#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
17SOS|1|B (rep)RNA (5'-R(*AP*AP*AP*A)-3')synthetic constructLaM domain of human LARP1 in complex with AAAA RNAX-ray diffraction1.252022-08-03
26SCE|1|Bcyclic oligoadenylatesynthetic constructStructure of a Type III CRISPR defence DNA nuclease activated by cyclic oligoadenylateX-ray diffraction1.832020-02-19
36XL1|1|CcA4synthetic constructcrystal structure of cA4-activated Cad1(D294N)X-ray diffraction1.952020-12-30
46SCF|1|Icyclic oligoadenylatesynthetic constructA viral anti-CRISPR subverts type III CRISPR immunity by rapid degradation of cyclic oligoadenylateX-ray diffraction1.552019-10-30
56SCF|1|Kcyclic oligoadenylatesynthetic constructA viral anti-CRISPR subverts type III CRISPR immunity by rapid degradation of cyclic oligoadenylateX-ray diffraction1.552019-10-30
66YUD|1|Kcyclic tetra-adenylate (cA4)synthetic constructStructure of Csx3/Crn3 from Archaeoglobus fulgidus in complex with cyclic tetra-adenylate (cA4)X-ray diffraction1.842020-08-19
76YUD|1|Ocyclic tetra-adenylate (cA4)synthetic constructStructure of Csx3/Crn3 from Archaeoglobus fulgidus in complex with cyclic tetra-adenylate (cA4)X-ray diffraction1.842020-08-19
86SCF|1|Mcyclic oligoadenylatesynthetic constructA viral anti-CRISPR subverts type III CRISPR immunity by rapid degradation of cyclic oligoadenylateX-ray diffraction1.552019-10-30
96YUD|1|Pcyclic tetra-adenylate (cA4)synthetic constructStructure of Csx3/Crn3 from Archaeoglobus fulgidus in complex with cyclic tetra-adenylate (cA4)X-ray diffraction1.842020-08-19
106SCF|1|Lcyclic oligoadenylatesynthetic constructA viral anti-CRISPR subverts type III CRISPR immunity by rapid degradation of cyclic oligoadenylateX-ray diffraction1.552019-10-30
116YUD|1|Mcyclic tetra-adenylate (cA4)synthetic constructStructure of Csx3/Crn3 from Archaeoglobus fulgidus in complex with cyclic tetra-adenylate (cA4)X-ray diffraction1.842020-08-19
126YUD|1|Qcyclic tetra-adenylate (cA4)synthetic constructStructure of Csx3/Crn3 from Archaeoglobus fulgidus in complex with cyclic tetra-adenylate (cA4)X-ray diffraction1.842020-08-19
137DID|1|CRNA (5'-R(*AP*AP*AP*A)-3')Mycoplasma genitalium G37Mycoplasma genitalium RNase R in complex with ribose methylated single-stranded RNAX-ray diffraction1.92021-03-17
147Z55|1|CCCCyclic RNA cA4synthetic constructCrystal Structure of the Ring Nuclease 0455 from Sulfolobus islandicus (Sis0455) in complex with its substrateX-ray diffraction1.6642022-11-23

Release history

Release3.2703.2713.2723.2733.2743.2753.2763.2773.2783.2793.2803.2813.2823.2833.2843.2853.2863.2873.2883.2893.2903.2913.2923.2933.2943.2953.2963.2973.2983.2993.3003.3013.3023.3033.3043.3053.3063.3073.3083.309
Date2023-02-152023-02-222023-03-012023-03-082023-03-152023-03-222023-03-292023-04-052023-04-122023-04-192023-04-262023-05-032023-05-102023-05-172023-05-242023-05-312023-06-072023-06-142023-06-212023-06-282023-07-052023-07-122023-07-192023-07-262023-08-022023-08-092023-08-162023-08-232023-08-302023-09-062023-09-132023-09-202023-09-272023-10-042023-10-112023-10-182023-10-252023-11-012023-11-082023-11-15

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_2.0_64918.15NR_2.0_64918.143.270(14) 6SCE|1|B, 7SOS|1|B, 7DID|1|C, 6YUD|1|Q, 6YUD|1|P, 6YUD|1|O, 6YUD|1|M, 6YUD|1|K, 6XL1|1|C, 6SCF|1|M, 6SCF|1|L, 6SCF|1|K, 6SCF|1|I, 7Z55|1|CCC(0) (0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_2.0_64918.15NR_2.0_64918.163.310(14) 6XL1|1|C, 6SCF|1|M, 6SCF|1|L, 6SCF|1|K, 6SCF|1|I, 6SCE|1|B, 7Z55|1|CCC, 7SOS|1|B, 7DID|1|C, 6YUD|1|Q, 6YUD|1|P, 6YUD|1|O, 6YUD|1|M, 6YUD|1|K(0) (1) 8Q42|1|X

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
17SOS|1|BLaM domain of human LARP1 in complex with AAAA RNAX-RAY DIFFRACTION1.254
26SCF|1|MA viral anti-CRISPR subverts type III CRISPR immunity by rapid degradation of cyclic oligoadenylateX-RAY DIFFRACTION1.554
36SCF|1|KA viral anti-CRISPR subverts type III CRISPR immunity by rapid degradation of cyclic oligoadenylateX-RAY DIFFRACTION1.554
46SCF|1|LA viral anti-CRISPR subverts type III CRISPR immunity by rapid degradation of cyclic oligoadenylateX-RAY DIFFRACTION1.554
57Z55|1|CCCCrystal Structure of the Ring Nuclease 0455 from Sulfolobus islandicus (Sis0455) in complex with its substrateX-RAY DIFFRACTION1.6644
66XL1|1|Ccrystal structure of cA4-activated Cad1(D294N)X-RAY DIFFRACTION1.954
76YUD|1|KStructure of Csx3/Crn3 from Archaeoglobus fulgidus in complex with cyclic tetra-adenylate (cA4)X-RAY DIFFRACTION1.844
86YUD|1|PStructure of Csx3/Crn3 from Archaeoglobus fulgidus in complex with cyclic tetra-adenylate (cA4)X-RAY DIFFRACTION1.844
96YUD|1|OStructure of Csx3/Crn3 from Archaeoglobus fulgidus in complex with cyclic tetra-adenylate (cA4)X-RAY DIFFRACTION1.844
106YUD|1|QStructure of Csx3/Crn3 from Archaeoglobus fulgidus in complex with cyclic tetra-adenylate (cA4)X-RAY DIFFRACTION1.844
116YUD|1|MStructure of Csx3/Crn3 from Archaeoglobus fulgidus in complex with cyclic tetra-adenylate (cA4)X-RAY DIFFRACTION1.844
126SCE|1|BStructure of a Type III CRISPR defence DNA nuclease activated by cyclic oligoadenylateX-RAY DIFFRACTION1.834
136SCF|1|IA viral anti-CRISPR subverts type III CRISPR immunity by rapid degradation of cyclic oligoadenylateX-RAY DIFFRACTION1.554
147DID|1|CMycoplasma genitalium RNase R in complex with ribose methylated single-stranded RNAX-RAY DIFFRACTION1.93
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