#IFECompound(s)RNA source organismTitleMethodResolutionDate
14YBB|1|DB (rep)5S rRNAEscherichia coliHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.12015-03-18
24YBB|1|CB5S rRNAEscherichia coliHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.12015-03-18
37K00|1|b5S rRNAEscherichia coliStructure of the Bacterial Ribosome at 2 Angstrom ResolutionELECTRON MICROSCOPY1.982020-09-23
46XZ7|1|B5S rRNAEscherichia coliE. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).ELECTRON MICROSCOPY2.12020-07-22
57LVK|1|J5S rRNAEscherichia coliCfr-modified 50S subunit from Escherichia coliELECTRON MICROSCOPY2.22021-12-15
66PJ6|1|J5S rRNAEscherichia coliHigh resolution cryo-EM structure of E.coli 50SELECTRON MICROSCOPY2.22020-01-22
77N1P|1|55S rRNAEscherichia coli K-12Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformationELECTRON MICROSCOPY2.332021-07-14
87PJS|1|B5S ribosomal RNAEscherichia coliStructure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)ELECTRON MICROSCOPY2.352021-10-20
97O1A|1|BBRibosomal RNA 5SEscherichia coli K-12Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophanELECTRON MICROSCOPY2.42021-09-01
107S1H|1|J5S rRNAEscherichia coliWild-type Escherichia coli ribosome with antibiotic linezolidELECTRON MICROSCOPY2.352021-11-17
117S1K|1|J5S rRNAEscherichia coliCfr-modified Escherichia coli stalled ribosome with antibiotic radezolidELECTRON MICROSCOPY2.422022-01-19
127BL4|1|B5S ribosomal RNAEscherichia coli K-12in vitro reconstituted 50S-ObgE-GMPPNP-RsfS particleELECTRON MICROSCOPY2.42021-05-12
137S1G|1|J5S rRNAEscherichia coliwild-type Escherichia coli stalled ribosome with antibiotic linezolidELECTRON MICROSCOPY2.482021-11-17
146PC6|1|J5S ribosomal RNAEscherichia coliE. coli 50S ribosome bound to compound 47ELECTRON MICROSCOPY2.52020-06-17
156PCR|1|J5S ribosomal RNAEscherichia coliE. coli 50S ribosome bound to compound 40oELECTRON MICROSCOPY2.52020-06-17
166PC7|1|J5S ribosomal RNAEscherichia coliE. coli 50S ribosome bound to compound 46ELECTRON MICROSCOPY2.52020-06-17

Release history

Release3.219
Date2022-02-23

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_2.5_10157.88NR_2.5_10157.873.219(16) 4YBB|1|CB, 7S1H|1|J, 7S1G|1|J, 7PJS|1|B, 7O1A|1|BB, 7N1P|1|5, 7LVK|1|J, 7K00|1|b, 7BL4|1|B, 6XZ7|1|B, 6PJ6|1|J, 6PCR|1|J, 6PC7|1|J, 6PC6|1|J, 4YBB|1|DB, 7S1K|1|J(0) (0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_2.5_10157.88NR_2.5_10157.893.220(16) 6PC6|1|J, 7N1P|1|5, 4YBB|1|DB, 7LVK|1|J, 4YBB|1|CB, 7K00|1|b, 7BL4|1|B, 7S1K|1|J, 6XZ7|1|B, 7S1H|1|J, 6PJ6|1|J, 7S1G|1|J, 6PCR|1|J, 7PJS|1|B, 6PC7|1|J, 7O1A|1|BB(0) (2) 7S1J|1|J, 7S1I|1|J

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
17BL4|1|Bin vitro reconstituted 50S-ObgE-GMPPNP-RsfS particleELECTRON MICROSCOPY2.4119
26PC7|1|JE. coli 50S ribosome bound to compound 46ELECTRON MICROSCOPY2.5118
36PC6|1|JE. coli 50S ribosome bound to compound 47ELECTRON MICROSCOPY2.5118
46PCR|1|JE. coli 50S ribosome bound to compound 40oELECTRON MICROSCOPY2.5118
57S1G|1|Jwild-type Escherichia coli stalled ribosome with antibiotic linezolidELECTRON MICROSCOPY2.48118
67S1H|1|JWild-type Escherichia coli ribosome with antibiotic linezolidELECTRON MICROSCOPY2.35118
77S1K|1|JCfr-modified Escherichia coli stalled ribosome with antibiotic radezolidELECTRON MICROSCOPY2.42118
87O1A|1|BBCryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophanELECTRON MICROSCOPY2.4120
96XZ7|1|BE. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).ELECTRON MICROSCOPY2.1120
107K00|1|bStructure of the Bacterial Ribosome at 2 Angstrom ResolutionELECTRON MICROSCOPY1.98119
117N1P|1|5Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformationELECTRON MICROSCOPY2.33120
127LVK|1|JCfr-modified 50S subunit from Escherichia coliELECTRON MICROSCOPY2.2118
136PJ6|1|JHigh resolution cryo-EM structure of E.coli 50SELECTRON MICROSCOPY2.2118
144YBB|1|CBHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.1118
154YBB|1|DBHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.1120
167PJS|1|BStructure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)ELECTRON MICROSCOPY2.35120