#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
16D30|1|C (rep)RNA (5'-R(UP*U)-3')synthetic constructStructure of human Usb1 with uridine-uridine, inactive H208Q mutantX-ray diffraction1.172018-09-05
23ER9|1|D5'-R(UP*U)-3'Crystal structure of the heterodimeric vaccinia virus mRNA polyadenylate polymerase complex with UU and 3'-deoxy ATPX-ray diffraction2.062009-06-16
34NIA|1|3RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
44NIA|1|7RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
54NIA|1|4RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
64NIA|1|vRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
74NIA|1|uRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
84NIA|1|6RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
94OQ9|1|7RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
104NIA|1|xRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
114NIA|1|1RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
124OQ9|1|4RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
134NIA|1|8RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
144OQ9|1|8RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
154OQ9|1|tRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
164OQ9|1|yRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
174NIA|1|5RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
184OQ9|1|xRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
194NIA|1|wRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
204NIA|1|tRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
214OQ9|1|6RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
224OQ8|1|DRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using icosahedral constraintsX-ray diffraction1.452014-09-10
234NIA|1|zRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
244OQ9|1|wRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
254OQ9|1|5RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
264NIA|1|yRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
274NIA|1|2RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
284OQ9|1|uRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
294OQ9|1|zRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
304OQ9|1|2RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
314OQ9|1|vRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
324OQ9|1|3RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
334OQ9|1|1RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10

Release history

Release3.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.763.773.783.793.803.813.823.833.843.853.863.873.88
Date2018-09-072018-09-142018-09-212018-09-282018-10-052018-10-122018-10-192018-10-262018-11-022018-11-092018-11-162018-11-232018-11-302018-12-072018-12-142018-12-212018-12-282019-01-042019-01-112019-01-182019-01-252019-02-012019-02-082019-02-152019-02-222019-03-012019-03-082019-03-152019-03-222019-03-292019-04-052019-04-122019-04-192019-04-262019-05-032019-05-102019-05-172019-05-242019-05-312019-06-072019-06-142019-06-212019-06-282019-07-052019-07-122019-07-192019-07-262019-08-022019-08-092019-08-162019-08-23

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
14OQ9|1|uSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
23ER9|1|DCrystal structure of the heterodimeric vaccinia virus mRNA polyadenylate polymerase complex with UU and 3'-deoxy ATPX-RAY DIFFRACTION2.062
34OQ9|1|6Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
44NIA|1|5Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
54NIA|1|6Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
64NIA|1|7Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
74NIA|1|8Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
84NIA|1|ySatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
94OQ9|1|8Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
104NIA|1|uSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
114OQ9|1|7Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
124OQ9|1|ySatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
134OQ9|1|zSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
144OQ9|1|1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
154OQ9|1|4Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
164NIA|1|zSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
174NIA|1|1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
184OQ9|1|5Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
194NIA|1|4Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
204OQ9|1|tSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
214OQ9|1|3Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
224NIA|1|xSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
234OQ9|1|xSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
244NIA|1|3Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
254OQ9|1|vSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
264NIA|1|wSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
274OQ9|1|2Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
284NIA|1|2Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
294NIA|1|tSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
304NIA|1|vSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
314OQ9|1|wSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
326D30|1|CStructure of human Usb1 with uridine-uridine, inactive H208Q mutantX-RAY DIFFRACTION1.172
334OQ8|1|DSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using icosahedral constraintsX-RAY DIFFRACTION1.452

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


Coloring options:

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