NR_2.5_73827.2

Members (14)
History
Heat map

#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	#NTs	Date
1	4NLF\|1\|A (rep)		23S ribosomal RNA Sarcin Ricin Loop				2'-trifluoromethylthio-2'-deoxycytidine-modified SRL	X-ray diffraction	1	27	2014-11-19
2	480D\|1\|A		SARCIN/RICIN DOMAIN FROM 23 S RRNA				CRYSTAL STRUCTURE OF THE SARCIN/RICIN DOMAIN FROM E. COLI 23 S RRNA	X-ray diffraction	1.5	27	1999-10-08
3	3DW4\|1\|A		Sarcin/Ricin Domain from E. Coli 23 S rRNA				Crystal Structure of the Sarcin/Ricin Domain from E. COLI 23 S rRNA, U2650-OCH3 modified	X-ray diffraction	0.97	27	2009-03-24
4	1MSY\|1\|A		SARCIN/RICIN DOMAIN FROM 23 S RRNA				GUAA tetraloop mutant of Sarcin/Ricin domain from E. Coli 23 S rRNA	X-ray diffraction	1.41	27	2003-02-25
5	3DW6\|1\|A		Sarcin/Ricin Domain from E. Coli 23 S rRNA				Crystal Structure of the Sarcin/Ricin Domain from E. COLI 23 S rRNA, U2650-SECH3 modified	X-ray diffraction	1	27	2009-03-24
6	3DVZ\|1\|A		Sarcin/Ricin Domain from E. Coli 23 S rRNA				Crystal Structure of the Sarcin/Ricin Domain from E. coli 23 S rRNA	X-ray diffraction	1	27	2009-03-24
7	3S7C\|1\|A		Ecoli 23 S rRNA Sarcin Ricin loop				Crystal structure of a 2'-azido-uridine-modified RNA	X-ray diffraction	1.1	27	2012-04-11
8	4NXH\|1\|A		23S ribosomal RNA Sarcin Ricin Loop	Escherichia coli			2'-Trifluoromethylthiouridine-modified E. coli 23S rRNA Sarcin Ricin Loop	X-ray diffraction	1.16	27	2014-12-10
9	3S8U\|1\|A		Ecoli 23 S rRNA Sarcin Ricin loop	Escherichia coli			Crystal structure of a 2-azido-adenine-modified RNA	X-ray diffraction	1.2	27	2012-04-11
10	1Q9A\|1\|A		Sarcin/ricin 23S rRNA				Crystal structure of the sarcin/ricin domain from E.coli 23S rRNA at 1.04 resolution	X-ray diffraction	1.04	27	2003-11-25
11	483D\|1\|A		SARCIN/RICIN RRNA DOMAIN				CRYSTAL STRUCTURE OF THE SARCIN/RICIN DOMAIN FROM E. COLI 23 S RRNA	X-ray diffraction	1.11	27	1999-10-08
12	3DW5\|1\|A		Sarcin/Ricin Domain from E. Coli 23 S rRNA				Crystal Structure of the Sarcin/Ricin Domain from E. COLI 23S rRNA, U2656-OCH3 modified	X-ray diffraction	0.96	27	2009-03-24
13	4NMG\|1\|A		23S ribosomal RNA Sarcin Ricin Loop				2'-Trifluoromethylthio-2'-deoxyuridine-modified SRL	X-ray diffraction	1.01	27	2014-11-19
14	3DW7\|1\|A		Sarcin/Ricin Domain from E. Coli 23 S rRNA				Crystal Structure of the Sarcin/Ricin Domain from E. COLI 23 S rRNA, U2656-SeCH3 modified	X-ray diffraction	1	27	2009-03-24

Release history

Release	2.1	2.2	2.3	2.4	2.5	2.6	2.7	2.8	2.9	2.10	2.11	2.12	2.13	2.14	2.15	2.16	2.17	2.18	2.19	2.20	2.21	2.22	2.23	2.24	2.25	2.26	2.27	2.28	2.29	2.30	2.31	2.32	2.33	2.34	2.35	2.36	2.37	2.38	2.39	2.40	2.41	2.42	2.43	2.44	2.45	2.46	2.47	2.48	2.49
Date	2014-12-12	2014-12-19	2014-12-26	2015-01-02	2015-01-09	2015-01-16	2015-01-23	2015-01-30	2015-02-06	2015-02-13	2015-02-20	2015-02-27	2015-03-06	2015-03-13	2015-03-20	2015-03-27	2015-04-03	2015-04-10	2015-04-17	2015-04-24	2015-05-01	2015-05-08	2015-05-15	2015-05-22	2015-05-29	2015-06-05	2015-06-12	2015-06-19	2015-06-26	2015-07-03	2015-07-10	2015-07-17	2015-07-24	2015-07-31	2015-08-07	2015-08-14	2015-08-21	2015-08-28	2015-09-04	2015-09-11	2015-09-18	2015-09-25	2015-10-02	2015-10-09	2015-10-16	2015-10-23	2015-10-30	2015-11-06	2015-11-13

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent
NR_2.5_73827.2	NR_all_73827.1	2.1	(13) 1MSY\|1\|A, 1Q9A\|1\|A, 3DVZ\|1\|A, 3DW4\|1\|A, 3DW5\|1\|A, 3DW6\|1\|A, 3DW7\|1\|A, 3S7C\|1\|A, 3S8U\|1\|A, 480D\|1\|A, 483D\|1\|A, 4NLF\|1\|A, 4NMG\|1\|A	(1) 4NXH\|1\|A	(0)

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#S	View	PDB	Title	Method	Resolution	#NTs
1		4NLF\|1\|A	2'-trifluoromethylthio-2'-deoxycytidine-modified SRL	X-RAY DIFFRACTION	1	27
2		480D\|1\|A	CRYSTAL STRUCTURE OF THE SARCIN/RICIN DOMAIN FROM E. COLI 23 S RRNA	X-RAY DIFFRACTION	1.5	27
3		3S7C\|1\|A	Crystal structure of a 2'-azido-uridine-modified RNA	X-RAY DIFFRACTION	1.1	27
4		3DW6\|1\|A	Crystal Structure of the Sarcin/Ricin Domain from E. COLI 23 S rRNA, U2650-SECH3 modified	X-RAY DIFFRACTION	1	27
5		3DW4\|1\|A	Crystal Structure of the Sarcin/Ricin Domain from E. COLI 23 S rRNA, U2650-OCH3 modified	X-RAY DIFFRACTION	0.97	27
6		4NXH\|1\|A	2'-Trifluoromethylthiouridine-modified E. coli 23S rRNA Sarcin Ricin Loop	X-RAY DIFFRACTION	1.16	27
7		3DW7\|1\|A	Crystal Structure of the Sarcin/Ricin Domain from E. COLI 23 S rRNA, U2656-SeCH3 modified	X-RAY DIFFRACTION	1	27
8		4NMG\|1\|A	2'-Trifluoromethylthio-2'-deoxyuridine-modified SRL	X-RAY DIFFRACTION	1.01	27
9		3DW5\|1\|A	Crystal Structure of the Sarcin/Ricin Domain from E. COLI 23S rRNA, U2656-OCH3 modified	X-RAY DIFFRACTION	0.96	27
10		3S8U\|1\|A	Crystal structure of a 2-azido-adenine-modified RNA	X-RAY DIFFRACTION	1.2	27
11		3DVZ\|1\|A	Crystal Structure of the Sarcin/Ricin Domain from E. coli 23 S rRNA	X-RAY DIFFRACTION	1	27
12		1Q9A\|1\|A	Crystal structure of the sarcin/ricin domain from E.coli 23S rRNA at 1.04 resolution	X-RAY DIFFRACTION	1.04	27
13		483D\|1\|A	CRYSTAL STRUCTURE OF THE SARCIN/RICIN DOMAIN FROM E. COLI 23 S RRNA	X-RAY DIFFRACTION	1.11	27
14		1MSY\|1\|A	GUAA tetraloop mutant of Sarcin/Ricin domain from E. Coli 23 S rRNA	X-RAY DIFFRACTION	1.41	27

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

Coloring options: Nucleotide numbers

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