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Equivalence class NR_2.5_56726.78 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
14YBB|1|AA (rep)Small subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.12015-03-18
24YBB|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.12015-03-18
37K00|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the Bacterial Ribosome at 2 Angstrom ResolutionElectron microscopy1.982020-09-23
47S1H|1|CSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Wild-type Escherichia coli ribosome with antibiotic linezolidElectron microscopy2.352021-11-17
57N1P|1|16Small subunit ribosomal RNA16S rRNA, mRNAEscherichia coli K-12BacteriaRF00177Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformationElectron microscopy2.332021-07-14
67S1G|1|CSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177wild-type Escherichia coli stalled ribosome with antibiotic linezolidElectron microscopy2.482021-11-17
77O1A|1|AASmall subunit ribosomal RNARibosomal RNA 16SEscherichia coli K-12BacteriaRF00177Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophanElectron microscopy2.42021-09-01
87PJS|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)Electron microscopy2.352021-10-20

Release history

Release3.2093.2103.2113.2123.213
Date2021-12-152021-12-222021-12-292022-01-052022-01-12

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_2.5_56726.78NR_2.5_56726.773.209(8) 4YBB|1|AA, 4YBB|1|BA, 7K00|1|A, 7N1P|1|16, 7O1A|1|AA, 7PJS|1|a, 7S1G|1|C, 7S1H|1|C(0) (0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_2.5_56726.78NR_2.5_56726.793.214(8) 7S1H|1|C, 7S1G|1|C, 7PJS|1|a, 7O1A|1|AA, 7N1P|1|16, 7K00|1|A, 4YBB|1|BA, 4YBB|1|AA(0) (1) 7S1K|1|C

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
17PJS|1|aStructure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)ELECTRON MICROSCOPY2.35660
27K00|1|AStructure of the Bacterial Ribosome at 2 Angstrom ResolutionELECTRON MICROSCOPY1.981508
37N1P|1|16Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformationELECTRON MICROSCOPY2.331531
47O1A|1|AACryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophanELECTRON MICROSCOPY2.41523
57S1G|1|Cwild-type Escherichia coli stalled ribosome with antibiotic linezolidELECTRON MICROSCOPY2.481540
67S1H|1|CWild-type Escherichia coli ribosome with antibiotic linezolidELECTRON MICROSCOPY2.351540
74YBB|1|BAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.11522
84YBB|1|AAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.11523
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