#IFECompound(s)RNA source organismTitleMethodResolutionDate
17RQ8|1|1x (rep)P-site tRNA, mRNAEscherichia coliCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.52021-10-13
26XHW|1|1xP-site tRNA, mRNAEscherichia coliCrystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.52020-12-23
37RQ8|1|2xP-site tRNA, mRNAEscherichia coliCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.52021-10-13
46XHV|1|1xP-site tRNA, mRNAEscherichia coliCrystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-RAY DIFFRACTION2.42020-12-23
56XHW|1|2xP-site tRNA, mRNAEscherichia coliCrystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.52020-12-23
66XHV|1|2xP-site tRNA, mRNAEscherichia coliCrystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-RAY DIFFRACTION2.42020-12-23
74Y4P|1|1xP-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.52015-03-18
84W2F|1|AXE-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.42014-10-15
94W2F|1|CXE-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.42014-10-15
104Y4P|1|2xP-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.52015-03-18
117K00|1|ZP-site tRNA-fMet, mRNAEscherichia coliStructure of the Bacterial Ribosome at 2 Angstrom ResolutionELECTRON MICROSCOPY1.982020-09-23
126XZ7|1|fDeacylated tRNAi(Met)Escherichia coliE. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).ELECTRON MICROSCOPY2.12020-07-22
136YSI|1|8+ 6YSI|1|6E-site tRNAAcinetobacter baumanniiAcinetobacter baumannii ribosome-tigecycline complex - 50S subunitELECTRON MICROSCOPY2.52020-09-16

Release history

Release3.2013.2023.2033.204
Date2021-10-202021-10-272021-11-032021-11-10

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_2.5_35542.84NR_2.5_35542.833.201(13) 4W2F|1|AX, 7RQ8|1|1x, 7K00|1|Z, 6YSI|1|8+6YSI|1|6, 6XZ7|1|f, 6XHW|1|2x, 6XHW|1|1x, 6XHV|1|2x, 6XHV|1|1x, 4Y4P|1|2x, 4Y4P|1|1x, 4W2F|1|CX, 7RQ8|1|2x(0) (0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_2.5_35542.84NR_2.5_35542.853.205(13) 4W2F|1|AX, 7RQ8|1|1x, 7K00|1|Z, 6YSI|1|8+6YSI|1|6, 6XZ7|1|f, 6XHW|1|2x, 6XHW|1|1x, 6XHV|1|2x, 6XHV|1|1x, 4Y4P|1|2x, 4Y4P|1|1x, 4W2F|1|CX, 7RQ8|1|2x(0) (0)

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
14W2F|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.472
24Y4P|1|2xCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.572
37RQ8|1|2xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.571
47RQ8|1|1xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.571
56XHV|1|1xCrystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-RAY DIFFRACTION2.471
66XHV|1|2xCrystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-RAY DIFFRACTION2.471
76XHW|1|2xCrystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.571
86XHW|1|1xCrystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.571
94Y4P|1|1xCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.572
104W2F|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.472
116XZ7|1|fE. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).ELECTRON MICROSCOPY2.172
127K00|1|ZStructure of the Bacterial Ribosome at 2 Angstrom ResolutionELECTRON MICROSCOPY1.9876
136YSI|1|8+6YSI|1|6Acinetobacter baumannii ribosome-tigecycline complex - 50S subunitELECTRON MICROSCOPY2.58