#IFECompound(s)RNA source organismTitleMethodResolutionDate
12OIY|1|A+ 2OIY|1|B (rep)5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*AP*GP*CP*GP*CP*GP*CP*AP*CP*GP*GP*CP*AP*AP*G)-3'Crystal structure of the duplex form of the HIV-1(LAI) RNA dimerization initiation siteX-RAY DIFFRACTION1.62007-12-25
21NLC|1|B+ 1NLC|1|AHIV-1 DIS(MAL) genomic RNAHIV-1 DIS(Mal) duplex Zn-soakedX-RAY DIFFRACTION1.852003-05-13
32QEK|1|A+ 2QEK|1|BHIV-1 subtype F DIS genomic RNAHIV-1 subtype F DIS RNA extended duplex formX-RAY DIFFRACTION1.82008-05-06
43C44|1|A+ 3C44|1|BHIV-1 subtype F genomic RNACrystal structure of HIV-1 subtype F DIS extended duplex RNA bound to paromomycinX-RAY DIFFRACTION22008-05-06
53DVV|1|A+ 3DVV|1|BHIV-1 genomic RNACrystal structure of HIV-1 subtype F DIS extended duplex RNA bound to ribostamycin (U267OMe)X-RAY DIFFRACTION22008-08-12

Release history

Release2.1322.1332.1342.1352.1362.1372.1382.1392.1402.1412.1422.1432.1442.1452.1462.1472.1482.1492.1502.1512.152
Date2017-06-212017-06-242017-06-282017-07-042017-07-102017-07-152017-07-262017-07-312017-08-052017-08-122017-08-192017-08-262017-09-032017-09-092017-09-162017-09-232017-09-302017-10-072017-10-142017-10-212017-10-28

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_2.0_60167.3NR_2.0_60167.22.132(5) 3DVV|1|A+3DVV|1|B, 2QEK|1|A+2QEK|1|B, 2OIY|1|A+2OIY|1|B, 3C44|1|A+3C44|1|B, 1NLC|1|B+1NLC|1|A(0) (3) 3C5D|1|A+3C5D|1|B, 3C7R|1|A+3C7R|1|B, 3C3Z|1|A+3C3Z|1|B

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_2.0_60167.3NR_2.0_60167.42.153(5) 1NLC|1|B+1NLC|1|A, 3DVV|1|A+3DVV|1|B, 3C44|1|A+3C44|1|B, 2QEK|1|A+2QEK|1|B, 2OIY|1|A+2OIY|1|B(0) (3) 3C7R|1|A+3C7R|1|B, 3C5D|1|A+3C5D|1|B, 3C3Z|1|A+3C3Z|1|B

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
13DVV|1|A+3DVV|1|BCrystal structure of HIV-1 subtype F DIS extended duplex RNA bound to ribostamycin (U267OMe)X-RAY DIFFRACTION222
23C44|1|A+3C44|1|BCrystal structure of HIV-1 subtype F DIS extended duplex RNA bound to paromomycinX-RAY DIFFRACTION223
32OIY|1|A+2OIY|1|BCrystal structure of the duplex form of the HIV-1(LAI) RNA dimerization initiation siteX-RAY DIFFRACTION1.623
41NLC|1|B+1NLC|1|AHIV-1 DIS(Mal) duplex Zn-soakedX-RAY DIFFRACTION1.8526
52QEK|1|A+2QEK|1|BHIV-1 subtype F DIS RNA extended duplex formX-RAY DIFFRACTION1.823