3D structure

PDB id
2FQN (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Homo sapiens cytoplasmic ribosomal decoding A site
Experimental method
X-RAY DIFFRACTION
Resolution
2.3 Å

Loop

Sequence
CGCU*AAAAG
Length
9 nucleotides
Bulged bases (A, C, G, U)
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_45102.1
Basepair signature
cWW-L-R-R-cWW-cWW
Number of instances in this motif group
1

Unit IDs

2FQN|1|A|C|7
2FQN|1|A|G|8
2FQN|1|A|C|9
2FQN|1|A|U|10
*
2FQN|1|B|A|38
2FQN|1|B|A|39
2FQN|1|B|A|40
2FQN|1|B|A|41
2FQN|1|B|G|42

Current chains

Chain A
5'-R(*UP*UP*GP*CP*GP*UP*CP*GP*CP*UP*CP*CP*GP*GP*AP*AP*AP*AP*GP*UP*CP*GP*C)-3'
Chain B
5'-R(*UP*UP*GP*CP*GP*UP*CP*GP*CP*UP*CP*CP*GP*GP*AP*AP*AP*AP*GP*UP*CP*GP*C)-3'

Nearby chains

No other chains within 10Å

Coloring options:

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