3D structure

PDB id
4TV0 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Drosophila stem-loop binding protein complexed with histone mRNA stem-loop, Selenomethionine derivative
Experimental method
X-RAY DIFFRACTION
Resolution
2.6 Å

Loop

Sequence
UUUUCA
Length
6 nucleotides
Bulged bases (A, C, G, U)
15U, 17C
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_27353.2
Basepair signature
cWW
Number of instances in this motif group
7

Unit IDs

4TV0|1|B|U|13
4TV0|1|B|U|14
4TV0|1|B|U|15
4TV0|1|B|U|16
4TV0|1|B|C|17
4TV0|1|B|A|18

Current chains

Chain B
RNA (26-MER)

Nearby chains

Chain A
Histone RNA hairpin-binding protein

Coloring options:

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