#IFECompound(s)RNA source organismTitleMethodResolutionDate
12GDI|1|X (rep)TPP riboswitchCrystal structure of thiamine pyrophosphate-specific riboswitch in complex with thiamine pyrophosphateX-RAY DIFFRACTION2.052006-07-04
22GDI|1|YTPP riboswitchCrystal structure of thiamine pyrophosphate-specific riboswitch in complex with thiamine pyrophosphateX-RAY DIFFRACTION2.052006-07-04
37TDA|1|AthiM TPP riboswitch RNA (80-MER)Escherichia coliCrystal structure of the E. coli thiM riboswitch in complex with thiamine pyrophosphate, manganese ionsX-RAY DIFFRACTION2.252022-02-16
42HOJ|1|Athi-box riboswitchCrystal structure of an E. coli thi-box riboswitch bound to thiamine pyrophosphate, manganese ionsX-RAY DIFFRACTION2.52006-09-19
57TDC|1|AthiM riboswitch RNA (83-MER)Escherichia coliCrystal structure of the E. coli thiM riboswitch in complex with thiamine bisphosphonate, calcium ionsX-RAY DIFFRACTION2.462022-02-16

Release history

Release3.2183.2193.2203.2213.2223.2233.2243.2253.2263.2273.2283.2293.2303.231
Date2022-02-162022-02-232022-03-022022-03-092022-03-162022-03-232022-03-302022-04-062022-04-132022-04-202022-04-272022-05-042022-05-112022-05-18

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_2.5_42241.2NR_2.5_42241.13.218(3) 2HOJ|1|A, 2GDI|1|Y, 2GDI|1|X(2) 7TDC|1|A, 7TDA|1|A(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_2.5_42241.2NR_2.5_42241.33.232(5) 7TDC|1|A, 7TDA|1|A, 2HOJ|1|A, 2GDI|1|Y, 2GDI|1|X(0) (2) 7TZS|1|Y, 7TZS|1|X

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
12HOJ|1|ACrystal structure of an E. coli thi-box riboswitch bound to thiamine pyrophosphate, manganese ionsX-RAY DIFFRACTION2.578
27TDA|1|ACrystal structure of the E. coli thiM riboswitch in complex with thiamine pyrophosphate, manganese ionsX-RAY DIFFRACTION2.2579
37TDC|1|ACrystal structure of the E. coli thiM riboswitch in complex with thiamine bisphosphonate, calcium ionsX-RAY DIFFRACTION2.4679
42GDI|1|XCrystal structure of thiamine pyrophosphate-specific riboswitch in complex with thiamine pyrophosphateX-RAY DIFFRACTION2.0578
52GDI|1|YCrystal structure of thiamine pyrophosphate-specific riboswitch in complex with thiamine pyrophosphateX-RAY DIFFRACTION2.0578