#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
16N6E|1|D (rep)RNA (5'-R(P*GP*A)-3')synthetic constructVibrio cholerae Oligoribonuclease bound to pGAX-ray diffraction1.582019-06-12
24G7O|1|I5'-R(*GP*A)-3'Crystal structure of Thermus thermophilus transcription initiation complex containing 2 nt of RNAX-ray diffraction2.992012-10-31
34G7O|1|S5'-R(*GP*A)-3'Crystal structure of Thermus thermophilus transcription initiation complex containing 2 nt of RNAX-ray diffraction2.992012-10-31
45X22|1|SRNA (5'-R(*GP*A)-3')Thermus thermophilusCrystal structure of Thermus thermophilus transcription initiation complex with GpA and CMPcPPX-ray diffraction3.352017-07-05
55X22|1|IRNA (5'-R(*GP*A)-3')Thermus thermophilusCrystal structure of Thermus thermophilus transcription initiation complex with GpA and CMPcPPX-ray diffraction3.352017-07-05
65X21|1|IRNA (5'-R(*GP*A)-3')Thermus thermophilusCrystal structure of Thermus thermophilus transcription initiation complex with GpA and pseudouridimycin (PUM)X-ray diffraction3.322017-07-05
75UH6|1|IRNA (5'-R(*GP*A)-3')Mycobacterium tuberculosisCrystal structure of Mycobacterium tuberculosis transcription initiation complex containing 2ntRNA in complex with RifampinX-ray diffraction3.842017-04-12
86L74|1|IRNA (5'-D(*(GTP))-R(P*A)-3')synthetic constructThermus thermophilus initial transcription complex comprising sigma A and 5'-triphosphate RNA of 2 ntX-ray diffraction3.122020-03-11
95UH9|1|IRNA (5'-R(*GP*A)-3')Mycobacterium tuberculosisCrystal structure of Mycobacterium tuberculosis transcription initiation complex containing 2nt RNAX-ray diffraction4.42017-04-12

Release history

Release3.1173.1183.1193.1203.1213.1223.1233.1243.1253.1263.1273.1283.1293.1303.1313.1323.1333.1343.1353.1363.1373.1383.1393.1403.1413.1423.1433.1443.1453.1463.1473.1483.1493.1503.1513.1523.1533.1543.1553.1563.1573.1583.1593.1603.1613.1623.1633.1643.1653.1663.1673.1683.1693.1703.1713.1723.1733.1743.1753.1763.1773.1783.1793.1803.1813.1823.1833.1843.1853.1863.1873.1883.1893.1903.1913.1923.1933.1943.1953.1963.1973.1983.1993.2003.2013.2023.2033.2043.2053.2063.2073.2083.2093.2103.2113.2123.2133.2143.2153.2163.2173.2183.2193.2203.2213.2223.2233.2243.2253.2263.2273.2283.2293.2303.2313.2323.2333.2343.2353.2363.2373.2383.2393.2403.2413.2423.2433.2443.2453.2463.2473.2483.2493.2503.2513.2523.2533.2543.2553.2563.2573.2583.2593.2603.2613.2623.2633.2643.2653.2663.2673.2683.2693.2703.2713.2723.2733.2743.2753.2763.2773.2783.2793.2803.2813.2823.2833.2843.2853.2863.2873.2883.289
Date2020-03-112020-03-182020-03-252020-04-012020-04-082020-04-152020-04-222020-04-292020-05-062020-05-132020-05-202020-05-272020-06-032020-06-102020-06-172020-06-242020-07-012020-07-082020-07-152020-07-222020-07-292020-08-052020-08-122020-08-192020-08-262020-09-022020-09-092020-09-162020-09-232020-09-302020-10-072020-10-142020-10-212020-10-282020-11-042020-11-112020-11-182020-11-252020-12-022020-12-092020-12-162020-12-232020-12-302021-01-062021-01-132021-01-202021-01-272021-02-032021-02-102021-02-172021-02-242021-03-032021-03-102021-03-172021-03-242021-03-312021-04-072021-04-142021-04-212021-04-282021-05-052021-05-122021-05-192021-05-262021-06-022021-06-092021-06-162021-06-232021-06-302021-07-072021-07-142021-07-212021-07-282021-08-042021-08-112021-08-182021-08-252021-09-012021-09-082021-09-152021-09-222021-09-292021-10-062021-10-132021-10-202021-10-272021-11-032021-11-102021-11-172021-11-242021-12-012021-12-082021-12-152021-12-222021-12-292022-01-052022-01-122022-01-192022-01-262022-02-022022-02-092022-02-162022-02-232022-03-022022-03-092022-03-162022-03-232022-03-302022-04-062022-04-132022-04-202022-04-272022-05-042022-05-112022-05-182022-05-252022-06-012022-06-082022-06-152022-06-222022-06-292022-07-062022-07-132022-07-202022-07-272022-08-032022-08-102022-08-172022-08-242022-08-312022-09-072022-09-142022-09-212022-09-282022-10-052022-10-122022-10-192022-10-262022-11-022022-11-092022-11-162022-11-232022-11-302022-12-072022-12-142022-12-212022-12-282023-01-042023-01-112023-01-182023-01-252023-02-012023-02-082023-02-152023-02-222023-03-012023-03-082023-03-152023-03-222023-03-292023-04-052023-04-122023-04-192023-04-262023-05-032023-05-102023-05-172023-05-242023-05-312023-06-072023-06-142023-06-212023-06-28

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_20.0_04288.3NR_20.0_04288.23.117(8) 6N6E|1|D, 5X22|1|S, 5X22|1|I, 5X21|1|I, 5UH9|1|I, 5UH6|1|I, 4G7O|1|S, 4G7O|1|I(1) 6L74|1|I(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_20.0_04288.3NR_20.0_04288.43.290(9) 4G7O|1|S, 4G7O|1|I, 6N6E|1|D, 6L74|1|I, 5X22|1|S, 5X22|1|I, 5X21|1|I, 5UH9|1|I, 5UH6|1|I(0) (1) 8I88|1|L

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
15X22|1|ICrystal structure of Thermus thermophilus transcription initiation complex with GpA and CMPcPPX-RAY DIFFRACTION3.352
26N6E|1|DVibrio cholerae Oligoribonuclease bound to pGAX-RAY DIFFRACTION1.582
35UH6|1|ICrystal structure of Mycobacterium tuberculosis transcription initiation complex containing 2ntRNA in complex with RifampinX-RAY DIFFRACTION3.842
45X22|1|SCrystal structure of Thermus thermophilus transcription initiation complex with GpA and CMPcPPX-RAY DIFFRACTION3.352
55UH9|1|ICrystal structure of Mycobacterium tuberculosis transcription initiation complex containing 2nt RNAX-RAY DIFFRACTION4.42
64G7O|1|SCrystal structure of Thermus thermophilus transcription initiation complex containing 2 nt of RNAX-RAY DIFFRACTION2.992
76L74|1|IThermus thermophilus initial transcription complex comprising sigma A and 5'-triphosphate RNA of 2 ntX-RAY DIFFRACTION3.121
85X21|1|ICrystal structure of Thermus thermophilus transcription initiation complex with GpA and pseudouridimycin (PUM)X-RAY DIFFRACTION3.322
94G7O|1|ICrystal structure of Thermus thermophilus transcription initiation complex containing 2 nt of RNAX-RAY DIFFRACTION2.992
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