL STRUCTURE OF E. COLI HFQ IN COMPLEX WITH AU6A RNA AND ADP | W.W.WANG,J.H.WU,Y.Y.SHI | |
124D | 124D | B | 8 | 0 | SOLUTION NMR | 10-31-93 | synthetic | STRUCTURE OF A DNA:RNA HYBRID DUPLEX: WHY RNASE H DOES NOT CLEAVE PURE RNA | O.Y.FEDOROFF,M.SALAZAR,B.R.REID | |
3QRP | 3QRP | BC | 14 | 7 | 2.4 | 5-25-11 | synthetic,synthetic | STRUCTURE OF THERMUS THERMOPHILUS CSE3 BOUND TO AN RNA REPRESENTING A PRODUCT MIMIC COMPLEX | M.J.SCHELLENBERG,E.M.GESNER,E.L.GARSIDE,A.M.MACMILLAN | |
3GLP | 3GLP | AB | 40 | 12 | 1.2 | 5-26-09 | synthetic | .23 A RESOLUTION X-RAY STRUCTURE OF (GCUGCUGC)2 | A.KILISZEK,R.KIERZEK,W.J.KRZYZOSIAK,W.RYPNIEWSKI | |
259D | 259D | AB | 16 | 8 | 1.5 | 8-26-96 | synthetic | RNA HYDRATION: A DETAILED LOOK | M.EGLI,S.PORTMANN,N.USMAN | 1RXB Compare |
2OJ7 | 2OJ7 | A | 80 | 21 | SOLUTION NMR | 5-22-07 | synthetic | NMR STRUCTURE OF THE UGUU TETRALOOP OF DUCK EPSILON APICAL STEM LOOP | F.C.GIRARD,O.M.OTTINK,K.A.M.AMPT,M.TESSARI,S.S.WIJMENGA | |
2GBH | 2GBH | A | 75 | 35 | SOLUTION NMR | 4-11-06 | synthetic | NMR STRUCTURE OF STEM REGION OF HELIX-35 OF 23S E.COLI RIBOSOMAL RNA (RESIDUES 736-760) | A.BAX,J.BOISBOUVIER,D.BRYCE,A.GRISHAEV,C.JARONIEC,E.MICLET, E.NIKONOVICZ,E.O'NEIL-CABELLO,J.YING | |
2G3S | 2G3S | AB | 80 | 40 | 1.5 | 1-16-07 | synthetic | RNA STRUCTURE CONTAINING GU BASE PAIRS | S.B.JANG,L.W.HUNG,M.S.JEONG,E.L.HOLBROOK,X.CHEN,D.H.TURNER, S.R.HOLBROOK | |
3I5Y | 3I5Y | B | 8 | 0 | 2.5 | 9-08-09 | synthetic | STRUCTURE OF MSS116P BOUND TO SSRNA CONTAINING A SINGLE 5- BRU AND AMP-PNP | M.DEL CAMPO,A.M.LAMBOWITZ | |
3MJ0 | 3MJ0 | B | 8 | 0 | 2.3 | 5-25-11 | synthetic | CRYSTAL STRUCTURE OF DROSOPHIA AGO-PAZ DOMAIN IN COMPLEX WITH 3'-END 2'-O-METHYLATED RNA | Y.HUANG,L.DING,J.MA | |
1EKD | 1EKD | AB | 16 | 8 | SOLUTION NMR | 11-13-00 | synthetic | NMR AND MOLECULAR MODELING REVEAL THAT DIFFERENT HYDROGEN BONDING PATTERNS ARE POSSIBLE FOR GU PAIRS: ONE HYDROGEN BOND FOR EACH GU PAIR IN R(GGCGUGCC)2 AND TWO FOR EACH GU PAIR IN R(GAGUGCUC)2 | X.CHEN,J.A.MCDOWELL,R.KIERZEK,T.R.KRUGH,D.H.TURNER | |
3BSN | 3BSN | PT | 16 | 6 | 1.8 | 1-08-08 | synthetic,synthetic | NORWALK VIRUS POLYMERASE BOUND TO 5-NITROCYTIDINE TRIPHOSPHATE AND PRIMER-TEMPLATE RNA | D.F.ZAMYATKIN,K.K.S.NG | |
1N35 | 1N35 | BC | 13 | 5 | 2.5 | 12-25-02 | synthetic,synthetic | LAMBDA3 ELONGATION COMPLEX WITH FOUR PHOSPHODIESTER BOND FORMED | Y.TAO,D.L.FARSETTA,M.L.NIBERT,S.C.HARRISON | 1UON Compare |
3F73 | 3F73 | H | 16 | 0 | 3.0 | 12-16-08 | synthetic | ALIGNMENT OF GUIDE-TARGET SEED DUPLEX WITHIN AN ARGONAUTE SILENCING COMPLEX | Y.WANG,H.LI,G.SHENG,S.JURANEK,T.TUSCHL,D.J.PATEL | |
4FVU | 4FVU | BC | 16 | 8 | 2.9 | 9-19-12 | SYNTHETIC CONSTRUCT,SYNTHETIC CONSTRUCT | STRUCTURAL BASIS FOR THE DSRNA SPECIFICITY OF THE LASSA VIRUS NP EXONUCLEASE | K.M HASTIE,L.B.KING,M.A.ZANDONATTI,E.O.SAPHIRE | |
1YFV | 1YFV | AB | 16 | 8 | SOLUTION NMR | 10-15-97 | synthetic | STRUCTURE OF (5'-R(GP*GP*CP*GP*AP*GP*CP*C)-3')2 BY 2-D NMR, 1 STRUCTURE | J.SANTALUCIA JUNIOR,D.H.TURNER | 1SA9 Compare |
3BX3 | 3BX3 | C | 16 | 0 | 3.0 | 3-11-08 | synthetic | PUF4 T650C/C724R MUTANT BOUND TO COX17 RNA 3' UTR RECOGNITION SEQUENCE | M.T.MILLER,J.J.HIGGIN,T.M.T.HALL | |
1ZDJ | 1ZDJ | R | 16 | 4 | 2.9 | 7-08-98 | ENTEROBACTERIO PHAGE MS2 | STRUCTURE OF BACTERIOPHAGE COAT PROTEIN-LOOP RNA COMPLEX | E.GRAHN,N.STONEHOUSE,K.VALEGARD,S.VANDENWORM,L.LILJAS | |
3R1C | 3R1C | CD | 288 | 144 | 2.0 | 6-01-11 | synthetic | CRYSTAL STRUCTURE OF GCGGCGGC DUPLEX | A.KILISZEK,R.KIERZEK,W.J.KRZYZOSIAK,W.RYPNIEWSKI | |
439D | 439D | AB | 16 | 8 | 1.6 | 9-14-01 | synthetic,synthetic | '-R(*CP*UP*GP*GP*GP*CP*GP*G)-3', 5'- R(*CP*CP*GP*CP*CP*UP*GP*G)-3' | M.PERBANDT,S.LORENZ,M.VALLAZZA,V.A.ERDMANN,C.BETZEL | |
1J9H | 1J9H | AB | 32 | 16 | 1.4 | 10-26-01 | synthetic | CRYSTAL STRUCTURE OF AN RNA DUPLEX WITH URIDINE BULGES | Y.XIONG,J.DENG,C.SUDARSANAKUMAR,M.SUNDARALINGAM | |
4FXD | 4FXD | E | 16 | 0 | 3.0 | 2-27-13 | synthetic | CRYSTAL STRUCTURE OF YEAST DNA POLYMERASE ALPHA BOUND TO DNA/RNA | R.L.PERERA,R.TORELLA,S.KLINGE,M.L.KILKENNY,J.D.MAMAN,L.PELLEGRINI | |
438D | 438D | AB | 16 | 8 | 2.5 | 5-12-99 | synthetic | STRUCTURE OF AN RNA DUPLEX R(GGGCGCUCC)2 WITH NON-ADJACENT G.U BASE PAIRS | K.SHI,M.C.WAHL,M.SUNDARALINGAM | |
1BYX | 1BYX | AB | 240 | 61 | SOLUTION NMR | 10-20-99 | synthetic | CHIMERIC HYBRID DUPLEX R(GCAGUGGC).R(GCCA)D(CTGC) COMPRISING THE TRNA-DNA JUNCTION FORMED DURING INITIATION OF HIV-1 REVERSE TRANSCRIPTION | T.SZYPERSKI,M.GOETTE,M.BILLETER,E.PEROLA,L.CELLAI | |
4AM3 | 4AM3 | DEHI | 11 | 0 | 3.0 | 4-18-12 | ESCHERICHIA COLI | CRYSTAL STRUCTURE OF C. CRESCENTUS PNPASE BOUND TO RNA | S.W.HARDWICK,T.GUBBEY,I.HUG,U.JENAL,B.F.LUISI | |
1WNE | 1WNE | BC | 13 | 4 | 3.0 | 8-31-04 | synthetic,synthetic | FOOT AND MOUTH DISEASE VIRUS RNA-DEPENDENT RNA POLYMERASE IN COMPLEX WITH A TEMPLATE-PRIMER RNA | C.FERRER-ORTA,A.ARIAS,R.PEREZ-LUQUE,C.ESCARMIS,E.DOMINGO, N.VERDAGUER | |
1M8W | 1M8W | C | 15 | 0 | 2.2 | 9-25-02 | synthetic,synthetic,synthetic,synthetic | CRYSTAL STRUCTURE OF THE PUMILIO-HOMOLOGY DOMAIN FROM HUMAN PUMILIO1 IN COMPLEX WITH NRE1-19 RNA | X.WANG,J.MCLACHLAN,P.D.ZAMORE,T.M.T.HALL | 1M8X Compare |
1H38 | 1H38 | F | 32 | 0 | 2.9 | 11-20-02 | BACTERIOPHAGE T7 | STRUCTURE OF A T7 RNA POLYMERASE ELONGATION COMPLEX AT 2.9A RESOLUTION | T.H.TAHIROV,D.TEMYAKOV,M.ANIKIN,V.PATLAN,W.T.MCALLISTER, D.G.VASSYLYEV,S.YOKOYAMA | 1S0V Compare |
1EKA | 1EKA | AB | 16 | 8 | SOLUTION NMR | 11-13-00 | synthetic | NMR AND MOLECULAR MODELING REVEAL THAT DIFFERENT HYDROGEN BONDING PATTERNS ARE POSSIBLE FOR GU PAIRS: ONE HYDROGEN BOND FOR EACH GU PAIR IN R(GGCGUGCC)2 AND TWO FOR EACH GU PAIR IN R(GAGUGCUC)2 | X.CHEN,J.A.MCDOWELL,R.KIERZEK,T.R.KRUGH,D.H.TURNER | |
2EC0 | 2EC0 | BC | 30 | 14 | 2.8 | 6-26-07 | synthetic,synthetic | RNA-DEPENDENT RNA POLYMERASE OF FOOT-AND-MOUTH DISEASE VIRUS IN COMPLEX WITH A TEMPLATE-PRIMER RNA AND ATP | C.FERRER-ORTA,A.ARIAS,R.PEREZ-LUQUE,C.ESCARMIS,E.DOMINGO, N.VERDAGUER | |
3EQT | 3EQT | CD | 16 | 8 | 2.0 | 3-10-09 | synthetic | CRYSTAL STRUCTURE OF HUMAN LGP2 C-TERMINAL DOMAIN IN COMPLEX WITH DSRNA | P.LI,X.LI | |
1QES | 1QES | AB | 480 | 240 | SOLUTION NMR | 6-05-97 | synthetic | TANDEM GU MISMATCHES IN RNA, NMR, 30 STRUCTURES | J.A.MCDOWELL,L.HE,X.CHEN,D.H.TURNER | |
165D | 165D | AB | 16 | 8 | 1.6 | 8-31-94 | synthetic | THE STRUCTURE OF A MISPAIRED RNA DOUBLE HELIX AT 1.6 ANGSTROMS RESOLUTION AND IMPLICATIONS FOR THE PREDICTION OF RNA SECONDARY STRUCTURE | W.CRUSE,P.SALUDJIAN,E.BIALA,P.STRAZEWSKI,T.PRANGE,O.KENNARD | |
3L25 | 3L25 | CF | 16 | 8 | 2.0 | 1-26-10 | synthetic | CRYSTAL STRUCTURE OF ZAIRE EBOLA VP35 INTERFERON INHIBITORY DOMAIN BOUND TO 8 BP DSRNA | D.W.LEUNG,K.C.PRINS,D.M.BOREK,M.FARAHBAKHSH,J.M.TUFARIELLO, P.RAMANAN,J.C.NIX,L.A.HELGESON,Z.OTWINOWSKI,R.B.HONZATKO, C.F.BASLER,G.K.AMARASINGHE | |
2CJK | 2CJK | B | 200 | 0 | SOLUTION NMR | 6-28-06 | SACCHAROMYCES CEREVISIAE | STRUCTURE OF THE RNA BINDING DOMAIN OF HRP1 IN COMPLEX WITH RNA | J.M.PEREZ-CANADILLAS | |
2R7W | 2R7W | X | 7 | 0 | 2.6 | 7-29-08 | SIMIAN ROTAVIRUS | CRYSTAL STRUCTURE OF ROTAVIRUS SA11 VP1/RNA (UGUGACC)/MRNA 5'-CAP (M7GPPPG) COMPLEX | X.LU,S.C.HARRISON,Y.J.TAO,J.T.PATTON,M.L.NIBERT | 2R7X 2R7R Compare |
4A3L | 4A3L | P | 7 | 0 | 3.6 | 12-07-11 | SACCHAROMYCES CEREVISIAE | RNA POLYMERASE II INITIAL TRANSCRIBING COMPLEX WITH A 7NT DNA-RNA HYBRID AND SOAKED WITH AMPCPP | A.C.M.CHEUNG,S.SAINSBURY,P.CRAMER | |
435D | 435D | AB | 28 | 14 | 1.4 | 6-14-99 | synthetic,synthetic | '-R(*UP*AP*GP*CP*CP*CP*C)-3', 5'-R(*GP*GP*GP*GP*CP*UP*A)-3' | U.MUELLER,H.SCHUEBEL,M.SPRINZL,U.HEINEMANN | |
1DDL | 1DDL | DE | 9 | 0 | 2.7 | 10-30-00 | synthetic,synthetic | DESMODIUM YELLOW MOTTLE TYMOVIRUS | S.B.LARSON,J.DAY,M.A.CANADY,A.GREENWOOD,A.MCPHERSON | |
1FL8 | 1FL8 | A | 280 | 92 | SOLUTION NMR | 10-16-00 | synthetic | HYPERMODIFIED NUCLEOSIDES IN THE ANTICODON OF TRNALYS STABILIZE A CANONICAL U-TURN STRUCTURE | M.SUNDARAM,P.C.DURANT,D.R.DAVIS | |
2VOD | 2VOD | C | 14 | 0 | 2.1 | 5-06-08 | HOMO SAPIENS | CRYSTAL STRUCTURE OF N-TERMINAL DOMAINS OF HUMAN LA PROTEIN COMPLEXED WITH RNA OLIGOMER AUAUUUU | O.KOTIK-KOGAN,E.R.VALENTINE,D.SANFELICE,M.R.CONTE,S.CURRY | |
2VAL | 2VAL | AC | 28 | 14 | 2.0 | 10-16-07 | ESCHERICHIA COLI,ESCHERICHIA COLI | CRYSTAL STRUCTURE OF AN ESCHERICHIA COLI TRNAGLY MICROHELIX AT 2.0 ANGSTROM RESOLUTION | C.FORSTER,A.B.E.BRAUER,M.PERBANDT,D.LEHMANN,J.P.FURSTE, C.BETZEL,V.A.ERDMANN | |
2V6W | 2V6W | AB | 14 | 7 | 1.8 | 11-06-07 | ESCHERICHIA COLI,ESCHERICHIA COLI | TRNASER ACCEPTOR STEM: CONFORMATION AND HYDRATION OF A MICROHELIX IN A CRYSTAL STRUCTURE AT 1.8 ANGSTROM RESOLUTION | C.FOERSTER,A.B.E.BRAUER,S.BRODE,J.P.FUERSTE,C.BETZEL, V.A.ERDMANN | |
409D | 409D | AB | 42 | 18 | 2.5 | 1-13-99 | synthetic | CRYSTAL STRUCTURE OF AN RNA R(CCCIUGGG) WITH THREE INDEPENDENT DUPLEXES INCORPORATING TANDEM I.U WOBBLES | B.PAN,S.N.MITRA,L.SUN,D.HART,M.SUNDARALINGAM | |
3KMS | 3KMS | BC | 12 | 5 | 2.2 | 7-07-10 | synthetic,synthetic | G62S MUTANT OF FOOT-AND-MOUTH DISEASE VIRUS RNA-POLYMERASE IN COMPLEX WITH A TEMPLATE- PRIMER RNA TRIGONAL STRUCTURE | C.FERRER-ORTA,N.VERDAGUER,R.PEREZ-LUQUE | 4IQX 3KLV 3KNA Compare |
1SAQ | 1SAQ | AB | 14 | 6 | 2.7 | 5-18-04 | synthetic | CRYSTAL STRUCTURE OF THE RNA OCTAMER GIC(GA)GCC | S.B.JANG,K.BAEYENS,M.S.JEONG,J.SANTALUCIA JR,D.TURNER, S.R.HOLBROOK | |
2JLX | 2JLX | D | 14 | 0 | 2.2 | 11-25-08 | synthetic | DENGUE VIRUS 4 NS3 HELICASE IN COMPLEX WITH SSRNA AND ADP- VANADATE | D.H.LUO,T.XU,R.P.WATSON,D.S.BECKER,A.SAMPATH,W.JAHNKE, S.S.YEONG,C.H.WANG,S.P.LIM,S.G.VASUDEVAN,J.LESCAR | 2JLY Compare |
2K65 | 2K65 | AB | 280 | 140 | SOLUTION NMR | 7-14-09 | synthetic,synthetic | NMR SOLUTION STRUCTURE OF THE EXON/INTRON BINDING SITE 1 (EBS1/IBS1) OF THE GROUP II INTRON SC.AI5(GAMMA) | D.KRUSCHEL,R.K.O.SIGEL | |
3S49 | 3S49 | AB | 49 | 18 | 2.3 | 6-29-11 | synthetic | RNA CRYSTAL STRUCTURE WITH 2-SE-URIDINE MODIFICATION | J.SHENG,J.GAN,H.SUN,A.E.H.HASSAN,S.JIANG,Z.HUANG | |
3GVN | 3GVN | AB | 14 | 7 | 1.2 | 7-28-09 | synthetic,synthetic | THE 1.2 ANGSTROEM CRYSTAL STRUCTURE OF AN E.COLI TRNASER ACCEPTOR STEM MICROHELIX REVEALS TWO MAGNESIUM BINDING SITES | A.EICHERT,J.P.FURSTE,A.SCHREIBER,M.PERBANDT,C.BETZEL, V.A.ERDMANN,C.FORSTER | |
4A3K | 4A3K | P | 7 | 0 | 3.5 | 12-07-11 | SYNTHETIC CONSTRUCT | RNA POLYMERASE II INITIAL TRANSCRIBING COMPLEX WITH A 7NT DNA-RNA HYBRID | A.C.M.CHEUNG,S.SAINSBURY,P.CRAMER | |
1WMQ | 1WMQ | C | 14 | 0 | 1.6 | 3-15-05 | synthetic | STRUCTURE OF THE HUTP ANTITERMINATION COMPLEX BOUND TO A SINGLE STRANDED REGION OF HUT MRNA | T.S.KUMAREVEL,H.MIZUNO,P.K.R.KUMAR | 1WRQ Compare |
3S15 | 3S15 | R | 7 | 0 | 3.3 | 8-10-11 | synthetic | RNA POLYMERASE II INITIATION COMPLEX WITH A 7-NT RNA | X.LIU,D.A.BUSHNELL,D.A.SILVA,X.HUANG,R.D.KORNBERG | |
3E2E | 3E2E | R | 7 | 0 | 3.0 | 11-04-08 | synthetic | CRYSTAL STRUCTURE OF AN INTERMEDIATE COMPLEX OF T7 RNAP AND 7NT OF RNA | K.J.DURNIAK,S.BAILEY,T.A.STEITZ | |
2WJ8 | 2WJ8 | a | 140 | 0 | 3.3 | 12-08-09 | ESCHERICHIA COLI | RESPIRATORY SYNCITIAL VIRUS RIBONUCLEOPROTEIN | R.G.TAWAR,S.DUQUERROY,C.VONRHEIN,P.F.VARELA,L.DAMIER-PIOLLE, N.CASTAGNE,K.MACLELLAN,H.BEDOUELLE,G.BRICOGNE,D.BHELLA, J.ELEOUET,F.A.REY | |
1KQ2 | 1KQ2 | R | 7 | 0 | 2.7 | 7-05-02 | synthetic | CRYSTAL STRUCTURE OF AN HFQ-RNA COMPLEX | M.A.SCHUMACHER,R.F.PEARSON,T.MOLLER,P.VALENTIN-HANSEN, R.G.BRENNAN | |
2LI8 | 2LI8 | B | 140 | 0 | SOLUTION NMR | 12-07-11 | synthetic | THE SOLUTION STRUCTURE OF THE LIN28-ZNF DOMAINS BOUND TO AGGAGAU OF PRE-LET-7 MIRNA | F.H.-T.ALLAIN,F.E.LOUGHLIN | |
2ERR | 2ERR | B | 210 | 28 | SOLUTION NMR | 1-10-06 | HOMO SAPIENS | NMR STRUCTURE OF THE RNA BINDING DOMAIN OF HUMAN FOX-1 IN COMPLEX WITH UGCAUGU | F.H.ALLAIN,S.D.AUWETER | |
2M1O | 2M1O | AB | 140 | 60 | SOLUTION NMR | 2-13-13 | synthetic,synthetic | ID3 STEM | M.POPOVIC,N.L.GREENBAUM | |
466D | 466D | AB | 28 | 14 | 1.2 | 8-16-99 | synthetic,synthetic | DISORDER AND TWIN REFINEMENT OF RNA HEPTAMER DOUBLE HELIX | U.MUELLER,Y.A.MULLER,R.HERBST-IRMER,M.SPRINZL,U.HEINEMANN | 434D 464D Compare |
4E58 | 4E58 | CDE | 20 | 5 | 1.9 | 12-12-12 | synthetic | CRYSTAL STRUCTURE OF GCC(LCG)CCGC DUPLEX CONTAINING LNA RESIDUE | A.KILISZEK,R.KIERZEK,W.J.KRZYZOSIAK,R.RYPNIEWSKI | |
2G4B | 2G4B | B | 7 | 0 | 2.5 | 7-25-06 | synthetic | STRUCTURE OF U2AF65 VARIANT WITH POLYURIDINE TRACT | E.A.SICKMIER,C.L.KIELKOPF | |
2XFM | 2XFM | B | 70 | 0 | SOLUTION NMR | 1-26-11 | synthetic | COMPLEX STRUCTURE OF THE MIWI PAZ DOMAIN BOUND TO METHYLATED SINGLE STRANDED RNA | B.SIMON,J.P.KIRKPATRICK,S.ECKHARDT,P.SEHR,M.A.ANDRADE-NAVARRO, R.S.PILLAI,T.CARLOMAGNO | |
1WWF | 1WWF | B | 140 | 0 | SOLUTION NMR | 4-05-05 | MOLONEY MURINE LEUKEMIA VIRUS | NMR STRUCTURE DETERMINED FOR MLV NC COMPLEX WITH RNA SEQUENCE CCUCCGU | A.DEY,D.YORK,A.SMALLS-MANTEY,M.F.SUMMERS | |
3HSB | 3HSB | X | 7 | 0 | 2.2 | 6-23-10 | synthetic | CRYSTAL STRUCTURE OF YMAH (HFQ) FROM BACILLUS SUBTILIS IN COMPLEX WITH AN RNA APTAMER | S.BABA,T.SOMEYA,T.KUMASAKA,G.KAWAI,K.NAKAMURA | |
1WPU | 1WPU | C | 14 | 0 | 1.5 | 8-30-05 | synthetic | CRYSTAL STRUCTURE OF THE HUTP ANTITERMINATION COMPLEX BOUND TO A SINGLE STRANDED REGION OF HUT MRNA | T.S.KUMAREVEL,H.MIZUNO,P.K.R.KUMAR | |
2V7R | 2V7R | AB | 14 | 7 | 1.2 | 3-18-08 | HOMO SAPIENS,HOMO SAPIENS | CRYSTAL STRUCTURE OF A HUMAN TRNAGLY MICROHELIX AT 1.2 ANGSTROM RESOLUTION | C.FOERSTER,M.MANKOWSKA,J.P.FUERSTE,M.PERBANDT,C.BETZEL, V.A.ERDMANN | |
3NL0 | 3NL0 | BC | 13 | 5 | 2.6 | 7-13-11 | synthetic,synthetic | MUTANT P44S M296I OF FOOT-AND-MOUTH DISEASE VIRUS RNA-DEPENDENT RNA POLYMERASE | R.AGUDO,C.FERRER-ORTA,A.ARIAS,R.PEREZ-LUQUE,N.VERDAGUER,E.DOMINGO | |
4E59 | 4E59 | AB | 14 | 4 | 1.5 | 12-12-12 | synthetic | CRYSTAL STRUCTURE OF GCCGCCGC DUPLEX | A.KILISZEK,R.KIERZEK,W.J.KRZYZOSIAK,W.RYPNIEWSKI | |
2XSL | 2XSL | AB | 28 | 14 | 1.6 | 8-10-11 | THERMUS THERMOPHILUS,THERMUS THERMOPHILUS | THE CRYSTAL STRUCTURE OF A THERMUS THERMOPHILUS TRNAGLY ACCEPTOR STEM MICROHELIX AT 1.6 ANGSTROEM RESOLUTION | D.OBERTHUER,A.EICHERT,V.A.ERDMANN,J.P.FUERSTE,C.BETZEL,C.FOERSTER | |
3R1E | 3R1E | AB | 14 | 6 | 1.0 | 6-01-11 | synthetic | CRYSTAL STRUCTURE OF GC(8BRG)GCGGC DUPLEX | A.KILISZEK,R.KIERZEK,W.J.KRZYZOSIAK,W.RYPNIEWSKI | |
3Q0O | 3Q0O | C | 14 | 0 | 2.8 | 3-16-11 | synthetic | CRYSTAL STRUCTURE OF THE PUMILIO-HOMOLOGY DOMAIN FROM HUMAN PUMILIO1 IN COMPLEX WITH ERK2 NRE | G.LU,T.M.T.HALL | |
2PO1 | 2PO1 | C | 7 | 0 | 1.9 | 3-18-08 | synthetic | CRYSTAL STRUCTURE OF THE P. ABYSSI EXOSOME RNASE PH RING COMPLEXED WITH A SINGLE STRANDED 10-MER POLY(A) RNA | M.V.A.S.NAVARRO,B.G.GUIMARAES | |
1WWE | 1WWE | B | 140 | 0 | SOLUTION NMR | 3-22-05 | MOLONEY MURINE LEUKEMIA VIRUS | NMR STRUCTURE DETERMINED FOR MLV NC COMPLEX WITH RNA SEQUENCE UUUUGCU | A.DEY,D.YORK,A.SMALLS-MANTEY,M.F.SUMMERS | |
2R7T | 2R7T | X | 7 | 0 | 3.0 | 7-29-08 | SIMIAN ROTAVIRUS | CRYSTAL STRUCTURE OF ROTAVIRUS SA11 VP1/RNA (UGUGAACC) COMPLEX | X.LU,S.C.HARRISON,Y.J.TAO,J.T.PATTON,M.L.NIBERT | |
2DB3 | 2DB3 | G | 24 | 0 | 2.2 | 5-02-06 | synthetic | STRUCTURAL BASIS FOR RNA UNWINDING BY THE DEAD-BOX PROTEIN DROSOPHILA VASA | T.SENGOKU,O.NUREKI,A.NAKAMURA,S.KOBAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | |
2VUQ | 2VUQ | AB | 14 | 7 | 1.2 | 3-10-09 | HOMO SAPIENS,HOMO SAPIENS | CRYSTAL STRUCTURE OF A HUMAN TRNAGLY ACCEPTOR STEM MICROHELIX (DERIVED FROM THE GENE SEQUENCE DG9990) AT 1.18 ANGSTROEM RESOLUTION | A.EICHERT,M.PERBANDT,A.SCHREIBER,J.P.FUERSTE,C.BETZEL, V.A.ERDMANN,C.FOERSTER | |
2VON | 2VON | C | 14 | 0 | 2.1 | 5-06-08 | HOMO SAPIENS | CRYSTAL STRUCTURE OF N-TERMINAL DOMAINS OF HUMAN LA PROTEIN COMPLEXED WITH RNA OLIGOMER AUAAUUU | O.KOTIK-KOGAN,E.R.VALENTINE,D.SANFELICE,M.R.CONTE,S.CURRY | |
3V71 | 3V71 | B | 7 | 0 | 2.9 | 1-04-12 | CAENORHABDITIS ELEGANS | CRYSTAL STRUCTURE OF PUF-6 IN COMPLEX WITH 5BE13 RNA | C.QIU,A.KERSHNER,Y.WANG,C.H.HOLLEY,D.WILINSKI,S.KELES,J.KIMBLE, M.WICKENS,T.M.T.HALL | |
2A0P | 2A0P | AB | 14 | 6 | 1.9 | 8-16-05 | synthetic | CRYSTAL STRUCTURE OF RNA OLIGOMER CONTAINING 4'-THIORIBOSE | P.HAEBERLI,I.BERGER,P.S.PALLAN,M.EGLI | |
3AOH | 3AOH | Q | 7 | 0 | 4.1 | 12-08-10 | synthetic | RNA POLYMERASE-GFH1 COMPLEX (CRYSTAL TYPE 1) | S.TAGAMI,S.SEKINE,T.KUMAREVEL,M.YAMAMOTO,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | |
3LOB | 3LOB | R | 7 | 0 | 3.6 | 4-21-10 | SPODOPTERA FRUGIPERDA | CRYSTAL STRUCTURE OF FLOCK HOUSE VIRUS CALCIUM MUTANT | J.E.JOHNSON,M.BANERJEE,J.A.SPEIR,R.HUANG | |
2W89 | 2W89 | AB | 28 | 14 | 2.0 | 11-17-09 | ESCHERICHIA COLI,ESCHERICHIA COLI | CRYSTAL STRUCTURE OF THE E.COLI TRNAARG AMINOACYL STEM ISSOACCEPTOR RR-1660 AT 2.0 ANGSTROEM RESOLUTION | A.EICHERT,A.SCHREIBER,J.P.FUERSTE,M.PERBANDT,C.BETZEL, V.A.ERDMANN,C.FOERSTER | |
2JRG | 2JRG | A | 165 | 59 | SOLUTION NMR | 7-24-07 | synthetic | NMR SOLUTION STRUCTURE OF THE ANTICODON OF E. COLI TRNA- VAL3 WITH 2 MODIFICATIONS (CMO5U34 M6A37) | F.A.VENDEIX,A.DZIERGOWSKA,E.M.GUSTILO,W.D.GRAHAM,B.SPROAT, A.MALKIEWICZ,P.F.AGRIS | |
2RQC | 2RQC | B | 120 | 0 | SOLUTION NMR | 8-04-09 | synthetic | SOLUTION STRUCTURE OF RNA-BINDING DOMAIN 3 OF CUGBP1 IN COMPLEX WITH RNA (UG)3 | K.TSUDA,K.KUWASAKO,M.TAKAHASHI,T.SOMEYA,Y.MUTO,M.INOUE, T.KIGAWA,T.TERADA,M.SHIROUZU,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | |
2KFY | 2KFY | B | 120 | 0 | SOLUTION NMR | 6-09-10 | synthetic | NMR STRUCTURE OF THE FIRST QRRM OF HNRNP F IN COMPLEX WITH AGGGAU G- TRACT RNA | F.H.T.ALLAIN,C.DOMINGUEZ | |
2ADC | 2ADC | B | 240 | 1 | SOLUTION NMR | 10-04-05 | HOMO SAPIENS | SOLUTION STRUCTURE OF POLYPYRIMIDINE TRACT BINDING PROTEIN RBD34 COMPLEXED WITH CUCUCU RNA | F.C.OBERSTRASS,S.D.AUWETER,M.ERAT,Y.HARGOUS,A.HENNING, P.WENTER,L.REYMOND,S.PITSCH,D.L.BLACK,F.H.T.ALLAIN | |
2R7S | 2R7S | X | 6 | 0 | 3.2 | 7-29-08 | SIMIAN ROTAVIRUS | CRYSTAL STRUCTURE OF ROTAVIRUS SA11 VP1 / RNA (UGUGCC) COMPLEX | X.LU,S.C.HARRISON,Y.J.TAO,J.T.PATTON,M.L.NIBERT | |
2J0S | 2J0S | E | 6 | 0 | 2.2 | 9-06-06 | HOMO SAPIENS | THE CRYSTAL STRUCTURE OF THE EXON JUNCTION COMPLEX AT 2.2 A RESOLUTION | F.BONO,J.EBERT,E.LORENTZEN,E.CONTI | 2HYI 3EX7 2J0Q Compare |
2KG1 | 2KG1 | B | 120 | 0 | SOLUTION NMR | 6-09-10 | synthetic | STRUCTURE OF THE THIRD QRRM DOMAIN OF HNRNP F IN COMPLEX WITH A AGGGAU G-TRACT RNA | F.H.T.ALLAIN,C.DOMINGUEZ | |
1RAU | 1RAU | ABCD | 24 | 16 | SOLUTION NMR | 1-31-94 | synthetic | SOLUTION STRUCTURE OF AN UNUSUALLY STABLE RNA TETRAPLEX CONTAINING G-AND U-QUARTET STRUCTURES | C.CHEONG,P.B.MOORE | |
3UZT | 3UZT | B | 6 | 0 | 3.5 | 7-11-12 | synthetic | STRUCTURE OF THE C13.18 RNA APTAMER IN COMPLEX WITH G PROTEIN-COUPLED RECEPTOR KINASE 2 | J.J.G.TESMER,V.M.TESMER | |
4H6F | 4H6F | a | 108 | 0 | 3.4 | 11-07-12 | synthetic | CRYSTAL STRUCTURE OF RIFT VALLEY FEVER VIRUS NUCLEOCAPSID PROTEIN HEXAMER BOUND TO SINGLE-STRANDED RNA. THIS ENTRY CONTAINS THREE OUT OF SIX HEXAMERS BOUND TO RNA. | D.D.RAYMOND,J.L.SMITH | 4H6G Compare |
3ULD | 3ULD | B | 6 | 0 | 1.6 | 11-14-12 | synthetic | HIGH RESOLUTION STRUCTURE OF DNA/RNA HYBRID IN COMPLEX WITH RNASE H CATALYTIC DOMAIN D132N MUTANT | J.H.GAN,R.ABDUR,Z.HUANG | 2G8U 3TWH 2G8F 2G8W 2G8I 2G8K 2R7Y 2G8H 2G8V Compare |
2AD9 | 2AD9 | B | 120 | 17 | SOLUTION NMR | 10-04-05 | HOMO SAPIENS | SOLUTION STRUCTURE OF POLYPYRIMIDINE TRACT BINDING PROTEIN RBD1 COMPLEXED WITH CUCUCU RNA | F.C.OBERSTRASS,S.D.AUWETER,M.ERAT,Y.HARGOUS,A.HENNING, P.WENTER,L.REYMOND,S.PITSCH,D.L.BLACK,F.H.T.ALLAIN | |
2LEB | 2LEB | B | 120 | 0 | SOLUTION NMR | 11-23-11 | synthetic | SOLUTION STRUCTURE OF HUMAN SRSF2 (SC35) RRM IN COMPLEX WITH 5'- UCCAGU-3' | G.M.DAUBNER,A.CLERY,S.JAYNE,J.STEVENIN,F.H.-T.ALLAIN | |
1OSU | 1OSU | A | 18 | 6 | 1.4 | 4-04-96 | synthetic | STRUCTURE OF THE RNA HEXAMER, R(UUCGCG), WITH A 5'-UU- OVERHANG EXHIBITING HOOGSTEEN-LIKE TRANS U-U BASE PAIRS | M.C.WAHL,S.T.RAO,M.SUNDARALINGAM | |
1PBM | 1PBM | AB | 12 | 6 | SOLUTION NMR | 7-07-97 | synthetic | STRUCTURE OF RIBONUCLEIC ACID, NMR, 1 STRUCTURE | M.POPENDA,E.BIALA,J.MILECKI,R.W.ADAMIAK | |
3SQW | 3SQW | B | 6 | 0 | 1.9 | 10-12-11 | synthetic | STRUCTURE OF MSS116P (NTE DELETION) BOUND TO SSRNA AND AMP-PNP | M.DEL CAMPO,A.M.LAMBOWITZ | 3SQX Compare |
2GXB | 2GXB | EF | 12 | 6 | 2.2 | 5-01-07 | synthetic | CRYSTAL STRUCTURE OF THE ZA DOMAIN BOUND TO Z-RNA | A.ATHANASIADIS,D.PLACIDO,A.RICH | 1T4X Compare |
3ICE | 3ICE | G | 6 | 0 | 2.8 | 11-10-09 | synthetic | RHO TRANSCRIPTION TERMINATION FACTOR BOUND TO RNA AND ADP- BEF3 | N.D.THOMSEN,J.M.BERGER | |
1J8G | 1J8G | A | 24 | 20 | 0.6 | 11-23-01 | synthetic | X-RAY ANALYSIS OF A RNA TETRAPLEX R(UGGGGU)4 AT ULTRA-HIGH RESOLUTION | J.DENG,Y.XIONG,M.SUNDARALINGAM | |
4A3D | 4A3D | P | 6 | 0 | 3.4 | 12-07-11 | SACCHAROMYCES CEREVISIAE | RNA POLYMERASE II INITIAL TRANSCRIBING COMPLEX WITH A 6NT DNA-RNA HYBRID | A.C.M.CHEUNG,S.SAINSBURY,P.CRAMER | 4A3F Compare |
1WWG | 1WWG | B | 120 | 0 | SOLUTION NMR | 4-05-05 | MOLONEY MURINE LEUKEMIA VIRUS | NMR STRUCTURE DETERMINED FOR MLV NC COMPLEX WITH RNA SEQUENCE UAUCUG | A.DEY,D.YORK,A.SMALLS-MANTEY,M.F.SUMMERS | |
3MDI | 3MDI | C | 6 | 1 | 2.1 | 6-02-10 | synthetic | CRYSTAL STRUCTURE OF THE 25KDA SUBUNIT OF HUMAN CLEAVAGE FACTOR IM IN COMPLEX WITH RNA UGUAAA | Q.YANG,G.M.GILMARTIN,S.DOUBLIE | |
3AHU | 3AHU | X | 6 | 0 | 2.2 | 7-13-11 | synthetic | CRYSTAL STRUCTURE OF YMAH (HFQ) FROM BACILLUS SUBTILIS IN COMPLEX WITH AN RNA APTAMER. | S.BABA,T.SOMEYA,T.KUMASAKA,G.KAWAI,K.NAKAMURA | |
3FHT | 3FHT | C | 12 | 0 | 2.2 | 2-17-09 | synthetic | CRYSTAL STRUCTURE OF HUMAN DBP5 IN COMPLEX WITH AMPPNP AND RNA | H.VON MOELLER,E.CONTI | 3G0H Compare |
2JLW | 2JLW | C | 12 | 0 | 2.6 | 11-25-08 | synthetic | DENGUE VIRUS 4 NS3 HELICASE IN COMPLEX WITH SSRNA2 | D.H.LUO,T.XU,R.P.WATSON,D.S.BECKER,A.SAMPATH,W.JAHNKE, S.S.YEONG,C.H.WANG,S.P.LIM,S.G.VASUDEVAN,J.LESCAR | |
3G9Y | 3G9Y | C | 6 | 1 | 1.4 | 3-03-09 | synthetic | CRYSTAL STRUCTURE OF THE SECOND ZINC FINGER FROM ZRANB2/ZNF265 BOUND TO 6 NT SSRNA SEQUENCE AGGUAA | F.E.LOUGHLIN,A.P.MCGRATH,M.LEE,J.M.GUSS,J.P.MACKAY | |
3VNU | 3VNU | GT | 12 | 5 | 3.2 | 8-08-12 | synthetic,synthetic | COMPLEX STRUCTURE OF VIRAL RNA POLYMERASE I | D.TAKESHITA,K.TOMITA | 4FWT Compare |
2LEC | 2LEC | B | 120 | 0 | SOLUTION NMR | 11-23-11 | synthetic | SOLUTION STRUCTURE OF HUMAN SRSF2 (SC35) RRM IN COMPLEX WITH 5'- UGGAGU-3' | G.M.DAUBNER,A.CLERY,S.JAYNE,J.STEVENIN,F.H.-T.ALLAIN | |
2RRA | 2RRA | B | 120 | 0 | SOLUTION NMR | 4-27-11 | synthetic | SOLUTION STRUCTURE OF RNA BINDING DOMAIN IN HUMAN TRA2 BETA PROTEIN IN COMPLEX WITH RNA (GAAGAA) | K.TSUDA,K.KUWASAKO,M.TAKAHASHI,T.SOMEYA,M.INOUE,T.KIGAWA,T.TERADA, M.SHIROUZU,S.SUGANO,Y.MUTO,S.YOKOYAMA | |
2XZO | 2XZO | D | 6 | 0 | 2.4 | 3-30-11 | SYNTHETIC CONSTRUCT | UPF1 HELICASE - RNA COMPLEX | S.CHAKRABARTI,U.JAYACHANDRAN,F.BONNEAU,F.FIORINI,C.BASQUIN,S.DOMCKE, H.LE HIR,E.CONTI | |
4BBS | 4BBS | P | 6 | 0 | 3.6 | 11-14-12 | SACCHAROMYCES CEREVISIAE | STRUCTURE OF AN INITIALLY TRANSCRIBING RNA POLYMERASE II- TFIIB COMPLEX | S.SAINSBURY,J.NIESSER,P.CRAMER | |
2XS2 | 2XS2 | B | 6 | 1 | 1.4 | 10-05-11 | MUS MUSCULUS | CRYSTAL STRUCTURE OF THE RRM DOMAIN OF MOUSE DELETED IN AZOOSPERMIA-LIKE IN COMPLEX WITH RNA, UUGUUCUU | H.T.JENKINS,T.A.EDWARDS | |
3S14 | 3S14 | R | 6 | 0 | 2.9 | 8-10-11 | synthetic | RNA POLYMERASE II INITIATION COMPLEX WITH A 6-NT RNA | X.LIU,D.A.BUSHNELL,D.A.SILVA,X.HUANG,R.D.KORNBERG | |
3T5N | 3T5N | C | 6 | 0 | 1.8 | 1-11-12 | ESCHERICHIA COLI | .8A CRYSTAL STRUCTURE OF LASSA VIRUS NUCLEOPROTEIN IN COMPLEX WITH SSRNA | K.M.HASTIE,T.LIU,L.B.KING,N.NGO,M.A.ZANDONATTI,V.L.WOODS,J.C.DE LA TORRE,E.O.SAPHIRE | |
1M8V | 1M8V | P | 41 | 0 | 2.6 | 2-11-03 | synthetic | STRUCTURE OF PYROCOCCUS ABYSSII SM PROTEIN IN COMPLEX WITH A URIDINE HEPTAMER | S.THORE,C.MAYER,C.SAUTER,S.WEEKS,D.SUCK | |
1UTD | 1UTD | 8 | 35 | 0 | 2.1 | 1-15-04 | BACILLUS STEAROTHERMOPHILUS | THE STRUCTURE OF THE TRP RAN-BINDING ATTENUATION PROTEIN (TRAP) BOUND TO A 63-NUCLEOTIDE RNA MOLECULE CONTAINING GAGUUU REPEATS | N.H.HOPCROFT,A.MANFREDO,A.L.WENDT,A.M.BRZOZOWSKI,P.GOLLNICK, A.A.ANTSON | |
176D | 176D | B | 60 | 0 | SOLUTION NMR | 11-01-94 | synthetic | NMR SOLUTION STRUCTURE OF A PEPTIDE NUCLEIC ACID COMPLEXED WITH RNA | S.C.BROWN,J.M.VEAL | |
3NNC | 3NNC | B | 6 | 0 | 2.2 | 10-27-10 | HOMO SAPIENS | CRYSTAL STRUCTURE OF CUGBP1 RRM1/2-RNA COMPLEX | M.TEPLOVA,J.SONG,H.GAW,A TEPLOV,D.J.PATEL | |
1AV6 | 1AV6 | B | 6 | 0 | 2.8 | 2-25-98 | engineered | VACCINIA METHYLTRANSFERASE VP39 COMPLEXED WITH M7G CAPPED RNA HEXAMER AND S-ADENOSYLHOMOCYSTEINE | A.E.HODEL,P.D.GERSHON,F.A.QUIOCHO | |
2A8V | 2A8V | DE | 9 | 0 | 2.4 | 4-26-99 | synthetic,ESCHERICHIA COLI | RHO TRANSCRIPTION TERMINATION FACTOR/RNA COMPLEX | C.E.BOGDEN,D.FASS,N.BERGMAN,M.D.NICHOLS,J.M.BERGER | |
2KG0 | 2KG0 | B | 120 | 0 | SOLUTION NMR | 6-09-10 | synthetic | STRUCTURE OF THE SECOND QRRM DOMAIN OF HNRNP F IN COMPLEX WITH A AGGGAU G-TRACT RNA | F.H.T.ALLAIN,C.DOMINGUEZ | |
1I9K | 1I9K | BD | 24 | 3 | SOLUTION NMR | 5-30-01 | synthetic | THE RNA I-MOTIF | K.SNOUSSI,S.NONIN-LECOMTE,J.L.LEROU | |
2KH9 | 2KH9 | B | 60 | 0 | SOLUTION NMR | 3-09-10 | synthetic | SOLUTION STRUCTURE OF YEAST PRP24-RRM2 BOUND TO A FRAGMENT OF U6 RNA | S.A.MARTIN-TUMASZ,S.E.BUTCHER | |
3MDG | 3MDG | C | 6 | 1 | 2.2 | 6-02-10 | synthetic | CRYSTAL STRUCTURE OF THE 25KDA SUBUNIT OF HUMAN CLEAVAGE FACTOR IM IN COMPLEX WITH RNA UUGUAU | Q.YANG,G.M.GILMARTIN,S.DOUBLIE | |
2ADB | 2ADB | B | 120 | 0 | SOLUTION NMR | 10-04-05 | HOMO SAPIENS | SOLUTION STRUCTURE OF POLYPYRIMIDINE TRACT BINDING PROTEIN RBD2 COMPLEXED WITH CUCUCU RNA | F.C.OBERSTRASS,S.D.AUWETER,M.ERAT,Y.HARGOUS,A.HENNING, P.WENTER,L.REYMOND,S.PITSCH,D.L.BLACK,F.H.T.ALLAIN | |
2KXN | 2KXN | A | 72 | 0 | SOLUTION NMR | 3-16-11 | synthetic | NMR STRUCTURE OF HUMAN TRA2BETA1 RRM IN COMPLEX WITH AAGAAC RNA | A.CLERY,S.JAYNE,N.BENDERSKA,C.DOMINGUEZ,S.STAMM,F.H.-T.ALLAIN | |
1WWD | 1WWD | B | 120 | 0 | SOLUTION NMR | 3-22-05 | MOLONEY MURINE LEUKEMIA VIRUS | NMR STRUCTURE DETERMINED FOR MLV NC COMPLEX WITH RNA SEQUENCE AACAGU | A.DEY,D.YORK,A.SMALLS-MANTEY,M.F.SUMMERS | |
1PGL | 1PGL | 3 | 6 | 0 | 2.8 | 11-18-03 | BEAN-POD MOTTLE VIRUS (STRAIN | BEAN POD MOTTLE VIRUS (BPMV), MIDDLE COMPONENT | T.LIN,J.CAVARELLI,J.E.JOHNSON | |
2JLZ | 2JLZ | C | 12 | 0 | 2.2 | 11-25-08 | synthetic | DENGUE VIRUS 4 NS3 HELICASE IN COMPLEX WITH SSRNA AND ADP | D.H.LUO,T.XU,R.P.WATSON,D.S.BECKER,A.SAMPATH,W.JAHNKE, S.S.YEONG,C.H.WANG,S.P.LIM,S.G.VASUDEVAN,J.LESCAR | |
3NNA | 3NNA | B | 5 | 0 | 1.9 | 10-27-10 | HOMO SAPIENS | CRYSTAL STRUCTURE OF CUGBP1 RRM1/2-RNA COMPLEX | M.TEPLOVA,J.SONG,H.GAW,A TEPLOV,D.J.PATEL | |
2Q66 | 2Q66 | X | 5 | 0 | 1.8 | 8-28-07 | synthetic | STRUCTURE OF YEAST POLY(A) POLYMERASE WITH ATP AND OLIGO(A) | A.BOHM,P.BALBO | |
4ALP | 4ALP | E | 5 | 0 | 1.5 | 9-05-12 | SYNTHETIC CONSTRUCT | THE LIN28B COLD SHOCK DOMAIN IN COMPLEX WITH HEXAURIDINE | F.MAYR,A.SCHUETZ,N.DOEGE,U.HEINEMANN | |
3KMQ | 3KMQ | BC | 10 | 5 | 2.1 | 7-07-10 | synthetic,synthetic | G62S MUTANT OF FOOT-AND-MOUTH DISEASE VIRUS RNA-POLYMERASE IN COMPLEX WITH A TEMPLATE- PRIMER RNA, TETRAGONAL STRUCTURE | C.FERRER-ORTA,N.VERDAGUER,R.PEREZ-LUQUE | |
3O8R | 3O8R | C | 5 | 0 | 2.3 | 1-05-11 | synthetic | VISUALIZING ATP-DEPENDENT RNA TRANSLOCATION BY THE NS3 HELICASE FROM HCV | T.C.APPLEBY,J.R.SOMOZA | |
2JLU | 2JLU | C | 10 | 0 | 2.0 | 11-25-08 | synthetic | DENGUE VIRUS 4 NS3 HELICASE IN COMPLEX WITH SSRNA | D.H.LUO,T.XU,R.P.WATSON,D.S.BECKER,A.SAMPATH,W.JAHNKE, S.S.YEONG,C.H.WANG,S.P.LIM,S.G.VASUDEVAN,J.LESCAR | 2JLV Compare |
1N38 | 1N38 | BC | 7 | 2 | 2.8 | 12-25-02 | synthetic,synthetic | REOVIRUS POLYMERASE LAMBDA3 ELONGATION COMPLEX WITH ONE PHOSPHODIESTER BOND FORMED | Y.TAO,D.L.FARSETTA,M.L.NIBERT,S.C.HARRISON | |
1WTT | 1WTT | A | 121 | 55 | SOLUTION NMR | 1-27-99 | synthetic | HELIX 45 (16S RRNA) FROM B. STEAROTHERMOPHILUS, NMR, 11 STRUCTURES | J.P.RIFE,P.B.MOORE | |
3M7N | 3M7N | X | 14 | 0 | 2.4 | 4-28-10 | synthetic | ARCHAEOGLOBUS FULGIDUS EXOSOME WITH RNA BOUND TO THE ACTIVE SITE | S.HARTUNG,K.-P.HOPFNER | |
3O8C | 3O8C | C | 5 | 0 | 2.0 | 1-05-11 | synthetic | VISUALIZING ATP-DEPENDENT RNA TRANSLOCATION BY THE NS3 HELICASE FROM HCV | T.C.APPLEBY,J.R.SOMOZA | |
4B8T | 4B8T | B | 100 | 0 | SOLUTION NMR | 11-07-12 | SYNTHETIC CONSTRUCT | RNA BINDING PROTEIN SOLUTION STRUCTURE OF THE THIRD KH DOMAIN OF KSRP IN COMPLEX WITH THE G-RICH TARGET SEQUENCE. | G.NICASTRO,M.F.GARCIA-MAYORAL,D.HOLLINGWORTH,G.KELLY,S.R.MARTIN, P.BRIATA,R.GHERZI,A.RAMOS | |
3JXR | 3JXR | AB | 10 | 4 | 1.2 | 2-09-10 | synthetic | X-RAY STRUCTURE OF R[CGCG(5-FLUORO)CG]2 | D.A.ADAMIAK,J.MILECKI,R.W.ADAMIAK,W.RYPNIEWSKI | 3JXQ Compare |
3P6Y | 3P6Y | R | 23 | 0 | 2.9 | 11-03-10 | synthetic | CF IM25-CF IM68-UGUAA COMPLEX | H.LI,S.TONG,X.LI,H.SHI,Y.GAO,H.GE,L.NIU,M.TENG | |
1LUU | 1LUU | A | 143 | 44 | SOLUTION NMR | 9-09-03 | synthetic | NMR SOLUTION STRUCTURE OF THE ANTICODON OF YEAST TRNA-PHE WITH 4 MODIFICATIONS (OMC32 OMG34 1MG37 5MC40) | J.W.STUART,K.M.KOSHLAP,R.H.GUENTHER,P.F.AGRIS | 1LUX Compare |
1J6S | 1J6S | A | 20 | 12 | 1.4 | 8-05-03 | synthetic | CRYSTAL STRUCTURE OF AN RNA TETRAPLEX (UGAGGU)4 WITH A- TETRADS, G-TETRADS, U-TETRADS AND G-U OCTADS | B.PAN,Y.XIONG,K.SHI,J.DENG,M.SUNDARALINGAM | |
1UVM | 1UVM | D | 15 | 0 | 2.0 | 2-19-04 | synthetic | THE STRUCTURAL BASIS FOR RNA SPECIFICITY AND CA2 INHIBITION OF AN RNA-DEPENDENT RNA POLYMERASE PHI6P2 WITH 5NT RNA CONFORMATION A | P.S.SALGADO,E.V.MAKEYEV,S.BUTCHER,D.BAMFORD,D.I.STUART, J.M.GRIMES | |
2XGJ | 2XGJ | CD | 10 | 0 | 2.9 | 6-23-10 | synthetic | STRUCTURE OF MTR4, A DEXH HELICASE INVOLVED IN NUCLEAR RNA PROCESSING AND SURVEILLANCE | J.R.WEIR,F.BONNEAU,J.HENTSCHEL,E.CONTI | |
3PEY | 3PEY | B | 5 | 0 | 1.4 | 3-23-11 | synthetic | S. CEREVISIAE DBP5 BOUND TO RNA AND ADP BEF3 | B.MONTPETIT,N.D.THOMSEN,K.J.HELMKE,M.A.SEELIGER,J.M.BERGER,K.WEIS | 3PEW Compare |
3RC8 | 3RC8 | E | 5 | 0 | 2.9 | 5-11-11 | synthetic | HUMAN MITOCHONDRIAL HELICASE SUV3 IN COMPLEX WITH SHORT RNA FRAGMENT | Z.DAUTER,R.JEDRZEJCZAK,M.DAUTER,J.WANG,R.SZCZESNY,P.STEPIEN | |
3S1R | 3S1R | R | 5 | 0 | 3.2 | 8-10-11 | synthetic | RNA POLYMERASE II INITIATION COMPLEX WITH A 5-NT 3'-DEOXY RNA SOAKED WITH GTP | X.LIU,D.A.BUSHNELL,D.A.SILVA,X.HUANG,R.D.KORNBERG | 3S1Q 3RZD 3S2H Compare |
2RS2 | 2RS2 | B | 100 | 0 | SOLUTION NMR | 12-28-11 | synthetic | H, 13C, AND 15N CHEMICAL SHIFT ASSIGNMENTS FOR MUSASHI1 RBD1:R(GUAGU) COMPLEX | T.OHYAMA,T.NAGATA,K.TSUDA,T.IMAI,H.OKANO,T.YAMAZAKI,M.KATAHIRA | |
3NMR | 3NMR | B | 5 | 0 | 1.9 | 10-27-10 | HOMO SAPIENS | CRYSTAL STRUCTURE OF CUGBP1 RRM1/2-RNA COMPLEX | M.TEPLOVA,J.SONG,H.GAW,A TEPLOV,D.J.PATEL | |
2XS5 | 2XS5 | C | 9 | 2 | 1.6 | 10-05-11 | MUS MUSCULUS | CRYSTAL STRUCTURE OF THE RRM DOMAIN OF MOUSE DELETED IN AZOOSPERMIA-LIKE IN COMPLEX WITH MVH RNA, UGUUC | H.T.JENKINS,T.A.EDWARDS | |
3D2S | 3D2S | E | 18 | 0 | 1.7 | 12-02-08 | HOMO SAPIENS | CRYSTAL STRUCTURE OF MBNL1 TANDEM ZINC FINGER 3 AND 4 DOMAIN IN COMPLEX WITH CGCUGU RNA | M.TEPLOVA,D.J.PATEL | |
2JEA | 2JEA | C | 5 | 0 | 2.3 | 4-03-07 | synthetic | STRUCTURE OF A 9-SUBUNIT ARCHAEAL EXOSOME BOUND TO RNA | E.LORENTZEN,E.CONTI | |
2R7V | 2R7V | X | 5 | 0 | 2.8 | 7-29-08 | SIMIAN ROTAVIRUS | CRYSTAL STRUCTURE OF ROTAVIRUS SA11 VP1/RNA (GGCUUU) COMPLEX | X.LU,S.C.HARRISON,Y.J.TAO,J.T.PATTON,M.L.NIBERT | |
3S1N | 3S1N | R | 5 | 0 | 3.1 | 8-10-11 | synthetic | RNA POLYMERASE II INITIATION COMPLEX WITH A 5-NT RNA (VARIANT 2) | X.LIU,D.A.BUSHNELL,D.A.SILVA,X.HUANG,R.D.KORNBERG | |
1UVL | 1UVL | B | 15 | 0 | 2.0 | 2-26-04 | synthetic | THE STRUCTURAL BASIS FOR RNA SPECIFICITY AND CA2 INHIBITION OF AN RNA-DEPENDENT RNA POLYMERASE PHI6P2 WITH 5NT RNA CONFORMATION B | P.S.SALGADO,E.V.MAKEYEV,S.BUTCHER,D.BAMFORD,D.I.STUART, J.M.GRIMES | |
2O32 | 2O32 | A | 280 | 50 | SOLUTION NMR | 2-06-07 | synthetic | SOLUTION STRUCTURE OF U2 SNRNA STEM I FROM HUMAN, CONTAINING MODIFIED NUCLEOTIDES | D.G.SASHITAL,V.VENDITTI,C.G.ANGERS,G.CORNILESCU,S.E.BUTCHER | |
377D | 377D | AB | 20 | 8 | 1.8 | 8-10-98 | synthetic | '-R(*CP*GP*UP*AP*CP*DG)-3' | R.BISWAS,S.N.MITRA,M.SUNDARALINGAM | |
1KOS | 1KOS | A | 120 | 40 | SOLUTION NMR | 10-22-99 | synthetic | SOLUTION NMR STRUCTURE OF AN ANALOG OF THE YEAST TRNA PHE T STEM LOOP CONTAINING RIBOTHYMIDINE AT ITS NATURALLY OCCURRING POSITION | K.M.KOSHLAP,R.GUENTHER,E.SOCHACKA,A.MALKIEWICZ,P.F.AGRIS | |
2VOP | 2VOP | B | 5 | 0 | 2.8 | 5-06-08 | HOMO SAPIENS | CRYSTAL STRUCTURE OF N-TERMINAL DOMAINS OF HUMAN LA PROTEIN COMPLEXED WITH RNA OLIGOMER AUUUU | O.KOTIK-KOGAN,E.R.VALENTINE,D.SANFELICE,M.R.CONTE,S.CURRY | |
1KNZ | 1KNZ | W | 20 | 0 | 2.5 | 1-17-02 | synthetic | RECOGNITION OF THE ROTAVIRUS MRNA 3' CONSENSUS BY AN ASYMMETRIC NSP3 HOMODIMER | R.C.DEO,C.M.GROFT,K.R.RAJASHANKAR,S.K.BURLEY | |
2R7U | 2R7U | X | 5 | 0 | 3.1 | 7-29-08 | SIMIAN ROTAVIRUS | CRYSTAL STRUCTURE OF ROTAVIRUS SA11 VP1/RNA (AAAAGCC) COMPLEX | X.LU,S.C.HARRISON,Y.J.TAO,J.T.PATTON,M.L.NIBERT | |
3KOA | 3KOA | BC | 9 | 3 | 2.4 | 7-07-10 | synthetic,synthetic | M296I MUTANT OF FOOT-AND-MOUTH DISEASE VIRUS RNA-POLYMERASE IN COMPLEX WITH A TEMPLATE- PRIMER RNA AND GTP | C.FERRER-ORTA,N.VERDAGUER,R.PEREZ-LUQUE | |
1P79 | 1P79 | A | 20 | 8 | 1.1 | 11-04-03 | synthetic | CRYSTAL STRUCTURE OF A BULGED RNA TETRAPLEX: IMPLICATIONS FOR A NOVEL BINDING SITE IN RNA TETRAPLEX | B.PAN,Y.XIONG,K.SHI,M.SUNDARALINGAM | |
2KYE | 2KYE | A | 220 | 60 | SOLUTION NMR | 6-30-10 | synthetic | SOLUTION STRUCTURE OF THE PSEUDOURIDINE MODIFIED P6.1 HAIRPIN OF HUMAN TELOMERASE RNA | N.-K.KIM,C.A.THEIMER,J.R.MITCHELL,K.COLLINS,J.FEIGON | |
3PF4 | 3PF4 | R | 5 | 0 | 1.4 | 9-21-11 | synthetic | CRYSTAL STRUCTURE OF BS-CSPB IN COMPLEX WITH R(GUCUUUA) | R.SACHS,K.E.A.MAX,U.HEINEMANN | |
2HT1 | 2HT1 | JKM | 9 | 0 | 3.5 | 11-14-06 | synthetic,synthetic | THE CLOSED RING STRUCTURE OF THE RHO TRANSCRIPTION TERMINATION FACTOR IN COMPLEX WITH NUCLEIC ACID IN THE MOTOR DOMAINS | E.SKORDALAKES,J.M.BERGER | |
3S1M | 3S1M | R | 5 | 0 | 3.1 | 8-10-11 | synthetic | RNA POLYMERASE II INITIATION COMPLEX WITH A 5-NT RNA (VARIANT 1) | X.LIU,D.A.BUSHNELL,D.A.SILVA,X.HUANG,R.D.KORNBERG | |
3Q2T | 3Q2T | E | 10 | 0 | 3.1 | 2-16-11 | synthetic | CRYSTAL STRUCTURE OF CFIM68 RRM/CFIM25/RNA COMPLEX | Q.YANG | |
1YTU | 1YTU | CD | 9 | 4 | 2.5 | 4-05-05 | synthetic,synthetic | STRUCTURAL BASIS FOR 5'-END-SPECIFIC RECOGNITION OF THE GUIDE RNA STRAND BY THE A. FULGIDUS PIWI PROTEIN | J.B.MA,Y.R.YUAN,G.MEISTER,Y.PEI,T.TUSCHL,D.J.PATEL | |
2L5D | 2L5D | B | 100 | 1 | SOLUTION NMR | 4-20-11 | HOMO SAPIENS | SOLUTION STRUCTURES OF HUMAN PIWI-LIKE 1 PAZ DOMAIN WITH SSRNA (5'- PUGACA) | L.ZENG,Q.ZHANG,K.YAN,M.ZHOU | |
2AWE | 2AWE | ABCD | 39 | 24 | 2.1 | 2-07-06 | engineered | BASE-TETRAD SWAPPING RESULTS IN DIMERIZATION OF RNA QUADRUPLEXES: IMPLICATIONS FOR FORMATION OF I-MOTIF RNA OCTAPLEX | B.PAN,K.SHI,M.SUNDARALINGAM | |
3PF5 | 3PF5 | RS | 6 | 0 | 1.7 | 9-21-11 | synthetic | CRYSTAL STRUCTURE OF BS-CSPB IN COMPLEX WITH RU6 | R.SACHS,K.E.A.MAX,U.HEINEMANN | |
3PO3 | 3PO3 | P | 5 | 0 | 3.3 | 3-02-11 | synthetic | ARRESTED RNA POLYMERASE II REACTIVATION INTERMEDIATE | A.C.M.CHEUNG,P.CRAMER | |
2C06 | 2C06 | C | 50 | 0 | SOLUTION NMR | 2-08-06 | synthetic | NMR-BASED MODEL OF THE COMPLEX OF THE TOXIN KID AND A 5- NUCLEOTIDE SUBSTRATE RNA FRAGMENT (AUACA) | M.B.KAMPHUIS,A.M.J.J.BONVIN,M.C.MONTI,M.LEMONNIER, A.MUNOZ-GOMEZ,R.H.H.VAN DEN HEUVEL,R.DIAZ-OREJAS,R.BOELENS | |
3M85 | 3M85 | X | 12 | 0 | 3.0 | 4-28-10 | synthetic | ARCHAEOGLOBUS FULGIDUS EXOSOME Y70A WITH RNA BOUND TO THE ACTIVE SITE | S.HARTUNG,K.-P.HOPFNER | |
2QQP | 2QQP | R | 4 | 0 | 3.8 | 1-20-09 | synthetic | CRYSTAL STRUCTURE OF AUTHENTIC PROVIDENCE VIRUS | J.A.SPEIR,D.J.TAYLOR,J.E.JOHNSON | |
4A3E | 4A3E | P | 4 | 0 | 3.4 | 12-07-11 | SACCHAROMYCES CEREVISIAE | RNA POLYMERASE II INITIAL TRANSCRIBING COMPLEX WITH A 5NT DNA-RNA HYBRID AND SOAKED WITH AMPCPP | A.C.M.CHEUNG,S.SAINSBURY,P.CRAMER | 4A3C 4A3B 4A3M Compare |
3QSU | 3QSU | P | 8 | 0 | 2.2 | 9-12-12 | synthetic | STRUCTURE OF STAPHYLOCOCCUS AUREUS HFQ IN COMPLEX WITH A7 RNA | R.BRENNAN,N.HORSTMANN,T.M.LINK | |
2GRB | 2GRB | EFGH | 32 | 31 | 1.4 | 11-21-06 | synthetic | CRYSTAL STRUCTURE OF AN RNA QUADRUPLEX CONTAINING INOSINE- TETRAD | B.PAN,K.SHI,M.SUNDARALINGAM | |
1UVN | 1UVN | B | 12 | 0 | 3.0 | 2-26-04 | synthetic | THE STRUCTURAL BASIS FOR RNA SPECIFICITY AND CA2 INHIBITION OF AN RNA-DEPENDENT RNA POLYMERASE PHI6P2 CA2+ INHIBITION COMPLEX | P.S.SALGADO,E.V.MAKEYEV,S.BUTCHER,D.BAMFORD,D.I.STUART, J.M.GRIMES | |
4E78 | 4E78 | PT | 7 | 2 | 2.9 | 4-18-12 | synthetic | CRYSTAL STRUCTURE OF A PRODUCT STATE ASSEMBLY OF HCV NS5B GENOTYPE 2A JFH-1 ISOLATE WITH BETA HAIRPIN LOOP DELETION BOUND TO PRIMER- TEMPLATE RNA WITH 3'-DG | T.E.EDWARDS,R.T.MOSLEY | |
1N1H | 1N1H | B | 4 | 0 | 2.8 | 12-25-02 | synthetic | INITIATION COMPLEX OF POLYMERASE LAMBDA3 FROM REOVIRUS | Y.TAO,D.L.FARSETTA,M.L.NIBERT,S.C.HARRISON | |
3P4B | 3P4B | A | 24 | 0 | 1.4 | 1-05-11 | synthetic | ALTERNATINGLY MODIFIED 2'FLUORO RNA OCTAMER F/RA2U2-P3 | P.S.PALLAN,E.M.GREENE,P.A.JICMAN,R.K.PANDEY,M.MANOHARAN,E.ROZNERS, M.EGLI | |
4BA2 | 4BA2 | R | 4 | 0 | 2.5 | 10-03-12 | SULFOLOBUS SOLFATARICUS | ARCHAEAL EXOSOME (RRP4-RRP41(D182A)-RRP42) BOUND TO INORGANIC PHOSPHATE | E.LORENTZEN,E.CONTI | |
1D0T | 1D0T | A | 160 | 60 | SOLUTION NMR | 5-24-00 | synthetic | SOLUTION STRUCTURE OF A PHOSPHOROTHIOATE MODIFIED RNA BINDING SITE FOR PHAGE MS2 COAT PROTEIN | J.S.SMITH,E.P.NIKONOWICZ | |
3IE1 | 3IE1 | EFGH | 14 | 0 | 2.9 | 8-04-09 | synthetic | CRYSTAL STRUCTURE OF H380A MUTANT TTHA0252 FROM THERMUS THERMOPHILUS HB8 COMPLEXED WITH RNA | H.ISHIKAWA,N.NAKAGAWA,S.KURAMITSU,S.YOKOYAMA,R.MASUI,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | |
1CWP | 1CWP | DEF | 10 | 0 | 3.2 | 5-22-95 | COWPEA CHLOROTIC MOTTLE VIRUS,synthetic | STRUCTURES OF THE NATIVE AND SWOLLEN FORMS OF COWPEA CHLOROTIC MOTTLE VIRUS DETERMINED BY X-RAY CRYSTALLOGRAPHY AND CRYO-ELECTRON MICROSCOPY | J.A.SPEIR,J.E.JOHNSON,S.MUNSHI,G.WANG,S.TIMOTHY,T.S.BAKER | |
1ME1 | 1ME1 | A | 80 | 40 | SOLUTION NMR | 8-19-03 | synthetic | CHIMERIC HAIRPIN WITH 2',5'-LINKED RNA LOOP AND RNA STEM | A.Y.DENISOV,R.N.HANNOUSH,K.GEHRING,M.J.DAMHA | |
3S4G | 3S4G | BC | 7 | 3 | 6.0 | 8-03-11 | synthetic,synthetic | LOW RESOLUTION STRUCTURE OF STNV COMPLEXED WITH RNA | S.W.LANE,C.A.DENNIS,C.L.LANE,C.H.TRINH,P.J.RIZKALLAH,P.G.STOCKLEY, S.E.V.PHILLIPS | |
1MV6 | 1MV6 | A | 42 | 0 | SOLUTION NMR | 12-18-02 | synthetic | THE TANDEM, SHEARED PP PAIRS IN 5'(RGGCPPGCCU)2 | B.M.ZNOSKO,M.E.BURKARD,T.R.KRUGH,D.H.TURNER | |
4E6B | 4E6B | EF | 16 | 8 | 1.5 | 7-11-12 | synthetic,synthetic | CRYSTAL STRUCTURE OF STATISTICALLY DISORDERED 19MER DUPLEX P(CGG) 3C(CUG)3 | L.MALININA,A.POPOV,J.TAMJAR | |
3RZO | 3RZO | R | 4 | 0 | 3.0 | 8-10-11 | synthetic | RNA POLYMERASE II INITIATION COMPLEX WITH A 4-NT RNA | X.LIU,D.A.BUSHNELL,D.A.SILVA,X.HUANG,R.D.KORNBERG | |
3AVT | 3AVT | T | 4 | 0 | 2.6 | 1-18-12 | synthetic | STRUCTURE OF VIRAL RNA POLYMERASE COMPLEX 1 | D.TAKESHITA,K.TOMITA | |
1MDG | 1MDG | A | 20 | 16 | 1.5 | 8-12-03 | synthetic | AN ALTERNATING ANTIPARALLEL OCTAPLEX IN AN RNA CRYSTAL STRUCTURE | B.C.PAN,Y.XIONG,K.SHI,M.SUNDARALINGAM | |
1UVI | 1UVI | D | 12 | 0 | 2.1 | 2-19-04 | synthetic | THE STRUCTURAL BASIS FOR RNA SPECIFICITY AND CA2 INHIBITION OF AN RNA-DEPENDENT RNA POLYMERASE PHI6P2 WITH 6NT RNA | P.S.SALGADO,E.V.MAKEYEV,S.BUTCHER,D.BAMFORD,D.I.STUART, J.M.GRIMES | |
2I2Y | 2I2Y | B | 112 | 0 | SOLUTION NMR | 12-12-06 | STREPTOCOCCUS SP. 'GROUP G', HOMO | SOLUTION STRUCTURE OF THE RRM OF SRP20 BOUND TO THE RNA CAUC | Y.F.HARGOUS,F.H.ALLAIN | |
2L41 | 2L41 | B | 80 | 0 | SOLUTION NMR | 11-17-10 | synthetic | NAB3 RRM - UCUU COMPLEX | R.STEFL,R.PERGOLI,F.HOBOR,K.KUBICEK,M.ZIMMERMANN,J.PASULKA,C.HOFR | |
2XS7 | 2XS7 | B | 4 | 1 | 1.4 | 10-05-11 | MUS MUSCULUS | CRYSTAL STRUCTURE OF THE RRM DOMAIN OF MOUSE DELETED IN AZOOSPERMIA-LIKE IN COMPLEX WITH SYCP3 RNA, UUGUUU | H.T.JENKINS,T.A.EDWARDS | |
1NB7 | 1NB7 | EF | 8 | 0 | 2.9 | 3-25-03 | synthetic | HC-J4 RNA POLYMERASE COMPLEXED WITH SHORT RNA TEMPLATE STRAND | D.J.O'FARRELL,R.TROWBRIDGE,D.J.ROWLANDS,J.JAEGER | |
2XC7 | 2XC7 | P | 40 | 0 | SOLUTION NMR | 4-28-10 | synthetic | SOLUTION STRUCTURE OF PHAX-RBD IN COMPLEX WITH SSRNA | A.MOURAO,C.D.MACKERETH,A.VARROT,S.CUSACK,M.SATTLER | |
3P4C | 3P4C | A | 8 | 0 | 1.1 | 1-05-11 | synthetic | ALTERNATINGLY MODIFIED 2'FLUORO RNA OCTAMER F/RA2U2-R32 | P.S.PALLAN,E.M.GREENE,P.A.JICMAN,R.K.PANDEY,M.MANOHARAN,E.ROZNERS, M.EGLI | |
1UVJ | 1UVJ | D | 12 | 0 | 1.9 | 2-19-04 | synthetic | THE STRUCTURAL BASIS FOR RNA SPECIFICITY AND CA2 INHIBITION OF AN RNA-DEPENDENT RNA POLYMERASE PHI6P2 WITH 7NT RNA | P.S.SALGADO,E.V.MAKEYEV,S.BUTCHER,D.BAMFORD,D.I.STUART, J.M.GRIMES | |
1G3A | 1G3A | AB | 8 | 2 | SOLUTION NMR | 8-01-01 | synthetic | STRUCTURE OF RNA DUPLEXES (CIGCGICG)2 | X.CHEN,R.KIERZEK,D.H.TURNER | |
3S2D | 3S2D | R | 4 | 0 | 3.2 | 8-10-11 | synthetic | RNA POLYMERASE II INITIATION COMPLEX WITH A 5-NT RNA CONTAINING A 5BR- U | X.LIU,D.A.BUSHNELL,D.A.SILVA,X.HUANG,R.D.KORNBERG | |
3P4D | 3P4D | A | 8 | 0 | 1.9 | 1-05-11 | synthetic | ALTERNATINGLY MODIFIED 2'FLUORO RNA OCTAMER F/RC4G4 | P.S.PALLAN,E.M.GREENE,P.A.JICMAN,R.K.PANDEY,M.MANOHARAN,E.ROZNERS, M.EGLI | |
2VRT | 2VRT | EFGH | 10 | 0 | 3.5 | 7-22-08 | ESCHERICHIA COLI,ESCHERICHIA COLI | CRYSTAL STRUCTURE OF E. COLI RNASE E POSSESSING M1 RNA FRAGMENTS - CATALYTIC DOMAIN | D.J.KOSLOVER,A.J.CALLAGHAN,M.J.MARCAIDA,E.F.GARMAN, M.MARTICK,W.G.SCOTT,B.F.LUISI | |
2TMV | 2TMV | R | 3 | 0 | 2.9 | 1-09-89 | synthetic | VISUALIZATION OF PROTEIN-NUCLEIC ACID INTERACTIONS IN A VIRUS. REFINED STRUCTURE OF INTACT TOBACCO MOSAIC VIRUS AT 2.9 ANGSTROMS RESOLUTION BY X-RAY FIBER DIFFRACTION | G.STUBBS,R.PATTANAYEK,K.NAMBA | 1CGM 2OM3 2XEA Compare |
4HOR | 4HOR | X | 3 | 0 | 1.9 | 1-23-13 | synthetic | CRYSTAL STRUCTURE OF FULL-LENGTH HUMAN IFIT5 WITH 5`-TRIPHOSPHATE OLIGOCYTIDINE | Y.M.ABBAS,A.PICHLMAIR,M.W.GORNA,G.SUPERTI-FURGA,B.NAGAR | |
1UTF | 1UTF | 0 | 25 | 0 | 1.9 | 1-15-04 | BACILLUS STEAROTHERMOPHILUS | THE STRUCTURE OF THE TRP RNA-BINDING ATTENUATION PROTEIN (TRAP) BOUND TO A RNA MOLECULE CONTAINING UAGAU REPEATS (PART I) | N.H.HOPCROFT,A.MANFREDO,A.L.WENDT,A.M.BRZOZOWSKI,P.GOLLNICK, A.A.ANTSON | 1UTV Compare |
3B0U | 3B0U | A | 6 | 0 | 1.9 | 12-14-11 | THERMUS THERMOPHILUS | TRNA-DIHYDROURIDINE SYNTHASE FROM THERMUS THERMOPHILUS IN COMPLEX WITH TRNA FRAGMENT | F.YU,Y.TANAKA,K.YAMASHITA,A.NAKAMURA,M.YAO,I.TANAKA | |
2FZ2 | 2FZ2 | D | 3 | 0 | 2.9 | 2-21-06 | TURNIP YELLOW MOSAIC VIRUS | STRUCTURE OF TURNIP YELLOW MOSAIC VIRUS AT 100 K | S.B.LARSON,R.W.LUCAS,A.MCPHERSON | 2XPJ Compare |
1RMV | 1RMV | B | 3 | 0 | 2.9 | 5-15-97 | RIBGRASS MOSAIC VIRUS | RIBGRASS MOSAIC VIRUS, FIBER DIFFRACTION | H.WANG,G.STUBBS | |
2A1R | 2A1R | C | 6 | 0 | 2.6 | 12-20-05 | synthetic | CRYSTAL STRUCTURE OF PARN NUCLEASE DOMAIN | M.WU,H.SONG | |
2O83 | 2O83 | AB | 252 | 108 | SOLUTION NMR | 7-10-07 | synthetic | THE STRUCTURE OF TANDEM GA RNA PAIRS WHEN FLANKING PAIRS ARE ISOG-ISOC PAIRS | S.D.KENNEDY,D.H.TURNER | |
4DWA | 4DWA | D | 3 | 0 | 3.0 | 5-23-12 | synthetic | CRYSTAL STRUCTURE OF AN ACTIVE-SITE MUTANT OF THE GLYCOPROTEIN ERNS FROM THE PESTIVIRUS BVDV-1 IN COMPLEX WITH A CPUPC TRINUCLEOTIDE | T.KREY,F.BONTEMS,C.VONRHEIN,M.-C.VANEY,G.BRICOGNE,T.RUEMENAPF,F.A.REY | |
2XNR | 2XNR | C | 3 | 0 | 1.6 | 9-08-10 | SACCHAROMYCES CEREVISIAE | STRUCTURAL INSIGHTS INTO CIS ELEMENT RECOGNITION OF NON- POLYADENYLATED RNAS BY THE NAB3-RRM | B.M.LUNDE,M.HORNER,A.MEINHART | |
1H2C | 1H2C | R | 3 | 0 | 1.6 | 4-10-03 | ESCHERICHIA COLI | EBOLA VIRUS MATRIX PROTEIN VP40 N-TERMINAL DOMAIN IN COMPLEX WITH RNA (HIGH-RESOLUTION VP40[55-194] VARIANT). | F.X.GOMIS-RUTH,A.DESSEN,A.BRACHER,H.D.KLENK,W.WEISSENHORN | 1H2D Compare |
1I5L | 1I5L | U | 6 | 0 | 2.8 | 8-28-01 | synthetic | CRYSTAL STRUCTURE OF AN SM-LIKE PROTEIN (AF-SM1) FROM ARCHAEOGLOBUS FULGIDUS COMPLEXED WITH SHORT POLY-U RNA | I.TORO,S.THORE,C.MAYER,J.BASQUIN,B.SERAPHIN,D.SUCK | |
2VOO | 2VOO | C | 6 | 0 | 1.8 | 5-06-08 | HOMO SAPIENS | CRYSTAL STRUCTURE OF N-TERMINAL DOMAINS OF HUMAN LA PROTEIN COMPLEXED WITH RNA OLIGOMER UUUUUUUU | O.KOTIK-KOGAN,E.R.VALENTINE,D.SANFELICE,M.R.CONTE,S.CURRY | |
2O81 | 2O81 | AB | 252 | 82 | SOLUTION NMR | 7-10-07 | synthetic | THE STRUCTURE OF TANDEM GA RNA PAIRS WHEN FLANKING PAIRS ARE ISOG-ISOC PAIRS | G.CHEN,D.H.TURNER | |
3PDM | 3PDM | R | 3 | 0 | 3.5 | 1-12-11 | synthetic | HIBISCUS LATENT SINGAPORE | S.K.TEWARY,S.M.WONG,K.SWAMINATHAN | |
3NMA | 3NMA | BC | 5 | 1 | 2.6 | 5-25-11 | synthetic,synthetic | MUTANT P169S OF FOOT-AND-MOUTH DISEASE VIRUS RNA DEPENDENT RNA- POLYMERASE | R.AGUDO,C.FERRER-ORTA,A.ARIAS,R.PEREZ-LUQUE,N.VERDAGUER,E.DOMINGO | |
1VTM | 1VTM | R | 3 | 0 | 3.5 | 7-31-94 | synthetic | STRUCTURE OF THE U2 STRAIN OF TOBACCO MOSAIC VIRUS REFINED AT 3.5 ANGSTROMS RESOLUTION USING X-RAY FIBER DIFFRACTION | G.STUBBS,R.PATTANAYEK | |
4HOT | 4HOT | X | 3 | 0 | 2.5 | 1-23-13 | synthetic | CRYSTAL STRUCTURE OF FULL-LENGTH HUMAN IFIT5 WITH 5`-TRIPHOSPHATE OLIGOADENINE | Y.M.ABBAS,A.PICHLMAIR,M.W.GORNA,G.SUPERTI-FURGA,B.NAGAR | |
1LAJ | 1LAJ | R | 3 | 0 | 3.4 | 11-27-02 | TOMATO ASPERMY VIRUS | THE STRUCTURE OF TOMATO ASPERMY VIRUS BY X-RAY CRYSTALLOGRAPHY | R.W.LUCAS,S.B.LARSON,M.A.CANADY,A.MCPHERSON | |
3J06 | 3J06 | R | 3 | 0 | 2.8 | 6-01-11 | TOBACCO MOSAIC VIRUS | CRYOEM HELICAL RECONSTRUCTION OF TMV | P.GE,Z.H.ZHOU | |
3RTJ | 3RTJ | D | 2 | 0 | 3.0 | 8-31-11 | synthetic | CRYSTAL STRUCTURE OF RICIN BOUND WITH DINUCLEOTIDE APG | A.F.MONZINGO,J.D.ROBERTUS | |
3U2E | 3U2E | CD | 4 | 0 | 2.3 | 10-12-11 | synthetic | EAL DOMAIN FROM CAULOBACTER CRESCENTUS IN COMPLEX WITH 5'-PGPG AND MG++ | E.V.FILIPPOVA,G.MINASOV,L.SHUVALOVA,O.KIRYUKHINA,C.MASSA,T.SCHIRMER, A.JOACHIMIAK,W.F.ANDERSON,MIDWEST CENTER FOR STRUCTURAL GENOMICS (MCSG) | |
1PVO | 1PVO | GHJKL | 10 | 0 | 3.0 | 7-22-03 | synthetic | X-RAY CRYSTAL STRUCTURE OF RHO TRANSCRIPTION TERMINATION FACTOR IN COMPLEX WITH SSRNA SUBSTRATE AND ANPPNP | E.SKORDALAKES,J.M.BERGER | |
4AFY | 4AFY | CD | 4 | 0 | 2.0 | 1-09-13 | synthetic | CRYSTAL STRUCTURE OF THE FIMX EAL DOMAIN IN COMPLEX WITH REACTION PRODUCT PGPG | J.ROBERT-PAGANIN,S.NONIN-LECOMTE,S.RETY | |
1XPR | 1XPR | GHJKLM | 12 | 0 | 3.1 | 11-02-04 | synthetic | STRUCTURAL MECHANISM OF INHIBITION OF THE RHO TRANSCRIPTION TERMINATION FACTOR BY THE ANTIBIOTIC 5A-FORMYLBICYCLOMYCIN (FB) | E.SKORDALAKES,A.P.BROGAN,B.S.PARK,H.KOHN,J.M.BERGER | |
1XPU | 1XPU | GHJKLM | 12 | 0 | 3.0 | 11-02-04 | synthetic | STRUCTURAL MECHANISM OF INHIBITION OF THE RHO TRANSCRIPTION TERMINATION FACTOR BY THE ANTIBIOTIC 5A-(3- FORMYLPHENYLSULFANYL)-DIHYDROBICYCLOMYCIN (FPDB) | E.SKORDALAKES,A.P.BROGAN,B.S.PARK,H.KOHN,J.M.BERGER | |
2X1F | 2X1F | B | 2 | 0 | 1.6 | 2-02-10 | synthetic | STRUCTURE OF RNA15 RRM WITH BOUND RNA (GU) | C.PANCEVAC,D.C.GOLDSTONE,A.RAMOS,I.A.TAYLOR | |
4G0A | 4G0A | EFGH | 8 | 0 | 2.1 | 8-22-12 | SYNTHETIC CONSTRUCT | CRYSTALLOGRAPHIC ANALYSIS OF ROTAVIRUS NSP2-RNA COMPLEX REVEALS SPECIFIC RECOGNITION OF 5'-GG SEQUENCE FOR RTPASE ACTIVITY | L.HU,B.V.V.PRASAD | |
1XPO | 1XPO | GHJKLM | 12 | 0 | 3.1 | 2-08-05 | synthetic | STRUCTURAL MECHANISM OF INHIBITION OF THE RHO TRANSCRIPTION TERMINATION FACTOR BY THE ANTIBIOTIC BICYCLOMYCIN | E.SKORDALAKES,A.P.BROGAN,B.S.PARK,H.KOHN,J.M.BERGER | |
4G7O | 4G7O | IS | 4 | 0 | 3.0 | 10-31-12 | synthetic | CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS TRANSCRIPTION INITIATION COMPLEX CONTAINING 2 NT OF RNA | Y.ZHANG,R.H.EBRIGHT | |
3ERC | 3ERC | EFGI | 8 | 0 | 3.2 | 6-16-09 | synthetic,synthetic,synthetic | CRYSTAL STRUCTURE OF THE HETERODIMERIC VACCINIA VIRUS MRNA POLYADENYLATE POLYMERASE WITH THREE FRAGMENTS OF RNA AND 3'-DEOXY ATP | C.LI,H LI,S.ZHOU,T.L.POULOS,P.D.GERSHON | |
3ER9 | 3ER9 | D | 2 | 0 | 2.1 | 6-16-09 | synthetic | CRYSTAL STRUCTURE OF THE HETERODIMERIC VACCINIA VIRUS MRNA POLYADENYLATE POLYMERASE COMPLEX WITH UU AND 3'-DEOXY ATP | C.LI,H LI,S.ZHOU,T.L.POULOS,P.D.GERSHON | |
4A3J | 4A3J | P | 2 | 0 | 3.7 | 12-07-11 | SYNTHETIC CONSTRUCT | RNA POLYMERASE II INITIAL TRANSCRIBING COMPLEX WITH A 2NT DNA-RNA HYBRID AND SOAKED WITH GMPCPP | A.C.M.CHEUNG,S.SAINSBURY,P.CRAMER | |
4A3G | 4A3G | P | 2 | 0 | 3.5 | 2-08-12 | SACCHAROMYCES CEREVISIAE | RNA POLYMERASE II INITIAL TRANSCRIBING COMPLEX WITH A 2NT DNA-RNA HYBRID | A.C.M.CHEUNG,S.SAINSBURY,P.CRAMER | |
4HOS | 4HOS | X | 2 | 0 | 2.0 | 1-23-13 | synthetic | CRYSTAL STRUCTURE OF FULL-LENGTH HUMAN IFIT5 WITH 5`-TRIPHOSPHATE OLIGOURIDINE | Y.M.ABBAS,A.PICHLMAIR,M.W.GORNA,G.SUPERTI-FURGA,B.NAGAR | |
3GPQ | 3GPQ | EF | 3 | 0 | 2.0 | 7-21-09 | synthetic | CRYSTAL STRUCTURE OF MACRO DOMAIN OF CHIKUNGUNYA VIRUS IN COMPLEX WITH RNA | H.MALET,S.JAMAL,B.COUTARD,B.CANARD | |
1T2R | 1T2R | B | 20 | 0 | SOLUTION NMR | 6-01-04 | DROSOPHILA MELANOGASTER | STRUCTURAL BASIS FOR 3' END RECOGNITION OF NUCLEIC ACIDS BY THE DROSOPHILA ARGONAUTE 2 PAZ DOMAIN | A.LINGEL,B.SIMON,E.IZAURRALDE,M.SATTLER | |
1QLN | 1QLN | R | 2 | 0 | 2.4 | 2-04-00 | BACTERIOPHAGE T7 | STRUCTURE OF A TRANSCRIBING T7 RNA POLYMERASE INITIATION COMPLEX | G.M.T.CHEETHAM,T.A.STEITZ | |
2X1A | 2X1A | B | 1 | 0 | 2.0 | 2-02-10 | synthetic | STRUCTURE OF RNA15 RRM WITH RNA BOUND (G) | C.PANCEVAC,D.C.GOLDSTONE,A.RAMOS,I.A.TAYLOR | |
1B2M | 1B2M | CDE | 3 | 0 | 2.0 | 3-25-99 | synthetic | THREE-DIMENSIONAL STRUCTURE OF RIBONULCEASE T1 COMPLEXED WITH AN ISOSTERIC PHOSPHONATE ANALOGUE OF GPU: ALTERNATE SUBSTRATE BINDING MODES AND CATALYSIS. | R.K.ARNI,L.WATANABE,R.J.WARD,R.J.KREITMAN,K.KUMAR,F.G.WALZ JR. | |
1UVK | 1UVK | BDF | 3 | 0 | 2.5 | 2-19-04 | synthetic | THE STRUCTURAL BASIS FOR RNA SPECIFICITY AND CA2 INHIBITION OF AN RNA-DEPENDENT RNA POLYMERASE PHI6P2 DEAD-END COMPLEX | P.S.SALGADO,E.V.MAKEYEV,S.BUTCHER,D.BAMFORD,D.I.STUART, J.M.GRIMES | |
3T3O | 3T3O | B | 1 | 0 | 2.5 | 10-19-11 | synthetic | MOLECULAR BASIS FOR THE RECOGNITION AND CLEAVAGE OF RNA (CUGG) BY THE BIFUNCTIONAL 5'-3' EXO/ENDORIBONUCLEASE RNASE J | A.DORLEANS,I.LI DE LA SIERRA-GALLAY,J.PITON,L.ZIG,L.GILET,H.PUTZER, C.CONDON | |