Equivalence class NR_2.0_65223.7 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6Q1H|1|D (rep) | RNA (5'-R(P*AP*AP*A)-3') | Pseudomonas aeruginosa | Bacteria | Structure of P. aeruginosa ATCC27853 NucC, cAAA-bound form | X-ray diffraction | 1.45 | 2019-12-25 | ||
| 2 | 6Q1H|1|H | RNA (5'-R(P*AP*AP*A)-3') | Pseudomonas aeruginosa | Bacteria | Structure of P. aeruginosa ATCC27853 NucC, cAAA-bound form | X-ray diffraction | 1.45 | 2019-12-25 | ||
| 3 | 6P7P|1|F | Cyclic tri-AMP (5'-3' linked) | Escherichia coli | Bacteria | Structure of E. coli MS115-1 NucC, cAAA-bound form | X-ray diffraction | 1.66 | 2019-12-25 | ||
| 4 | 6P7P|1|E | Cyclic tri-AMP (5'-3' linked) | Escherichia coli | Bacteria | Structure of E. coli MS115-1 NucC, cAAA-bound form | X-ray diffraction | 1.66 | 2019-12-25 | ||
| 5 | 6P7P|1|D | Cyclic tri-AMP (5'-3' linked) | Escherichia coli | Bacteria | Structure of E. coli MS115-1 NucC, cAAA-bound form | X-ray diffraction | 1.66 | 2019-12-25 | ||
| 6 | 7ZGV|1|D | RNA (5'-R(P*AP*AP*A)-3') | Serratia | Serratia NucC bound to cA3 | X-ray diffraction | 1.48 | 2022-10-26 | |||
| 7 | 7SOQ|1|B | RNA (5'-R(*AP*AP*A)-3') | synthetic construct | Synthetic | LaM domain of human LARP1 in complex with AAA RNA | X-ray diffraction | 1.15 | 2022-08-03 | ||
| 8 | 7SOR|1|D | RNA (5'-R(*AP*AP*A)-3') | synthetic construct | Synthetic | LaM domain of human LARP1 in complex with AAA RNA | X-ray diffraction | 1.35 | 2022-08-03 | ||
| 9 | 7SOR|1|B | RNA (5'-R(*AP*AP*A)-3') | synthetic construct | Synthetic | LaM domain of human LARP1 in complex with AAA RNA | X-ray diffraction | 1.35 | 2022-08-03 | ||
| 10 | 6YWO|1|F | RNA (5'-R(*AP*AP*A)-3') | synthetic construct | Synthetic | CutA in complex with A3 RNA | X-ray diffraction | 1.9 | 2020-08-05 | ||
| 11 | 6YWO|1|E | RNA (5'-R(*AP*AP*A)-3') | synthetic construct | Synthetic | CutA in complex with A3 RNA | X-ray diffraction | 1.9 | 2020-08-05 | ||
| 12 | 6YWO|1|K | RNA (5'-R(*AP*AP*A)-3') | synthetic construct | Synthetic | CutA in complex with A3 RNA | X-ray diffraction | 1.9 | 2020-08-05 | ||
| 13 | 6YWO|1|I | RNA (5'-R(*AP*AP*A)-3') | synthetic construct | Synthetic | CutA in complex with A3 RNA | X-ray diffraction | 1.9 | 2020-08-05 | ||
| 14 | 3GPQ|1|E | RNA (5'-R(*AP*AP*A)-3') | Crystal structure of macro domain of Chikungunya virus in complex with RNA | X-ray diffraction | 2 | 2009-07-21 | ||||
| 15 | 3GPQ|1|F | RNA (5'-R(*AP*AP*A)-3') | Crystal structure of macro domain of Chikungunya virus in complex with RNA | X-ray diffraction | 2 | 2009-07-21 |
Release history
| Release | 3.254 | 3.255 | 3.256 | 3.257 | 3.258 | 3.259 | 3.260 | 3.261 | 3.262 | 3.263 | 3.264 | 3.265 | 3.266 | 3.267 | 3.268 | 3.269 | 3.270 | 3.271 | 3.272 | 3.273 | 3.274 | 3.275 | 3.276 | 3.277 | 3.278 | 3.279 | 3.280 | 3.281 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2022-10-26 | 2022-11-02 | 2022-11-09 | 2022-11-16 | 2022-11-23 | 2022-11-30 | 2022-12-07 | 2022-12-14 | 2022-12-21 | 2022-12-28 | 2023-01-04 | 2023-01-11 | 2023-01-18 | 2023-01-25 | 2023-02-01 | 2023-02-08 | 2023-02-15 | 2023-02-22 | 2023-03-01 | 2023-03-08 | 2023-03-15 | 2023-03-22 | 2023-03-29 | 2023-04-05 | 2023-04-12 | 2023-04-19 | 2023-04-26 | 2023-05-03 |
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 7ZGV|1|D | Serratia NucC bound to cA3 | X-RAY DIFFRACTION | 1.48 | 3 |
| 2 | 6YWO|1|K | CutA in complex with A3 RNA | X-RAY DIFFRACTION | 1.9 | 3 |
| 3 | 6YWO|1|F | CutA in complex with A3 RNA | X-RAY DIFFRACTION | 1.9 | 3 |
| 4 | 6YWO|1|I | CutA in complex with A3 RNA | X-RAY DIFFRACTION | 1.9 | 3 |
| 5 | 6YWO|1|E | CutA in complex with A3 RNA | X-RAY DIFFRACTION | 1.9 | 3 |
| 6 | 6P7P|1|F | Structure of E. coli MS115-1 NucC, cAAA-bound form | X-RAY DIFFRACTION | 1.66 | 3 |
| 7 | 6P7P|1|E | Structure of E. coli MS115-1 NucC, cAAA-bound form | X-RAY DIFFRACTION | 1.66 | 3 |
| 8 | 6P7P|1|D | Structure of E. coli MS115-1 NucC, cAAA-bound form | X-RAY DIFFRACTION | 1.66 | 3 |
| 9 | 6Q1H|1|D | Structure of P. aeruginosa ATCC27853 NucC, cAAA-bound form | X-RAY DIFFRACTION | 1.45 | 3 |
| 10 | 6Q1H|1|H | Structure of P. aeruginosa ATCC27853 NucC, cAAA-bound form | X-RAY DIFFRACTION | 1.45 | 3 |
| 11 | 7SOR|1|D | LaM domain of human LARP1 in complex with AAA RNA | X-RAY DIFFRACTION | 1.35 | 3 |
| 12 | 7SOR|1|B | LaM domain of human LARP1 in complex with AAA RNA | X-RAY DIFFRACTION | 1.35 | 3 |
| 13 | 7SOQ|1|B | LaM domain of human LARP1 in complex with AAA RNA | X-RAY DIFFRACTION | 1.15 | 3 |
| 14 | 3GPQ|1|E | Crystal structure of macro domain of Chikungunya virus in complex with RNA | X-RAY DIFFRACTION | 2 | 2 |
| 15 | 3GPQ|1|F | Crystal structure of macro domain of Chikungunya virus in complex with RNA | X-RAY DIFFRACTION | 2 | 2 |