Equivalence class NR_2.5_92081.4 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4UN5|1|A (rep) | SGRNA | synthetic construct | Crystal structure of Cas9 bound to PAM-containing DNA target containing mismatches at positions 1-3 | X-ray diffraction | 2.4 | 2014-07-23 | |||
| 2 | 5FQ5|1|A | SGRNA | synthetic construct | Crystal structure of Cas9-sgRNA-DNA complex solved by native SAD phasing | X-ray diffraction | 2.14 | 2016-03-23 | |||
| 3 | 5FW1|1|A | SGRNA | synthetic construct | Crystal structure of SpyCas9 variant VQR bound to sgRNA and TGAG PAM target DNA | X-ray diffraction | 2.5 | 2016-04-20 | |||
| 4 | 4UN4|1|A | SGRNA | synthetic construct | Crystal structure of Cas9 bound to PAM-containing DNA target with mismatches at positions 1-2 | X-ray diffraction | 2.37 | 2014-07-23 |
Release history
| Release | 2.80 | 2.81 | 2.82 | 2.83 | 2.84 | 2.85 | 2.86 | 2.87 | 2.88 | 2.89 | 2.90 | 2.91 | 2.92 | 2.93 | 2.94 | 2.95 | 2.96 | 2.97 | 2.98 | 2.99 | 2.100 | 2.101 | 2.102 | 2.103 | 2.104 | 2.105 | 2.106 | 2.107 | 2.108 | 2.109 | 2.110 | 2.111 | 2.112 | 2.113 | 2.114 | 2.115 | 2.116 | 2.117 | 2.118 | 2.119 | 2.120 | 2.121 | 2.122 | 2.123 | 2.124 | 2.125 | 2.126 | 2.127 | 2.128 | 2.129 | 2.130 | 2.131 | 2.132 | 2.133 | 2.134 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2016-06-17 | 2016-06-24 | 2016-07-01 | 2016-07-08 | 2016-07-15 | 2016-07-22 | 2016-07-29 | 2016-08-05 | 2016-08-12 | 2016-08-19 | 2016-08-26 | 2016-09-02 | 2016-09-09 | 2016-09-16 | 2016-09-23 | 2016-09-30 | 2016-10-07 | 2016-10-14 | 2016-10-21 | 2016-10-28 | 2016-11-04 | 2016-11-11 | 2016-11-18 | 2016-11-25 | 2016-12-02 | 2016-12-09 | 2016-12-16 | 2016-12-23 | 2016-12-30 | 2017-01-06 | 2017-01-13 | 2017-01-20 | 2017-01-27 | 2017-02-03 | 2017-02-10 | 2017-02-17 | 2017-02-24 | 2017-03-03 | 2017-03-10 | 2017-03-17 | 2017-03-24 | 2017-03-31 | 2017-04-11 | 2017-04-15 | 2017-04-26 | 2017-04-29 | 2017-05-09 | 2017-05-15 | 2017-05-20 | 2017-05-27 | 2017-06-07 | 2017-06-11 | 2017-06-21 | 2017-06-24 | 2017-06-28 |
Parents
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 4UN5|1|A | Crystal structure of Cas9 bound to PAM-containing DNA target containing mismatches at positions 1-3 | X-RAY DIFFRACTION | 2.4 | 82 |
| 2 | 5FQ5|1|A | Crystal structure of Cas9-sgRNA-DNA complex solved by native SAD phasing | X-RAY DIFFRACTION | 2.14 | 83 |
| 3 | 4UN4|1|A | Crystal structure of Cas9 bound to PAM-containing DNA target with mismatches at positions 1-2 | X-RAY DIFFRACTION | 2.37 | 82 |
| 4 | 5FW1|1|A | Crystal structure of SpyCas9 variant VQR bound to sgRNA and TGAG PAM target DNA | X-RAY DIFFRACTION | 2.5 | 81 |