Equivalence class NR_2.5_70532.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 2OEU|1|A (rep) | Hammerhead Ribozyme, 5'-R(*GP*GP*CP*GP*UP*(OMC)P*CP*UP*GP*GP*(5BU)P*AP*UP*CP*CP*AP*AP*UP*CP*(DC))-3' | Full-length hammerhead ribozyme with Mn(II) bound | X-ray diffraction | 2 | 2007-02-20 | ||||
| 2 | 3ZP8|1|A | HAMMERHEAD RIBOZYME, ENZYME STRAND | synthetic construct | HIGH-RESOLUTION FULL-LENGTH HAMMERHEAD RIBOZYME | X-ray diffraction | 1.55 | 2013-03-06 | |||
| 3 | 3ZD4|1|A | HAMMERHEAD RIBOZYME, ENZYME STRAND | synthetic construct | Full-Length Hammerhead Ribozyme with G12A substitution at the general base position | X-ray diffraction | 2.2 | 2012-12-12 | |||
| 4 | 3ZD5|1|A | HAMMERHEAD RIBOZYME, ENZYME STRAND | synthetic construct | THE 2.2 A STRUCTURE OF A FULL-LENGTH CATALYTICALLY ACTIVE HAMMERHEAD RIBOZYME | X-ray diffraction | 2.2 | 2012-12-12 | |||
| 5 | 3ZD3|1|A | HAMMERHEAD RIBOZYME, ENZYME STRAND, HAMMERHEAD RIBOZYME, SUBTRATE STRAND | High-resolution full-length hammerhead ribozyme in the presence of Mg ion. | X-ray diffraction | 1.55 | 2012-12-12 | ||||
| 6 | 2GOZ|1|A | Ribozyme, 5'-R(*GP*GP*CP*GP*UP*(OMC)P*CP*UP*GP*GP*(5BU)P*AP*UP*CP*CP*AP*AP*(5BU)P*CP*(DC))-3' | The 2.2 A structure of a full-length catalytically active hammerhead ribozyme | X-ray diffraction | 2.2 | 2006-07-18 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 3ZD4|1|A | Full-Length Hammerhead Ribozyme with G12A substitution at the general base position | X-RAY DIFFRACTION | 2.2 | 42 |
| 2 | 3ZP8|1|A | HIGH-RESOLUTION FULL-LENGTH HAMMERHEAD RIBOZYME | X-RAY DIFFRACTION | 1.55 | 42 |
| 3 | 3ZD3|1|A | High-resolution full-length hammerhead ribozyme in the presence of Mg ion. | X-RAY DIFFRACTION | 1.55 | 42 |
| 4 | 2OEU|1|A | Full-length hammerhead ribozyme with Mn(II) bound | X-RAY DIFFRACTION | 2 | 42 |
| 5 | 3ZD5|1|A | THE 2.2 A STRUCTURE OF A FULL-LENGTH CATALYTICALLY ACTIVE HAMMERHEAD RIBOZYME | X-RAY DIFFRACTION | 2.2 | 42 |
| 6 | 2GOZ|1|A | The 2.2 A structure of a full-length catalytically active hammerhead ribozyme | X-RAY DIFFRACTION | 2.2 | 42 |