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Equivalence class NR_2.5_83717.64 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodÅDate
14YBB|1|DA (rep)Large subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.12015-03-18
24YBB|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.12015-03-18
36XZ7|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).Electron microscopy2.12020-07-22
46PJ6|1|ILarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541High resolution cryo-EM structure of E.coli 50SElectron microscopy2.22020-01-22
56PCR|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound 40oElectron microscopy2.52020-06-17
66PC6|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound 47Electron microscopy2.52020-06-17
76PC7|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound 46Electron microscopy2.52020-06-17

Release history

Release3.1363.1373.1383.139
Date2020-07-222020-07-292020-08-052020-08-12

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_2.5_83717.64NR_2.5_83717.633.136(6) 6PJ6|1|I, 6PCR|1|I, 6PC7|1|I, 6PC6|1|I, 4YBB|1|DA, 4YBB|1|CA(1) 6XZ7|1|A(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_2.5_83717.64NR_2.5_83717.653.140(7) 4YBB|1|CA, 4YBB|1|DA, 6PC6|1|I, 6PC7|1|I, 6PCR|1|I, 6PJ6|1|I, 6XZ7|1|A(0) (0)

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
16PC6|1|IE. coli 50S ribosome bound to compound 47ELECTRON MICROSCOPY2.52876
26PCR|1|IE. coli 50S ribosome bound to compound 40oELECTRON MICROSCOPY2.52876
36PC7|1|IE. coli 50S ribosome bound to compound 46ELECTRON MICROSCOPY2.52876
46PJ6|1|IHigh resolution cryo-EM structure of E.coli 50SELECTRON MICROSCOPY2.22874
54YBB|1|CAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.12876
64YBB|1|DAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.12883
76XZ7|1|AE. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).ELECTRON MICROSCOPY2.12876
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