Equivalence class NR_2.5_83717.75 Obsolete
| # | IFE | Compound(s) | RNA source organism | Title | Method | Resolution | Date |
|---|---|---|---|---|---|---|---|
| 1 | 4YBB|1|DA (rep) | 23S rRNA | Escherichia coli | High-resolution structure of the Escherichia coli ribosome | X-RAY DIFFRACTION | 2.1 | 2015-03-18 |
| 2 | 4YBB|1|CA | 23S rRNA | Escherichia coli | High-resolution structure of the Escherichia coli ribosome | X-RAY DIFFRACTION | 2.1 | 2015-03-18 |
| 3 | 7K00|1|a | 23S rRNA | Escherichia coli | Structure of the Bacterial Ribosome at 2 Angstrom Resolution | ELECTRON MICROSCOPY | 1.98 | 2020-09-23 |
| 4 | 6XZ7|1|A | 23S rRNA | Escherichia coli | E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet). | ELECTRON MICROSCOPY | 2.1 | 2020-07-22 |
| 5 | 6PJ6|1|I | 23S rRNA | Escherichia coli | High resolution cryo-EM structure of E.coli 50S | ELECTRON MICROSCOPY | 2.2 | 2020-01-22 |
| 6 | 7BL4|1|A | 23S ribosomal RNA | in vitro reconstituted 50S-ObgE-GMPPNP-RsfS particle | ELECTRON MICROSCOPY | 2.4 | 2021-05-12 | |
| 7 | 6PCR|1|I | 23S ribosomal RNA | Escherichia coli | E. coli 50S ribosome bound to compound 40o | ELECTRON MICROSCOPY | 2.5 | 2020-06-17 |
| 8 | 6PC6|1|I | 23S ribosomal RNA | Escherichia coli | E. coli 50S ribosome bound to compound 47 | ELECTRON MICROSCOPY | 2.5 | 2020-06-17 |
| 9 | 6PC7|1|I | 23S ribosomal RNA | Escherichia coli | E. coli 50S ribosome bound to compound 46 | ELECTRON MICROSCOPY | 2.5 | 2020-06-17 |
Release history
Parents
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 7BL4|1|A | in vitro reconstituted 50S-ObgE-GMPPNP-RsfS particle | ELECTRON MICROSCOPY | 2.4 | 2897 |
| 2 | 6PC6|1|I | E. coli 50S ribosome bound to compound 47 | ELECTRON MICROSCOPY | 2.5 | 2876 |
| 3 | 6PCR|1|I | E. coli 50S ribosome bound to compound 40o | ELECTRON MICROSCOPY | 2.5 | 2876 |
| 4 | 6PC7|1|I | E. coli 50S ribosome bound to compound 46 | ELECTRON MICROSCOPY | 2.5 | 2876 |
| 5 | 4YBB|1|CA | High-resolution structure of the Escherichia coli ribosome | X-RAY DIFFRACTION | 2.1 | 2876 |
| 6 | 6PJ6|1|I | High resolution cryo-EM structure of E.coli 50S | ELECTRON MICROSCOPY | 2.2 | 2874 |
| 7 | 7K00|1|a | Structure of the Bacterial Ribosome at 2 Angstrom Resolution | ELECTRON MICROSCOPY | 1.98 | 2729 |
| 8 | 6XZ7|1|A | E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet). | ELECTRON MICROSCOPY | 2.1 | 2876 |
| 9 | 4YBB|1|DA | High-resolution structure of the Escherichia coli ribosome | X-RAY DIFFRACTION | 2.1 | 2883 |