#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
18SX6|1|B+ 8SX6|1|A (rep)RNA (5'-R(*(TLN)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*GP*G)-3')synthetic constructRNA duplex bound with GMP and AMP monomersX-ray diffraction1.452023-05-31
28SY1|1|A+ 8SY1|1|BRNA (5'-R(*(TLN)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G*(GMA))-3')synthetic constructRNA duplex bound with imidazolium bridged GA dinucleotideX-ray diffraction1.762023-05-31
38SWO|1|A+ 8SWO|1|BRNA (5'-R(*(TLN)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G*(GA3))-3')synthetic constructGpppA dinucleotide ligand binding to RNA UC templateX-ray diffraction1.642023-05-31
48SY1|1|C+ 8SY1|1|DRNA (5'-R(*(TLN)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G*(GMA))-3')synthetic constructRNA duplex bound with imidazolium bridged GA dinucleotideX-ray diffraction1.762023-05-31

Release history

Release3.2853.2863.2873.2883.2893.2903.2913.2923.2933.2943.2953.2963.2973.2983.2993.3003.3013.3023.3033.3043.3053.3063.3073.3083.3093.3103.3113.3123.3133.3143.3153.3163.3173.3183.3193.3203.3213.3223.3233.3243.3253.3263.3273.3283.3293.330
Date2023-05-312023-06-072023-06-142023-06-212023-06-282023-07-052023-07-122023-07-192023-07-262023-08-022023-08-092023-08-162023-08-232023-08-302023-09-062023-09-132023-09-202023-09-272023-10-042023-10-112023-10-182023-10-252023-11-012023-11-082023-11-152023-11-242023-11-292023-12-062023-12-132023-12-202023-12-272024-01-032024-01-102024-01-172024-01-242024-01-312024-02-072024-02-142024-02-212024-02-282024-03-062024-03-132024-03-202024-03-272024-04-032024-04-10

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
18SY1|1|A+8SY1|1|BRNA duplex bound with imidazolium bridged GA dinucleotideX-RAY DIFFRACTION1.7610
28SWO|1|A+8SWO|1|BGpppA dinucleotide ligand binding to RNA UC templateX-RAY DIFFRACTION1.6410
38SY1|1|C+8SY1|1|DRNA duplex bound with imidazolium bridged GA dinucleotideX-RAY DIFFRACTION1.7610
48SX6|1|B+8SX6|1|ARNA duplex bound with GMP and AMP monomersX-RAY DIFFRACTION1.4512
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