3D structure

PDB id
4V9F (explore in PDB, NAKB, or RNA 3D Hub)
Description
The re-refined crystal structure of the Haloarcula marismortui large ribosomal subunit at 2.4 Angstrom resolution: more complete structure of the L7/L12 and L1 stalk, L5 and LX proteins
Experimental method
X-RAY DIFFRACTION
Resolution
2.4 Å

Loop

Sequence
CGAGAG
Length
6 nucleotides
Bulged bases (A, C, G, U)
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_42097.2
Basepair signature
cWW-tSH-F-F
Number of instances in this motif group
291

Unit IDs

4V9F|1|0|C|2695
4V9F|1|0|G|2696
4V9F|1|0|A|2697
4V9F|1|0|G|2698
4V9F|1|0|A|2699
4V9F|1|0|G|2700

Current chains

Chain 0
23S Ribosomal RNA

Nearby chains

Chain E
50S ribosomal protein L6P

Coloring options:

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