Equivalence class NR_2.0_11108.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 8SX6|1|B+ 8SX6|1|A (rep) | RNA (5'-R(*(TLN)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*GP*G)-3') | synthetic construct | RNA duplex bound with GMP and AMP monomers | X-ray diffraction | 1.45 | 2023-05-31 | |||
| 2 | 8SY1|1|A+ 8SY1|1|B | RNA (5'-R(*(TLN)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G*(GMA))-3') | synthetic construct | RNA duplex bound with imidazolium bridged GA dinucleotide | X-ray diffraction | 1.76 | 2023-05-31 | |||
| 3 | 8SWO|1|A+ 8SWO|1|B | RNA (5'-R(*(TLN)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G*(GA3))-3') | synthetic construct | GpppA dinucleotide ligand binding to RNA UC template | X-ray diffraction | 1.64 | 2023-05-31 | |||
| 4 | 8SY1|1|C+ 8SY1|1|D | RNA (5'-R(*(TLN)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G*(GMA))-3') | synthetic construct | RNA duplex bound with imidazolium bridged GA dinucleotide | X-ray diffraction | 1.76 | 2023-05-31 |
Release history
| Release | 3.285 | 3.286 | 3.287 | 3.288 | 3.289 | 3.290 | 3.291 | 3.292 | 3.293 | 3.294 | 3.295 | 3.296 | 3.297 | 3.298 | 3.299 | 3.300 | 3.301 | 3.302 | 3.303 | 3.304 | 3.305 | 3.306 | 3.307 | 3.308 | 3.309 | 3.310 | 3.311 | 3.312 | 3.313 | 3.314 | 3.315 | 3.316 | 3.317 | 3.318 | 3.319 | 3.320 | 3.321 | 3.322 | 3.323 | 3.324 | 3.325 | 3.326 | 3.327 | 3.328 | 3.329 | 3.330 | 3.331 | 3.332 | 3.333 | 3.334 | 3.335 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2023-05-31 | 2023-06-07 | 2023-06-14 | 2023-06-21 | 2023-06-28 | 2023-07-05 | 2023-07-12 | 2023-07-19 | 2023-07-26 | 2023-08-02 | 2023-08-09 | 2023-08-16 | 2023-08-23 | 2023-08-30 | 2023-09-06 | 2023-09-13 | 2023-09-20 | 2023-09-27 | 2023-10-04 | 2023-10-11 | 2023-10-18 | 2023-10-25 | 2023-11-01 | 2023-11-08 | 2023-11-15 | 2023-11-24 | 2023-11-29 | 2023-12-06 | 2023-12-13 | 2023-12-20 | 2023-12-27 | 2024-01-03 | 2024-01-10 | 2024-01-17 | 2024-01-24 | 2024-01-31 | 2024-02-07 | 2024-02-14 | 2024-02-21 | 2024-02-28 | 2024-03-06 | 2024-03-13 | 2024-03-20 | 2024-03-27 | 2024-04-03 | 2024-04-10 | 2024-04-17 | 2024-04-24 | 2024-05-01 | 2024-05-08 | 2024-05-15 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 8SY1|1|A+8SY1|1|B | RNA duplex bound with imidazolium bridged GA dinucleotide | X-RAY DIFFRACTION | 1.76 | 10 |
| 2 | 8SWO|1|A+8SWO|1|B | GpppA dinucleotide ligand binding to RNA UC template | X-RAY DIFFRACTION | 1.64 | 10 |
| 3 | 8SY1|1|C+8SY1|1|D | RNA duplex bound with imidazolium bridged GA dinucleotide | X-RAY DIFFRACTION | 1.76 | 10 |
| 4 | 8SX6|1|B+8SX6|1|A | RNA duplex bound with GMP and AMP monomers | X-RAY DIFFRACTION | 1.45 | 12 |