RNA 3D Hub //

Equivalence class NR_2.5_83717.123 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
14YBB|1|DA (rep)Large subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.12015-03-18
24YBB|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.12015-03-18
38B0X|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BBacteriaRF02541Translating 70S ribosome in the unrotated state (P and E, tRNAs)Electron microscopy1.552022-11-30
48CGK|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BW25113BacteriaRF02541Lincomycin and Avilamycin bound to the 50S subunitElectron microscopy1.642023-07-19
58CGV|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BW25113BacteriaRF02541Tiamulin bound to the 50S subunitElectron microscopy1.662023-08-02
68E30|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound streptogramin A analog 3142Electron microscopy1.912023-06-28
78CEU|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BW25113BacteriaRF02541Retapamulin and Capreomycin bound to the 50S subunitElectron microscopy1.832023-07-26
88FTO|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541E. coli 70S ribosome with an improved MS2 tag inserted in H98Electron microscopy1.852023-08-02
98E3O|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to solithromycin and VM1Electron microscopy1.992023-06-28
108E49|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to antibiotic analog SLC31Electron microscopy2.052023-06-28
118CAM|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BW25113BacteriaRF02541Evernimicin bound to the 50S subunitElectron microscopy1.862023-07-26
127QQ3|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF02541Cryo-EM structure of the E.coli 50S ribosomal subunit in complex with the antibiotic Myxovalargin A.Electron microscopy2.12023-01-18
138AYE|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541E. coli 70S ribosome bound to thermorubin and fMet-tRNAElectron microscopy1.962023-03-01
147ZP8|1|bLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S E. coli ribosome with a stalled filamin domain 5 nascent chainElectron microscopy2.22022-08-10
158E43|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound streptogramin A analog 3336Electron microscopy2.092023-06-28
167K00|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Bacterial Ribosome at 2 Angstrom ResolutionElectron microscopy1.982020-09-23
178CGD|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BW25113BacteriaRF02541Clindamycin bound to the 50S subunitElectron microscopy1.982023-07-26
188G6W|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPheElectron microscopy2.022023-04-05
198E41|1|ILarge subunit ribosomal RNA50S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to tiamulin and VS1Electron microscopy2.132023-06-28
208BIM|1|0Large subunit ribosomal RNA23S rRNA RRLG-RRNAEscherichia coli K-12BacteriaRF02541Initiation complex of the E. coli 70S ribosome with mRNA containing AAm6A codon in the A-siteElectron microscopy2.042023-08-16
218BIL|1|0Large subunit ribosomal RNA23S rRNA RRLG-RRNAEscherichia coli K-12BacteriaRF02541Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.Electron microscopy2.042023-08-16
226XZ7|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).Electron microscopy2.12020-07-22
237Z20|1|bLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chainElectron microscopy2.292022-08-10
247LVK|1|ILarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Cfr-modified 50S subunit from Escherichia coliElectron microscopy2.22021-12-15
256PJ6|1|ILarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541High resolution cryo-EM structure of E.coli 50SElectron microscopy2.22020-01-22
268G6Y|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site 3-aminopyridine-4-carboxylic acid charged NH-tRNAPheElectron microscopy2.092023-04-05
278EMM|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Composite 70S ribosome structure for "Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substratesElectron microscopy2.12023-05-31
288BGE|1|0Large subunit ribosomal RNA23S rRNA RRLG-RRNAEscherichia coli K-12BacteriaRF02541Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAm6A mRNA codon in the A-site after uncompleted di-peptide formationElectron microscopy2.112023-08-16
298E35|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound SAB002Electron microscopy2.272023-06-28
308ANA|1|aLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coli BW25113BacteriaRF02541Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the 50S ribosomal subunitElectron microscopy2.12023-03-08
317N1P|1|23Large subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformationElectron microscopy2.332021-07-14
328E48|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to antibiotic analog SLC30Electron microscopy2.272023-06-28
338E33|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound streptogramin analog SAB001Electron microscopy2.232023-06-28
347PJS|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)Electron microscopy2.352021-10-20
358E3M|1|ILarge subunit ribosomal RNA50S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to L-linker solithromycin conjugateElectron microscopy2.252023-06-28
367S1H|1|ILarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Wild-type Escherichia coli ribosome with antibiotic linezolidElectron microscopy2.352021-11-17
378E47|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to antibiotic analog SLC26Electron microscopy2.322023-06-28
388E45|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to antibiotic analog SLC17Electron microscopy2.32023-06-28
398E42|1|ILarge subunit ribosomal RNA50S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to tiamulin and azithromycinElectron microscopy2.292023-06-28
408E46|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to antibiotic analog SLC21Electron microscopy2.322023-06-28
418BHL|1|0Large subunit ribosomal RNA23S rRNA RRLG-RRNAEscherichia coli K-12BacteriaRF02541Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formationElectron microscopy2.212023-08-16
428E32|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound streptogramin analogs SA1 and SB1Electron microscopy2.352023-06-28
438E3L|1|ILarge subunit ribosomal RNA50S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to D-linker solithromycin conjugateElectron microscopy2.352023-06-28
447S1K|1|ILarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Cfr-modified Escherichia coli stalled ribosome with antibiotic radezolidElectron microscopy2.422022-01-19
457O1A|1|BALarge subunit ribosomal RNARibosomal RNA 23SEscherichia coli K-12BacteriaRF02541Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophanElectron microscopy2.42021-09-01
468EIU|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541E. coli 70S ribosome with A-loop mutations U2554C and U2555CElectron microscopy2.242023-02-01
477S1J|1|ILarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Wild-type Escherichia coli ribosome with antibiotic radezolidElectron microscopy2.472022-03-02
487S1I|1|ILarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Wild-type Escherichia coli stalled ribosome with antibiotic radezolidElectron microscopy2.482022-03-02
497S1G|1|ILarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541wild-type Escherichia coli stalled ribosome with antibiotic linezolidElectron microscopy2.482021-11-17
508E36|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound streptogramin A analog 3146Electron microscopy2.382023-06-28
518BF7|1|0Large subunit ribosomal RNA23S rRNA RRLG-RRNAEscherichia coli K-12BacteriaRF02541Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteElectron microscopy2.332023-08-16
528AKN|1|aLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coli BW25113BacteriaRF02541Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the terminating ribosomeElectron microscopy2.32023-03-08
538G6X|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site meta-aminobenzoic acid charged NH-tRNAPheElectron microscopy2.312023-03-22
547BL4|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF02541in vitro reconstituted 50S-ObgE-GMPPNP-RsfS particleElectron microscopy2.42021-05-12
557Y7G|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU)Electron microscopy2.342023-10-25
568BHP|1|0Large subunit ribosomal RNA23S rRNA RRLG-RRNAEscherichia coli K-12BacteriaRF02541Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formationElectron microscopy2.372023-08-16
577Y7E|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)Electron microscopy2.412023-10-25
586PCR|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound 40oElectron microscopy2.52020-06-17
597Y7F|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAC)Electron microscopy2.432023-10-25
606PC6|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound 47Electron microscopy2.52020-06-17
616PC7|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound 46Electron microscopy2.52020-06-17
628CGJ|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BW25113BacteriaRF02541Streptomycin bound to the 30S bodyElectron microscopy1.792023-07-26
638CGU|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BW25113BacteriaRF02541Gentamicin bound to the 30S bodyElectron microscopy1.892023-07-26
648CEP|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BW25113BacteriaRF02541Round2 30S head (no antibiotic)Electron microscopy2.042023-07-19
658CGR|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BW25113BacteriaRF02541Apramycin bound to the 30S bodyElectron microscopy2.122023-07-26

Release history

Release3.3063.3073.3083.3093.310
Date2023-10-252023-11-012023-11-082023-11-152023-11-24

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_2.5_83717.123NR_2.5_83717.1223.306(62) 4YBB|1|CA, 4YBB|1|DA, 6PC6|1|I, 6PC7|1|I, 6PCR|1|I, 6PJ6|1|I, 6XZ7|1|A, 7BL4|1|A, 7K00|1|a, 7LVK|1|I, 7N1P|1|23, 7O1A|1|BA, 7PJS|1|A, 7QQ3|1|I, 7S1G|1|I, 7S1H|1|I, 7S1I|1|I, 7S1J|1|I, 7S1K|1|I, 7Z20|1|b, 7ZP8|1|b, 8AKN|1|a, 8ANA|1|a, 8AYE|1|a, 8B0X|1|a, 8BF7|1|0, 8BGE|1|0, 8BHL|1|0, 8BHP|1|0, 8BIL|1|0, 8BIM|1|0, 8CAM|1|a, 8CEP|1|a, 8CEU|1|a, 8CGD|1|a, 8CGJ|1|a, 8CGK|1|a, 8CGR|1|a, 8CGU|1|a, 8CGV|1|a, 8E30|1|I, 8E32|1|I, 8E33|1|I, 8E35|1|I, 8E36|1|I, 8E3L|1|I, 8E3M|1|I, 8E3O|1|I, 8E41|1|I, 8E42|1|I, 8E43|1|I, 8E45|1|I, 8E46|1|I, 8E47|1|I, 8E48|1|I, 8E49|1|I, 8EIU|1|a, 8EMM|1|a, 8FTO|1|a, 8G6W|1|a, 8G6X|1|a, 8G6Y|1|a(3) 7Y7E|1|a, 7Y7F|1|a, 7Y7G|1|a(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_2.5_83717.123NR_2.5_83717.1243.311(65) 4YBB|1|CA, 4YBB|1|DA, 6PC6|1|I, 6PC7|1|I, 6PCR|1|I, 6PJ6|1|I, 6XZ7|1|A, 7BL4|1|A, 7K00|1|a, 7LVK|1|I, 7N1P|1|23, 7O1A|1|BA, 7PJS|1|A, 7QQ3|1|I, 7S1G|1|I, 7S1H|1|I, 7S1I|1|I, 7S1J|1|I, 7S1K|1|I, 7Y7E|1|a, 7Y7F|1|a, 7Y7G|1|a, 7Z20|1|b, 7ZP8|1|b, 8AKN|1|a, 8ANA|1|a, 8AYE|1|a, 8B0X|1|a, 8BF7|1|0, 8BGE|1|0, 8BHL|1|0, 8BHP|1|0, 8BIL|1|0, 8BIM|1|0, 8CAM|1|a, 8CEP|1|a, 8CEU|1|a, 8CGD|1|a, 8CGJ|1|a, 8CGK|1|a, 8CGR|1|a, 8CGU|1|a, 8CGV|1|a, 8E30|1|I, 8E32|1|I, 8E33|1|I, 8E35|1|I, 8E36|1|I, 8E3L|1|I, 8E3M|1|I, 8E3O|1|I, 8E41|1|I, 8E42|1|I, 8E43|1|I, 8E45|1|I, 8E46|1|I, 8E47|1|I, 8E48|1|I, 8E49|1|I, 8EIU|1|a, 8EMM|1|a, 8FTO|1|a, 8G6W|1|a, 8G6X|1|a, 8G6Y|1|a(0) (0)

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
18BF7|1|0Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteELECTRON MICROSCOPY2.332758
28BHL|1|0Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formationELECTRON MICROSCOPY2.212758
38BGE|1|0Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAm6A mRNA codon in the A-site after uncompleted di-peptide formationELECTRON MICROSCOPY2.112758
48BIL|1|0Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.ELECTRON MICROSCOPY2.042758
58BIM|1|0Initiation complex of the E. coli 70S ribosome with mRNA containing AAm6A codon in the A-siteELECTRON MICROSCOPY2.042758
68BHP|1|0Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formationELECTRON MICROSCOPY2.372758
78E35|1|IE. coli 50S ribosome bound to compound SAB002ELECTRON MICROSCOPY2.272880
88E47|1|IE. coli 50S ribosome bound to antibiotic analog SLC26ELECTRON MICROSCOPY2.322883
98E48|1|IE. coli 50S ribosome bound to antibiotic analog SLC30ELECTRON MICROSCOPY2.272886
108E3L|1|IE. coli 50S ribosome bound to D-linker solithromycin conjugateELECTRON MICROSCOPY2.352876
118E32|1|IE. coli 50S ribosome bound to compound streptogramin analogs SA1 and SB1ELECTRON MICROSCOPY2.352880
128E46|1|IE. coli 50S ribosome bound to antibiotic analog SLC21ELECTRON MICROSCOPY2.322876
138E45|1|IE. coli 50S ribosome bound to antibiotic analog SLC17ELECTRON MICROSCOPY2.32878
148E49|1|IE. coli 50S ribosome bound to antibiotic analog SLC31ELECTRON MICROSCOPY2.052883
158E42|1|IE. coli 50S ribosome bound to tiamulin and azithromycinELECTRON MICROSCOPY2.292877
168E41|1|IE. coli 50S ribosome bound to tiamulin and VS1ELECTRON MICROSCOPY2.132877
178E3M|1|IE. coli 50S ribosome bound to L-linker solithromycin conjugateELECTRON MICROSCOPY2.252877
188E30|1|IE. coli 50S ribosome bound to compound streptogramin A analog 3142ELECTRON MICROSCOPY1.912877
198E36|1|IE. coli 50S ribosome bound to compound streptogramin A analog 3146ELECTRON MICROSCOPY2.382876
208E33|1|IE. coli 50S ribosome bound to compound streptogramin analog SAB001ELECTRON MICROSCOPY2.232878
218E43|1|IE. coli 50S ribosome bound to compound streptogramin A analog 3336ELECTRON MICROSCOPY2.092882
226PC6|1|IE. coli 50S ribosome bound to compound 47ELECTRON MICROSCOPY2.52876
236PCR|1|IE. coli 50S ribosome bound to compound 40oELECTRON MICROSCOPY2.52876
246PC7|1|IE. coli 50S ribosome bound to compound 46ELECTRON MICROSCOPY2.52876
258E3O|1|IE. coli 50S ribosome bound to solithromycin and VM1ELECTRON MICROSCOPY1.992876
266PJ6|1|IHigh resolution cryo-EM structure of E.coli 50SELECTRON MICROSCOPY2.22874
277LVK|1|ICfr-modified 50S subunit from Escherichia coliELECTRON MICROSCOPY2.22876
284YBB|1|CAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.12876
297Y7F|1|aStructure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAC)ELECTRON MICROSCOPY2.432729
307Y7E|1|aStructure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)ELECTRON MICROSCOPY2.412729
317Y7G|1|aStructure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU)ELECTRON MICROSCOPY2.342729
327O1A|1|BACryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophanELECTRON MICROSCOPY2.42874
338B0X|1|aTranslating 70S ribosome in the unrotated state (P and E, tRNAs)ELECTRON MICROSCOPY1.552724
347S1K|1|ICfr-modified Escherichia coli stalled ribosome with antibiotic radezolidELECTRON MICROSCOPY2.422875
357S1H|1|IWild-type Escherichia coli ribosome with antibiotic linezolidELECTRON MICROSCOPY2.352876
367S1G|1|Iwild-type Escherichia coli stalled ribosome with antibiotic linezolidELECTRON MICROSCOPY2.482874
377S1I|1|IWild-type Escherichia coli stalled ribosome with antibiotic radezolidELECTRON MICROSCOPY2.482874
387S1J|1|IWild-type Escherichia coli ribosome with antibiotic radezolidELECTRON MICROSCOPY2.472876
398EIU|1|aE. coli 70S ribosome with A-loop mutations U2554C and U2555CELECTRON MICROSCOPY2.242729
407K00|1|aStructure of the Bacterial Ribosome at 2 Angstrom ResolutionELECTRON MICROSCOPY1.982729
418EMM|1|aComposite 70S ribosome structure for "Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substratesELECTRON MICROSCOPY2.12729
428G6X|1|aStructure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site meta-aminobenzoic acid charged NH-tRNAPheELECTRON MICROSCOPY2.312729
438G6W|1|aStructure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPheELECTRON MICROSCOPY2.022732
448G6Y|1|aStructure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site 3-aminopyridine-4-carboxylic acid charged NH-tRNAPheELECTRON MICROSCOPY2.092729
458AYE|1|aE. coli 70S ribosome bound to thermorubin and fMet-tRNAELECTRON MICROSCOPY1.962731
468CGV|1|aTiamulin bound to the 50S subunitELECTRON MICROSCOPY1.662666
478ANA|1|aCryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the 50S ribosomal subunitELECTRON MICROSCOPY2.12714
488AKN|1|aCryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the terminating ribosomeELECTRON MICROSCOPY2.32731
498CEU|1|aRetapamulin and Capreomycin bound to the 50S subunitELECTRON MICROSCOPY1.832729
508CGD|1|aClindamycin bound to the 50S subunitELECTRON MICROSCOPY1.982724
517PJS|1|AStructure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)ELECTRON MICROSCOPY2.352880
527BL4|1|Ain vitro reconstituted 50S-ObgE-GMPPNP-RsfS particleELECTRON MICROSCOPY2.42897
537QQ3|1|ICryo-EM structure of the E.coli 50S ribosomal subunit in complex with the antibiotic Myxovalargin A.ELECTRON MICROSCOPY2.12880
547ZP8|1|b70S E. coli ribosome with a stalled filamin domain 5 nascent chainELECTRON MICROSCOPY2.22901
557Z20|1|b70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chainELECTRON MICROSCOPY2.292901
568FTO|1|aE. coli 70S ribosome with an improved MS2 tag inserted in H98ELECTRON MICROSCOPY1.852743
577N1P|1|23Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformationELECTRON MICROSCOPY2.332882
588CGK|1|aLincomycin and Avilamycin bound to the 50S subunitELECTRON MICROSCOPY1.642678
598CAM|1|aEvernimicin bound to the 50S subunitELECTRON MICROSCOPY1.862669
606XZ7|1|AE. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).ELECTRON MICROSCOPY2.12876
614YBB|1|DAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.12883
628CGU|1|aGentamicin bound to the 30S bodyELECTRON MICROSCOPY1.8928
638CGJ|1|aStreptomycin bound to the 30S bodyELECTRON MICROSCOPY1.7928
648CEP|1|aRound2 30S head (no antibiotic)ELECTRON MICROSCOPY2.0428
658CGR|1|aApramycin bound to the 30S bodyELECTRON MICROSCOPY2.1227

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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