Equivalence class NR_2.5_65061.17 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 8A3D|1|A+ 8A3D|1|C (rep) | Large subunit ribosomal RNA + 5.8S ribosomal RNA | 28S ribosomal RNA, 5.8S ribosomal RNA | Homo sapiens | Eukarya | RF02543 + RF00002 | Human mature large subunit of the ribosome with eIF6 and homoharringtonine bound | Electron microscopy | 1.67 | 2023-03-08 |
| 2 | 7OW7|1|A+ 7OW7|1|C | Large subunit ribosomal RNA + 5.8S ribosomal RNA | 28S rRNA, 5.8S ribosomal RNA | Homo sapiens | Eukarya | RF02543 + RF00002 | EIF6-bound large subunit of the human ribosome | Electron microscopy | 2.2 | 2022-10-05 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_2.5_65061.17 | NR_2.5_65061.16 | 3.273 | (1) 7OW7|1|A+7OW7|1|C | (1) 8A3D|1|A+8A3D|1|C | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_2.5_65061.17 | NR_2.5_65061.18 | 3.277 | (2) 8A3D|1|A+8A3D|1|C, 7OW7|1|A+7OW7|1|C | (0) | (1) 7XNY|1|L1+7XNY|1|L3 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 8A3D|1|A+8A3D|1|C | Human mature large subunit of the ribosome with eIF6 and homoharringtonine bound | ELECTRON MICROSCOPY | 1.67 | 3190 |
| 2 | 7OW7|1|A+7OW7|1|C | EIF6-bound large subunit of the human ribosome | ELECTRON MICROSCOPY | 2.2 | 3190 |