#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
11A34|B (rep)SATELLITE TOBACCO MOSAIC VIRUS/RNA COMPLEXX-ray diffraction1.811998-04-29
21EFO|BCRYSTAL STRUCTURE OF AN ADENINE BULGE IN THE RNA CHAIN OF A DNA/RNA HYBRID, D(CTCCTCTTC)/R(GAAGAGAGAG)X-ray diffraction2.32000-05-29
31G4Q|ARNA/DNA HYBRID DECAMER OF CAAAGAAAAG/CTTTTCTTTGX-ray diffraction1.152003-07-08
41JB8|AThe Crystal Structure of an RNA/DNA Hybrid Reveals Novel Intermolecular IntercalationX-ray diffraction2.382003-07-01
51OO7|ADNA.RNA HYBRID DUPLEX CONTAINING A 5-PROPYNE DNA STRAND AND PURINE-RICH RNA STRAND, NMR, 4 STRUCTURESSolution NMR2003-11-11
61PJG|ARNA/DNA Hybrid Decamer of CAAAGAAAAG/CTTTTCTTTGX-ray diffraction1.152003-12-09
71PJO|ACrystal Structure of an RNA/DNA hybrid of HIV-1 PPTX-ray diffraction1.12003-12-09
81R9S|RRNA POLYMERASE II STRAND SEPARATED ELONGATION COMPLEX, MATCHED NUCLEOTIDEX-ray diffraction4.252004-11-16
91R9T|RRNA POLYMERASE II STRAND SEPARATED ELONGATION COMPLEX, MISMATCHED NUCLEOTIDEX-ray diffraction3.52004-11-16
101RRD|ADNA/RNA HYBRID DUPLEX CONTAINING A PURINE-RICH RNA STRAND, NMR, 10 STRUCTURESSolution NMR1998-04-22
111RRR|ARNA DUPLEX CONTAINING A PURINE-RICH STRAND, NMR, 10 STRUCTURESSolution NMR1998-04-22
121SFO|RRNA POLYMERASE II STRAND SEPARATED ELONGATION COMPLEXX-ray diffraction3.612004-03-02
131Y1W|PComplete RNA Polymerase II elongation complexX-ray diffraction42005-01-04
141Y77|PComplete RNA Polymerase II elongation complex with substrate analogue GMPCPPX-ray diffraction4.52005-01-04
152E2H|RRNA polymerase II elongation complex at 5 mM Mg2+ with GTPX-ray diffraction3.952006-12-12
162E2I|RRNA polymerase II elongation complex in 5 mM Mg+2 with 2'-dGTPX-ray diffraction3.412006-12-19
172JA5|Psynthetic constructCPD lesion containing RNA Polymerase II elongation complex AX-ray diffraction3.82007-02-20
182JA6|Psynthetic constructCPD lesion containing RNA Polymerase II elongation complex BX-ray diffraction42007-02-20
192JA7|3synthetic constructCPD lesion containing RNA Polymerase II elongation complex CX-ray diffraction3.82007-02-20
202JA8|Psynthetic constructCPD lesion containing RNA Polymerase II elongation complex DX-ray diffraction3.82007-02-20
212NVQ|Rsynthetic constructRNA Polymerase II Elongation Complex in 150 mM Mg+2 with 2'dUTPX-ray diffraction2.92006-12-12
222NVT|RRNA Polymerase II Elongation Complex in 150 mM Mg+2 with GMPCPPX-ray diffraction3.362006-12-12
232NVX|RRNA polymerase II elongation complex in 5 mM Mg+2 with 2'-dUTPX-ray diffraction3.62006-12-19
242NVZ|Rsynthetic constructRNA Polymerase II elongation complex with UTP, updated 11/2006X-ray diffraction4.32006-12-19
252R7Z|PCisplatin lesion containing RNA polymerase II elongation complexX-ray diffraction3.82007-11-20
262VUM|Psynthetic constructAlpha-amanitin inhibited complete RNA polymerase II elongation complexX-ray diffraction3.42008-06-17
272YU9|Rsynthetic constructRNA polymerase II elongation complex in 150 mm MG+2 with UTPX-ray diffraction3.42007-04-24
283HOV|PComplete RNA polymerase II elongation complex IIX-ray diffraction3.52009-07-28
293HOX|PComplete RNA polymerase II elongation complex VX-ray diffraction3.652009-07-28
303HOY|PComplete RNA polymerase II elongation complex VIX-ray diffraction3.42009-07-28
313I4M|P8-oxoguanine containing RNA polymerase II elongation complex DX-ray diffraction3.72009-09-08
323I4N|P8-oxoguanine containing RNA polymerase II elongation complex EX-ray diffraction3.92009-09-08
333M4O|RRNA polymerase II elongation complex BX-ray diffraction3.572010-05-12
34404D|ACRYSTAL STRUCTURE OF THE RNA/DNA HYBRID R(GAAGAGAAGC). D(GCTTCTCTTC)X-ray diffraction2.51998-12-14
354BY1|Psynthetic constructelongating RNA Polymerase II-Bye1 TLD complex soaked with AMPCPPX-ray diffraction3.62013-09-11
364BY7|Psynthetic constructelongating RNA Polymerase II-Bye1 TLD complexX-ray diffraction3.152013-09-11
374NIA|PTobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
384OQ8|BTobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using icosahedral constraintsX-ray diffraction1.452014-09-10
394OQ9|PTobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
404Q5V|BCrystal structure of the catalytic core of human DNA polymerase alpha in ternary complex with an RNA-primed DNA template and aphidicolinX-ray diffraction2.522014-11-26

Release history

Release1.881.89
Date2014-11-282014-12-05

Parents

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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
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