Equivalence class NR_2.5_17996.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4J7L|1|B (rep) | RNA (5'-R(P*UP*UP*UP*UP*U)-3') | synthetic construct | Crystal structure of mouse DXO in complex with PRODUCT RNA AND two MAGNESIUM ions | X-ray diffraction | 1.8 | 2013-03-27 | |||
| 2 | 5W0M|1|J | U5 single-stranded RNA | synthetic construct | Structure of human TUT7 catalytic module (CM) in complex with U5 RNA | X-ray diffraction | 2.3 | 2017-06-28 | |||
| 3 | 5BUD|1|E | RNA (5'-R(P*UP*UP*UP*U)-3') | Candida albicans | Crystal structure of Candida albicans Rai1 in complex with pU5-Mn2+ | X-ray diffraction | 1.99 | 2015-07-08 | |||
| 4 | 5W0M|1|I | U5 single-stranded RNA | synthetic construct | Structure of human TUT7 catalytic module (CM) in complex with U5 RNA | X-ray diffraction | 2.3 | 2017-06-28 | |||
| 5 | 5W0M|1|H | U5 single-stranded RNA | synthetic construct | Structure of human TUT7 catalytic module (CM) in complex with U5 RNA | X-ray diffraction | 2.3 | 2017-06-28 | |||
| 6 | 4J7M|1|B | RNA (5'-R(P*UP*(U37)P*(U37)P*UP*U)-3') | synthetic construct | Crystal structure of mouse DXO in complex with substrate mimic RNA and calcium ion | X-ray diffraction | 1.7 | 2013-03-27 | |||
| 7 | 5BUD|1|D | RNA (5'-R(P*UP*UP*UP*U)-3') | Candida albicans | Crystal structure of Candida albicans Rai1 in complex with pU5-Mn2+ | X-ray diffraction | 1.99 | 2015-07-08 | |||
| 8 | 6A4E|1|B | RNA (5'-R(P*UP*UP*UP*UP*U)-3') | synthetic construct | Two linked uridine bound Oligoribonuclease (ORN) from Colwellia psychrerythraea strain 34H | X-ray diffraction | 2.45 | 2019-03-13 | |||
| 9 | 6A4E|1|D | RNA (5'-R(P*UP*UP*UP*UP*U)-3') | synthetic construct | Two linked uridine bound Oligoribonuclease (ORN) from Colwellia psychrerythraea strain 34H | X-ray diffraction | 2.45 | 2019-03-13 |
Release history
Parents
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 5W0M|1|H | Structure of human TUT7 catalytic module (CM) in complex with U5 RNA | X-RAY DIFFRACTION | 2.3 | 4 |
| 2 | 5W0M|1|I | Structure of human TUT7 catalytic module (CM) in complex with U5 RNA | X-RAY DIFFRACTION | 2.3 | 4 |
| 3 | 5W0M|1|J | Structure of human TUT7 catalytic module (CM) in complex with U5 RNA | X-RAY DIFFRACTION | 2.3 | 4 |
| 4 | 5BUD|1|D | Crystal structure of Candida albicans Rai1 in complex with pU5-Mn2+ | X-RAY DIFFRACTION | 1.99 | 4 |
| 5 | 5BUD|1|E | Crystal structure of Candida albicans Rai1 in complex with pU5-Mn2+ | X-RAY DIFFRACTION | 1.99 | 5 |
| 6 | 4J7L|1|B | Crystal structure of mouse DXO in complex with PRODUCT RNA AND two MAGNESIUM ions | X-RAY DIFFRACTION | 1.8 | 5 |
| 7 | 4J7M|1|B | Crystal structure of mouse DXO in complex with substrate mimic RNA and calcium ion | X-RAY DIFFRACTION | 1.7 | 3 |
| 8 | 6A4E|1|B | Two linked uridine bound Oligoribonuclease (ORN) from Colwellia psychrerythraea strain 34H | X-RAY DIFFRACTION | 2.45 | 2 |
| 9 | 6A4E|1|D | Two linked uridine bound Oligoribonuclease (ORN) from Colwellia psychrerythraea strain 34H | X-RAY DIFFRACTION | 2.45 | 2 |