#IFECompound(s)RNA source organismTitleMethodResolutionDate
14YBB|1|DA (rep)23S rRNAEscherichia coliHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.12015-03-18
24YBB|1|CA23S rRNAEscherichia coliHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.12015-03-18
37K00|1|a23S rRNAEscherichia coliStructure of the Bacterial Ribosome at 2 Angstrom ResolutionELECTRON MICROSCOPY1.982020-09-23
46XZ7|1|A23S rRNAEscherichia coliE. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).ELECTRON MICROSCOPY2.12020-07-22
57LVK|1|I23S rRNAEscherichia coliCfr-modified 50S subunit from Escherichia coliELECTRON MICROSCOPY2.22021-12-15
66PJ6|1|I23S rRNAEscherichia coliHigh resolution cryo-EM structure of E.coli 50SELECTRON MICROSCOPY2.22020-01-22
77N1P|1|2323S rRNAEscherichia coli K-12Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformationELECTRON MICROSCOPY2.332021-07-14
87PJS|1|A23S ribosomal RNAEscherichia coliStructure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)ELECTRON MICROSCOPY2.352021-10-20
97S1H|1|I23S rRNAEscherichia coliWild-type Escherichia coli ribosome with antibiotic linezolidELECTRON MICROSCOPY2.352021-11-17
107S1K|1|I23S rRNAEscherichia coliCfr-modified Escherichia coli stalled ribosome with antibiotic radezolidELECTRON MICROSCOPY2.422022-01-19
117O1A|1|BARibosomal RNA 23SEscherichia coli K-12Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophanELECTRON MICROSCOPY2.42021-09-01
127S1G|1|I23S rRNAEscherichia coliwild-type Escherichia coli stalled ribosome with antibiotic linezolidELECTRON MICROSCOPY2.482021-11-17
137BL4|1|A23S ribosomal RNAEscherichia coli K-12in vitro reconstituted 50S-ObgE-GMPPNP-RsfS particleELECTRON MICROSCOPY2.42021-05-12
146PCR|1|I23S ribosomal RNAEscherichia coliE. coli 50S ribosome bound to compound 40oELECTRON MICROSCOPY2.52020-06-17
156PC6|1|I23S ribosomal RNAEscherichia coliE. coli 50S ribosome bound to compound 47ELECTRON MICROSCOPY2.52020-06-17
166PC7|1|I23S ribosomal RNAEscherichia coliE. coli 50S ribosome bound to compound 46ELECTRON MICROSCOPY2.52020-06-17

Release history

Release3.219
Date2022-02-23

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_2.5_83717.89NR_2.5_83717.883.219(16) 4YBB|1|CA, 7S1H|1|I, 7S1G|1|I, 7PJS|1|A, 7O1A|1|BA, 7N1P|1|23, 7LVK|1|I, 7K00|1|a, 7BL4|1|A, 6XZ7|1|A, 6PJ6|1|I, 6PCR|1|I, 6PC7|1|I, 6PC6|1|I, 4YBB|1|DA, 7S1K|1|I(0) (0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_2.5_83717.89NR_2.5_83717.903.220(16) 6XZ7|1|A, 7S1H|1|I, 6PJ6|1|I, 7S1G|1|I, 7PJS|1|A, 6PCR|1|I, 7O1A|1|BA, 6PC7|1|I, 7N1P|1|23, 6PC6|1|I, 7LVK|1|I, 4YBB|1|DA, 7K00|1|a, 4YBB|1|CA, 7BL4|1|A, 7S1K|1|I(0) (2) 7S1I|1|I, 7S1J|1|I

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
14YBB|1|CAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.12876
27LVK|1|ICfr-modified 50S subunit from Escherichia coliELECTRON MICROSCOPY2.22876
36PJ6|1|IHigh resolution cryo-EM structure of E.coli 50SELECTRON MICROSCOPY2.22874
46PC7|1|IE. coli 50S ribosome bound to compound 46ELECTRON MICROSCOPY2.52876
56PCR|1|IE. coli 50S ribosome bound to compound 40oELECTRON MICROSCOPY2.52876
66PC6|1|IE. coli 50S ribosome bound to compound 47ELECTRON MICROSCOPY2.52876
77BL4|1|Ain vitro reconstituted 50S-ObgE-GMPPNP-RsfS particleELECTRON MICROSCOPY2.42897
87O1A|1|BACryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophanELECTRON MICROSCOPY2.42874
97PJS|1|AStructure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)ELECTRON MICROSCOPY2.352880
107S1K|1|ICfr-modified Escherichia coli stalled ribosome with antibiotic radezolidELECTRON MICROSCOPY2.422875
117S1H|1|IWild-type Escherichia coli ribosome with antibiotic linezolidELECTRON MICROSCOPY2.352876
127S1G|1|Iwild-type Escherichia coli stalled ribosome with antibiotic linezolidELECTRON MICROSCOPY2.482874
137N1P|1|23Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformationELECTRON MICROSCOPY2.332882
147K00|1|aStructure of the Bacterial Ribosome at 2 Angstrom ResolutionELECTRON MICROSCOPY1.982729
156XZ7|1|AE. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).ELECTRON MICROSCOPY2.12876
164YBB|1|DAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.12883