Equivalence class NR_2.5_10157.66 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4YBB|1|DB (rep) | 5S ribosomal RNA | 5S rRNA | Escherichia coli | Bacteria | RF00001 | High-resolution structure of the Escherichia coli ribosome | X-ray diffraction | 2.1 | 2015-03-18 |
| 2 | 4YBB|1|CB | 5S ribosomal RNA | 5S rRNA | Escherichia coli | Bacteria | RF00001 | High-resolution structure of the Escherichia coli ribosome | X-ray diffraction | 2.1 | 2015-03-18 |
| 3 | 6XZ7|1|B | 5S ribosomal RNA | 5S rRNA | Escherichia coli | Bacteria | RF00001 | E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet). | Electron microscopy | 2.1 | 2020-07-22 |
| 4 | 6PJ6|1|J | 5S ribosomal RNA | 5S rRNA | Escherichia coli | Bacteria | RF00001 | High resolution cryo-EM structure of E.coli 50S | Electron microscopy | 2.2 | 2020-01-22 |
| 5 | 6PC6|1|J | 5S ribosomal RNA | 5S ribosomal RNA | Escherichia coli | Bacteria | RF00001 | E. coli 50S ribosome bound to compound 47 | Electron microscopy | 2.5 | 2020-06-17 |
| 6 | 6PCR|1|J | 5S ribosomal RNA | 5S ribosomal RNA | Escherichia coli | Bacteria | RF00001 | E. coli 50S ribosome bound to compound 40o | Electron microscopy | 2.5 | 2020-06-17 |
| 7 | 6PC7|1|J | 5S ribosomal RNA | 5S ribosomal RNA | Escherichia coli | Bacteria | RF00001 | E. coli 50S ribosome bound to compound 46 | Electron microscopy | 2.5 | 2020-06-17 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 4YBB|1|CB | High-resolution structure of the Escherichia coli ribosome | X-RAY DIFFRACTION | 2.1 | 118 |
| 2 | 6PJ6|1|J | High resolution cryo-EM structure of E.coli 50S | ELECTRON MICROSCOPY | 2.2 | 118 |
| 3 | 6PCR|1|J | E. coli 50S ribosome bound to compound 40o | ELECTRON MICROSCOPY | 2.5 | 118 |
| 4 | 6PC6|1|J | E. coli 50S ribosome bound to compound 47 | ELECTRON MICROSCOPY | 2.5 | 118 |
| 5 | 6PC7|1|J | E. coli 50S ribosome bound to compound 46 | ELECTRON MICROSCOPY | 2.5 | 118 |
| 6 | 6XZ7|1|B | E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet). | ELECTRON MICROSCOPY | 2.1 | 120 |
| 7 | 4YBB|1|DB | High-resolution structure of the Escherichia coli ribosome | X-RAY DIFFRACTION | 2.1 | 120 |