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Equivalence class NR_2.5_97519.19 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
14Y4O|1|1A (rep)Large subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolutionX-ray diffraction2.32015-03-18
24Y4P|1|1ALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-ray diffraction2.52015-03-18
34W2F|1|BALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.42014-10-15
44Y4O|1|2ALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolutionX-ray diffraction2.32015-03-18
54W2F|1|DALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.42014-10-15
64Y4P|1|2ALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-ray diffraction2.52015-03-18

Release history

Release2.922.932.942.952.96
Date2016-09-092016-09-162016-09-232016-09-302016-10-07

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_2.5_97519.19NR_all_97519.182.92(6) 4W2F|1|BA, 4Y4P|1|2A, 4W2F|1|DA, 4Y4O|1|1A, 4Y4O|1|2A, 4Y4P|1|1A(0) (274) 4WT1|1|1H, 4V84|1|BA, 5D8B|1|ZC, 4L71|1|RA, 4V8J|1|BA, 4V9K|1|BA, 4YPB|1|YA, 4V5F|1|BA, 4V6A|1|BA, 5IB7|1|1H, 4L47|1|RA, 4V8I|1|BA, 4WQU|1|CA, 4TUC|1|RA, 4XEJ|1|B23S, 4V5E|1|BA, 4V8C|1|AA, 5E81|1|1H, 4V90|1|BA, 5HD1|1|2A, 4V4T|1|BA, 4V9Q|1|AA, 4WQR|1|1H, 5FDU|1|2A, 4V7K|1|AA, 4V8B|1|BA, 4LNT|1|RA, 4V4R|1|BA, 4V9N|1|BA, 4Z8C|1|2A, 4V5K|1|BA, 5F8K|1|2A, 4V7J|1|AA, 4V9B|1|DA, 5IMR|1|D, 4LFZ|1|RA, 4V5S|1|DA, 4WRA|1|1H, 5HCQ|1|2A, 4Z3S|1|2A, 4V8F|1|AA, 4WQ1|1|1H, 4V5A|1|BA, 5DOX|1|2A, 5HCP|1|2A, 4V7P|1|BA, 4V9L|1|BA, 1VVJ|1|RA, 4WPO|1|CA, 4P6F|1|RA, 4V6F|1|AA, 1VY6|1|DA, 4V8G|1|DA, 4V9H|1|BA, 4WZO|1|14, 4V5C|1|DA, 4V63|1|BA, 5HCR|1|1A, 1VY5|1|DA, 4V8F|1|DA, 4WQF|1|AA, 4P70|1|YA, 4WZD|1|14, 4V5A|1|DA, 4V87|1|DA, 5DOY|1|1A, 4V8Q|1|AA, 5HCQ|1|1A, 4V4I|1|w, 4V9L|1|DA, 4WQ1|1|14, 5EL7|1|14, 4V6F|1|DA, 4V84|1|DA, 4L71|1|YA, 4TUE|1|YA, 4V9K|1|DA, 4YZV|1|RA, 4V5F|1|DA, 5EL6|1|14, 4V6A|1|DA, 4V97|1|BA, 5IB8|1|14, 4L47|1|YA, 4V5Q|1|BA, 4WQY|1|AA, 5HAU|1|1A, 4YPB|1|RA, 5J8B|1|A, 4V8C|1|BA, 4W4G|1|RA, 4V4X|1|BA, 5A9Z|1|AA, 4W

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_2.5_97519.19NR_2.5_97519.202.97(6) 4W2F|1|BA, 4W2F|1|DA, 4Y4O|1|1A, 4Y4O|1|2A, 4Y4P|1|1A, 4Y4P|1|2A(0) (0)

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
14Y4P|1|1ACrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.52860
24W2F|1|BACrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.42871
34W2F|1|DACrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.42800
44Y4P|1|2ACrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.52789
54Y4O|1|2ACrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolutionX-RAY DIFFRACTION2.32856
64Y4O|1|1ACrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolutionX-RAY DIFFRACTION2.32861
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