#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
16Q1H|1|D (rep)RNA (5'-R(P*AP*AP*A)-3')Pseudomonas aeruginosaStructure of P. aeruginosa ATCC27853 NucC, cAAA-bound formX-ray diffraction1.452019-12-25
26Q1H|1|HRNA (5'-R(P*AP*AP*A)-3')Pseudomonas aeruginosaStructure of P. aeruginosa ATCC27853 NucC, cAAA-bound formX-ray diffraction1.452019-12-25
36P7P|1|FCyclic tri-AMP (5'-3' linked)Escherichia coliStructure of E. coli MS115-1 NucC, cAAA-bound formX-ray diffraction1.662019-12-25
46P7P|1|ECyclic tri-AMP (5'-3' linked)Escherichia coliStructure of E. coli MS115-1 NucC, cAAA-bound formX-ray diffraction1.662019-12-25
56P7P|1|DCyclic tri-AMP (5'-3' linked)Escherichia coliStructure of E. coli MS115-1 NucC, cAAA-bound formX-ray diffraction1.662019-12-25
67ZGV|1|DRNA (5'-R(P*AP*AP*A)-3')SerratiaSerratia NucC bound to cA3X-ray diffraction1.482022-10-26
77SOQ|1|BRNA (5'-R(*AP*AP*A)-3')synthetic constructLaM domain of human LARP1 in complex with AAA RNAX-ray diffraction1.152022-08-03
87SOR|1|DRNA (5'-R(*AP*AP*A)-3')synthetic constructLaM domain of human LARP1 in complex with AAA RNAX-ray diffraction1.352022-08-03
97SOR|1|BRNA (5'-R(*AP*AP*A)-3')synthetic constructLaM domain of human LARP1 in complex with AAA RNAX-ray diffraction1.352022-08-03
106YWO|1|FRNA (5'-R(*AP*AP*A)-3')synthetic constructCutA in complex with A3 RNAX-ray diffraction1.92020-08-05
116YWO|1|ERNA (5'-R(*AP*AP*A)-3')synthetic constructCutA in complex with A3 RNAX-ray diffraction1.92020-08-05
126YWO|1|KRNA (5'-R(*AP*AP*A)-3')synthetic constructCutA in complex with A3 RNAX-ray diffraction1.92020-08-05
136YWO|1|IRNA (5'-R(*AP*AP*A)-3')synthetic constructCutA in complex with A3 RNAX-ray diffraction1.92020-08-05
143GPQ|1|ERNA (5'-R(*AP*AP*A)-3')Crystal structure of macro domain of Chikungunya virus in complex with RNAX-ray diffraction22009-07-21
153GPQ|1|FRNA (5'-R(*AP*AP*A)-3')Crystal structure of macro domain of Chikungunya virus in complex with RNAX-ray diffraction22009-07-21

Release history

Release3.2543.2553.2563.2573.2583.2593.2603.2613.2623.2633.2643.2653.2663.2673.2683.2693.2703.2713.2723.2733.2743.2753.2763.2773.2783.2793.2803.2813.2823.2833.2843.2853.2863.2873.2883.2893.2903.2913.2923.2933.2943.2953.2963.2973.2983.2993.3003.3013.3023.3033.3043.3053.3063.3073.3083.3093.3103.3113.3123.3133.3143.3153.3163.3173.3183.3193.3203.3213.3223.3233.324
Date2022-10-262022-11-022022-11-092022-11-162022-11-232022-11-302022-12-072022-12-142022-12-212022-12-282023-01-042023-01-112023-01-182023-01-252023-02-012023-02-082023-02-152023-02-222023-03-012023-03-082023-03-152023-03-222023-03-292023-04-052023-04-122023-04-192023-04-262023-05-032023-05-102023-05-172023-05-242023-05-312023-06-072023-06-142023-06-212023-06-282023-07-052023-07-122023-07-192023-07-262023-08-022023-08-092023-08-162023-08-232023-08-302023-09-062023-09-132023-09-202023-09-272023-10-042023-10-112023-10-182023-10-252023-11-012023-11-082023-11-152023-11-242023-11-292023-12-062023-12-132023-12-202023-12-272024-01-032024-01-102024-01-172024-01-242024-01-312024-02-072024-02-142024-02-212024-02-28

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_2.0_65223.7NR_2.0_65223.63.254(14) 6YWO|1|K, 6YWO|1|I, 6YWO|1|F, 6YWO|1|E, 6Q1H|1|H, 6Q1H|1|D, 6P7P|1|F, 6P7P|1|E, 6P7P|1|D, 3GPQ|1|F, 3GPQ|1|E, 7SOR|1|D, 7SOR|1|B, 7SOQ|1|B(1) 7ZGV|1|D(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
17SOQ|1|BLaM domain of human LARP1 in complex with AAA RNAX-RAY DIFFRACTION1.153
27SOR|1|BLaM domain of human LARP1 in complex with AAA RNAX-RAY DIFFRACTION1.353
37SOR|1|DLaM domain of human LARP1 in complex with AAA RNAX-RAY DIFFRACTION1.353
46Q1H|1|HStructure of P. aeruginosa ATCC27853 NucC, cAAA-bound formX-RAY DIFFRACTION1.453
56Q1H|1|DStructure of P. aeruginosa ATCC27853 NucC, cAAA-bound formX-RAY DIFFRACTION1.453
66P7P|1|DStructure of E. coli MS115-1 NucC, cAAA-bound formX-RAY DIFFRACTION1.663
76P7P|1|EStructure of E. coli MS115-1 NucC, cAAA-bound formX-RAY DIFFRACTION1.663
86P7P|1|FStructure of E. coli MS115-1 NucC, cAAA-bound formX-RAY DIFFRACTION1.663
96YWO|1|ECutA in complex with A3 RNAX-RAY DIFFRACTION1.93
106YWO|1|ICutA in complex with A3 RNAX-RAY DIFFRACTION1.93
116YWO|1|FCutA in complex with A3 RNAX-RAY DIFFRACTION1.93
126YWO|1|KCutA in complex with A3 RNAX-RAY DIFFRACTION1.93
133GPQ|1|ECrystal structure of macro domain of Chikungunya virus in complex with RNAX-RAY DIFFRACTION22
143GPQ|1|FCrystal structure of macro domain of Chikungunya virus in complex with RNAX-RAY DIFFRACTION22
157ZGV|1|DSerratia NucC bound to cA3X-RAY DIFFRACTION1.483
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