Motif IL_86620.1 Version IL_86620.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | break | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 21 | 22 | 23 | 24 | 25 | 26 | 1-26 | 2-25 | 9-14 | 10-13 | 11-12 | 18-19 | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | ➜ | 4V8P | 2 | F1 | LSU rRNA | G | 1221 | A | 1222 | A | 1224 | C | 1225 | C | 1226 | A | 1227 | C | 1228 | A | 1229 | A | 1230 | A | 1231 | A | 1232 | * | U | 1326 | G | 1327 | A | 1328 | A | 1330 | A | 1331 | U | 1332 | G | 1333 | G | 1334 | A | 1335 | U | 1336 | G | 1337 | G | 1338 | C | 1339 | G | 1340 | C | 1341 | cWW | cWW | tHH | tHS | cWW | ncSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAUACCACAAAA*UGAAAAUGGAUGGCGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUACCACAAA*GAAAAUGGAUGGCG | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
- Basepair signature
- cWW-cWW-L-R-R-R-R-R-R-R-R-R-R-L-L-L-L-L-tHH-tHS-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: