#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
18SX6|1|B+ 8SX6|1|A (rep)RNA (5'-R(*(TLN)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*GP*G)-3')synthetic constructRNA duplex bound with GMP and AMP monomersX-ray diffraction1.452023-05-31
28SY1|1|A+ 8SY1|1|BRNA (5'-R(*(TLN)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G*(GMA))-3')synthetic constructRNA duplex bound with imidazolium bridged GA dinucleotideX-ray diffraction1.762023-05-31
38SWO|1|A+ 8SWO|1|BRNA (5'-R(*(TLN)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G*(GA3))-3')synthetic constructGpppA dinucleotide ligand binding to RNA UC templateX-ray diffraction1.642023-05-31
48SY1|1|C+ 8SY1|1|DRNA (5'-R(*(TLN)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G*(GMA))-3')synthetic constructRNA duplex bound with imidazolium bridged GA dinucleotideX-ray diffraction1.762023-05-31

Release history

Release3.2853.2863.2873.2883.2893.2903.2913.2923.2933.2943.2953.2963.2973.2983.2993.3003.3013.3023.3033.3043.3053.3063.3073.3083.3093.3103.3113.3123.3133.3143.3153.3163.3173.3183.3193.3203.3213.3223.3233.3243.3253.3263.3273.3283.3293.3303.3313.3323.3333.3343.3353.3363.3373.3383.3393.3403.3413.3423.3433.3443.3453.3463.3473.3483.3493.3503.3513.3523.3533.3543.355
Date2023-05-312023-06-072023-06-142023-06-212023-06-282023-07-052023-07-122023-07-192023-07-262023-08-022023-08-092023-08-162023-08-232023-08-302023-09-062023-09-132023-09-202023-09-272023-10-042023-10-112023-10-182023-10-252023-11-012023-11-082023-11-152023-11-242023-11-292023-12-062023-12-132023-12-202023-12-272024-01-032024-01-102024-01-172024-01-242024-01-312024-02-072024-02-142024-02-212024-02-282024-03-062024-03-132024-03-202024-03-272024-04-032024-04-102024-04-172024-04-242024-05-012024-05-082024-05-152024-05-222024-05-292024-06-052024-06-122024-06-192024-06-262024-07-032024-07-102024-07-172024-07-252024-07-312024-08-072024-08-142024-08-212024-08-282024-09-042024-09-112024-09-182024-09-252024-10-02

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
18SY1|1|A+ 8SY1|1|BRNA duplex bound with imidazolium bridged GA dinucleotideX-RAY DIFFRACTION1.7610
28SWO|1|A+ 8SWO|1|BGpppA dinucleotide ligand binding to RNA UC templateX-RAY DIFFRACTION1.6410
38SY1|1|C+ 8SY1|1|DRNA duplex bound with imidazolium bridged GA dinucleotideX-RAY DIFFRACTION1.7610
48SX6|1|B+ 8SX6|1|ARNA duplex bound with GMP and AMP monomersX-RAY DIFFRACTION1.4512

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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