BGSU RNA Site //

Equivalence class NR_2.5_51779.3 Obsolete

#IFEStandardized nameMoleculeOrganismDomainRfamTitleMethodÅDate
11Z7F|1|A (rep)5'-R(*GP*CP*AP*GP*AP*CP*UP*UP*AP*AP*AP*UP*CP*UP*GP*C)-3'Crystal structure of 16 base pair RNA duplex containing a C-A mismatchX-ray diffraction2.12005-10-18
2405D|1|A+ 405D|1|BRNA (5'-R(*GP*CP*AP*GP*AP*CP*UP*UP*AP*AP*AP*UP*CP*UP*GP*C)-3')STRUCTURE OF A 16-MER RNA DUPLEX R(GCAGACUUAAAUCUGC)2 WITH WOBBLE LIKE A.C MISMATCHESX-ray diffraction2.51999-01-13

Release history

Release2.1322.1332.1342.1352.1362.1372.1382.1392.1402.1412.1422.1432.1442.1452.1462.1472.1482.1492.1502.1512.152
Date2017-06-212017-06-242017-06-282017-07-042017-07-102017-07-152017-07-262017-07-312017-08-052017-08-122017-08-192017-08-262017-09-032017-09-092017-09-162017-09-232017-09-302017-10-072017-10-142017-10-212017-10-28

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_2.5_51779.3NR_2.5_51779.22.132(2) 405D|1|A+405D|1|B, 1Z7F|1|A(0) (2) 1YRM|1|C, 1YRM|1|A+1YRM|1|B

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_2.5_51779.3NR_2.5_51779.42.153(2) 1Z7F|1|A, 405D|1|A+405D|1|B(0) (2) 1YRM|1|A+1YRM|1|B, 1YRM|1|C

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
11Z7F|1|ACrystal structure of 16 base pair RNA duplex containing a C-A mismatchX-RAY DIFFRACTION2.116
2405D|1|A+405D|1|BSTRUCTURE OF A 16-MER RNA DUPLEX R(GCAGACUUAAAUCUGC)2 WITH WOBBLE LIKE A.C MISMATCHESX-RAY DIFFRACTION2.516