Equivalence class NR_1.5_43554.4 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Domain | Rfam | Title | Method | Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4K31|1|B+ 4K31|1|C (rep) | RNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*GP*UP*UP*CP*CP*GP*GP*AP*AP*AP*AP*GP*UP*CP*GP*C)-3') | Leishmania | Eukarya | Crystal structure of apramycin bound to the leishmanial rRNA A-site | X-ray diffraction | 1.41 | 2013-07-31 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_1.5_43554.4 | NR_all_43554.3 | 2.74 | (1) 4K31|1|B+4K31|1|C | (0) | (28) 1LC4|1|A+1LC4|1|B, 1YRJ|1|A+1YRJ|1|B, 2ESI|1|A+2ESI|1|B, 2F4T|1|B+2F4T|1|A, 2FQN|1|A+2FQN|1|B, 2G5K|1|A+2G5K|1|B, 2O3V|1|A+2O3V|1|B, 2O3W|1|A+2O3W|1|B, 2O3X|1|A+2O3X|1|B, 2O3Y|1|A+2O3Y|1|B, 3BNQ|1|A+3BNQ|1|B, 3BNQ|1|C+3BNQ|1|D, 3BNR|1|A+3BNR|1|B, 3BNR|1|C+3BNR|1|D, 3BNS|1|A+3BNS|1|B, 3BNS|1|C+3BNS|1|D, 3TD0|1|B+3TD0|1|A, 3TD1|1|B+3TD1|1|A, 3WRU|1|A+3WRU|1|B, 4GPW|1|A+4GPW|1|B, 4GPX|1|A+4GPX|1|B, 4GPY|1|A+4GPY|1|B, 4K32|1|A+4K32|1|B, 4P20|1|A+4P20|1|B, 4PDQ|1|A+4PDQ|1|B, 4WCQ|1|A+4WCQ|1|B, 4WCR|1|A+4WCR|1|B, 4WCS|1|A+4WCS|1|B |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_1.5_43554.4 | NR_1.5_77275.1 | 2.93 | (1) 4K31|1|B+4K31|1|C | (0) | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 4K31|1|B+4K31|1|C | Crystal structure of apramycin bound to the leishmanial rRNA A-site | X-RAY DIFFRACTION | 1.41 | 22 |