Motif IL_20829.1 Version IL_20829.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 1-15 | 3-4 | 4-12 | 5-11 | 6-10 | 7-8 | 7-9 | 7-10 | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | ➜ | 4V8P | F1 | LSU rRNA | A | 1018 | G | 1019 | G | 1020 | U | 1021 | A | 1022 | A | 1023 | A | 1024 | * | U | 1076 | U | 1077 | U | 1078 | A | 1079 | A | 1080 | A | 1081 | U | 1082 | U | 1083 | cWW | cSH | tWH | tHS | ncWW | cWW | tSH | ncSW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AGGUAAA*UUUAAAUU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GGUAA*UUAAAU | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
- Basepair signature
- cWW-bif-R-cSH-tWH-tHS-L-R-tSH-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: