#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodÅDate
16N6I|1|C (rep)RNA (5'-R(P*GP*G)-3')synthetic constructSyntheticHuman REXO2 bound to pGGX-ray diffraction1.432019-06-12
26N6I|1|DRNA (5'-R(P*GP*G)-3')synthetic constructSyntheticHuman REXO2 bound to pGGX-ray diffraction1.432019-06-12
36N6A|1|DRNA (5'-R(P*GP*G)-3')Pseudomonas aeruginosaBacteriaVibrio cholerae Oligoribonuclease bound to pGGX-ray diffraction1.52019-06-12
47MPL|1|D5'-phosphorylated GGsynthetic constructSyntheticBartonella henselae NrnC bound to pGGX-ray diffraction1.82021-09-15
57MPL|1|H5'-phosphorylated GGsynthetic constructSyntheticBartonella henselae NrnC bound to pGGX-ray diffraction1.82021-09-15
67MPL|1|B5'-phosphorylated GGsynthetic constructSyntheticBartonella henselae NrnC bound to pGGX-ray diffraction1.82021-09-15
77MPL|1|J5'-phosphorylated GGsynthetic constructSyntheticBartonella henselae NrnC bound to pGGX-ray diffraction1.82021-09-15
87MPL|1|F5'-phosphorylated GGsynthetic constructSyntheticBartonella henselae NrnC bound to pGGX-ray diffraction1.82021-09-15
97MPL|1|N5'-phosphorylated GGsynthetic constructSyntheticBartonella henselae NrnC bound to pGGX-ray diffraction1.82021-09-15
107MPL|1|L5'-phosphorylated GGsynthetic constructSyntheticBartonella henselae NrnC bound to pGGX-ray diffraction1.82021-09-15
117MPL|1|P5'-phosphorylated GGsynthetic constructSyntheticBartonella henselae NrnC bound to pGGX-ray diffraction1.82021-09-15
127VA3|1|CRNA (5'-R(P*GP*G)-3')synthetic constructSyntheticPaOrn Oligoribonuclease D11A mutant with substrate pGpG complex structureX-ray diffraction1.82022-09-07
136IJ2|1|FRNA (5'-R(P*GP*G)-3')synthetic constructSyntheticCrystal structure of a standalone versatile EAL protein from Vibrio cholerae O395 - 5'-pGpG bound formX-ray diffraction1.72019-10-09
146IJ2|1|GRNA (5'-R(P*GP*G)-3')synthetic constructSyntheticCrystal structure of a standalone versatile EAL protein from Vibrio cholerae O395 - 5'-pGpG bound formX-ray diffraction1.72019-10-09
156IJ2|1|HRNA (5'-R(P*GP*G)-3')synthetic constructSyntheticCrystal structure of a standalone versatile EAL protein from Vibrio cholerae O395 - 5'-pGpG bound formX-ray diffraction1.72019-10-09
166IJ2|1|ERNA (5'-R(P*GP*G)-3')synthetic constructSyntheticCrystal structure of a standalone versatile EAL protein from Vibrio cholerae O395 - 5'-pGpG bound formX-ray diffraction1.72019-10-09
176OWL|1|BRNA (5'-R(P*G)-3')synthetic constructSyntheticRNA oligonucleotides with 3'-arabino guanosine co-crystallized with GMPX-ray diffraction22020-02-26
186OWL|1|CRNA (5'-R(P*G)-3')synthetic constructSyntheticRNA oligonucleotides with 3'-arabino guanosine co-crystallized with GMPX-ray diffraction22020-02-26
196S0M|1|CRNA (5'-R(P*G)-3')Escherichia coliBacteriaStructural and dynamic studies provide insights into specificity and allosteric regulation of Ribonuclease AS, a key enzyme in mycobacterial virulenceX-ray diffraction22019-08-28
207MPU|1|D5'-phosphorylated GGsynthetic constructSyntheticBrucella melitensis NrnC bound to pGGX-ray diffraction1.722021-09-15

Release history

Release3.2643.2653.2663.2673.2683.2693.2703.2713.2723.2733.2743.2753.2763.2773.2783.2793.2803.281
Date2023-01-042023-01-112023-01-182023-01-252023-02-012023-02-082023-02-152023-02-222023-03-012023-03-082023-03-152023-03-222023-03-292023-04-052023-04-122023-04-192023-04-262023-05-03

Parents


Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
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