RNA 3D Hub //

Equivalence class NR_20.0_06185.1 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
12WJ8|1|d (rep)RNA (5'-R(*CP*CP*CP*CP*CP*C)-3')Escherichia coliRespiratory Syncitial Virus RiboNucleoProteinX-ray diffraction3.292009-12-08
22WJ8|1|iRNA (5'-R(*CP*CP*CP*CP*CP*C)-3')Escherichia coliRespiratory Syncitial Virus RiboNucleoProteinX-ray diffraction3.292009-12-08
32WJ8|1|lRNA (5'-R(*CP*CP*CP*CP*CP*C)-3')Escherichia coliRespiratory Syncitial Virus RiboNucleoProteinX-ray diffraction3.292009-12-08
42WJ8|1|fRNA (5'-R(*CP*CP*CP*CP*CP*C)-3')Escherichia coliRespiratory Syncitial Virus RiboNucleoProteinX-ray diffraction3.292009-12-08
52WJ8|1|cRNA (5'-R(*CP*CP*CP*CP*CP*C)-3')Escherichia coliRespiratory Syncitial Virus RiboNucleoProteinX-ray diffraction3.292009-12-08
62WJ8|1|qRNA (5'-R(*CP*CP*CP*CP*CP*C)-3')Escherichia coliRespiratory Syncitial Virus RiboNucleoProteinX-ray diffraction3.292009-12-08
72WJ8|1|jRNA (5'-R(*CP*CP*CP*CP*CP*C)-3')Escherichia coliRespiratory Syncitial Virus RiboNucleoProteinX-ray diffraction3.292009-12-08
82WJ8|1|pRNA (5'-R(*CP*CP*CP*CP*CP*C)-3')Escherichia coliRespiratory Syncitial Virus RiboNucleoProteinX-ray diffraction3.292009-12-08
92WJ8|1|kRNA (5'-R(*CP*CP*CP*CP*CP*C)-3')Escherichia coliRespiratory Syncitial Virus RiboNucleoProteinX-ray diffraction3.292009-12-08
102WJ8|1|eRNA (5'-R(*CP*CP*CP*CP*CP*C)-3')Escherichia coliRespiratory Syncitial Virus RiboNucleoProteinX-ray diffraction3.292009-12-08
112WJ8|1|tRNA (5'-R(*CP*CP*CP*CP*CP*C)-3')Escherichia coliRespiratory Syncitial Virus RiboNucleoProteinX-ray diffraction3.292009-12-08
122WJ8|1|bRNA (5'-R(*CP*CP*CP*CP*CP*C)-3')Escherichia coliRespiratory Syncitial Virus RiboNucleoProteinX-ray diffraction3.292009-12-08
132WJ8|1|oRNA (5'-R(*CP*CP*CP*CP*CP*C)-3')Escherichia coliRespiratory Syncitial Virus RiboNucleoProteinX-ray diffraction3.292009-12-08
142WJ8|1|nRNA (5'-R(*CP*CP*CP*CP*CP*C)-3')Escherichia coliRespiratory Syncitial Virus RiboNucleoProteinX-ray diffraction3.292009-12-08
152WJ8|1|aRNA (5'-R(*CP*CP*CP*CP*CP*C)-3')Escherichia coliRespiratory Syncitial Virus RiboNucleoProteinX-ray diffraction3.292009-12-08
162WJ8|1|hRNA (5'-R(*CP*CP*CP*CP*CP*C)-3')Escherichia coliRespiratory Syncitial Virus RiboNucleoProteinX-ray diffraction3.292009-12-08
172WJ8|1|rRNA (5'-R(*CP*CP*CP*CP*CP*C)-3')Escherichia coliRespiratory Syncitial Virus RiboNucleoProteinX-ray diffraction3.292009-12-08
182WJ8|1|mRNA (5'-R(*CP*CP*CP*CP*CP*C)-3')Escherichia coliRespiratory Syncitial Virus RiboNucleoProteinX-ray diffraction3.292009-12-08
192WJ8|1|sRNA (5'-R(*CP*CP*CP*CP*CP*C)-3')Escherichia coliRespiratory Syncitial Virus RiboNucleoProteinX-ray diffraction3.292009-12-08
202WJ8|1|gRNA (5'-R(*CP*CP*CP*CP*CP*C)-3')Escherichia coliRespiratory Syncitial Virus RiboNucleoProteinX-ray diffraction3.292009-12-08
218PDL|1|BRNAEscherichia coli10-mer ring of human metapneumovirus (HMPV) N-RNAElectron microscopy3.12023-12-06
228OP1|1|GRNA (5'-R(P*CP*CP*CP*CP*CP*CP*C)-3')Respiratory syncytial virusSubsection of a helical nucleocapsid of the Respiratory Syncytial VirusElectron microscopy3.52023-09-27
238OP1|1|HRNA (5'-R(P*CP*CP*CP*CP*CP*CP*C)-3')Respiratory syncytial virusSubsection of a helical nucleocapsid of the Respiratory Syncytial VirusElectron microscopy3.52023-09-27
248OP1|1|IRNA (5'-R(P*CP*CP*CP*CP*CP*CP*C)-3')Respiratory syncytial virusSubsection of a helical nucleocapsid of the Respiratory Syncytial VirusElectron microscopy3.52023-09-27
258OP1|1|JRNA (5'-R(P*CP*CP*CP*CP*CP*CP*C)-3')Respiratory syncytial virusSubsection of a helical nucleocapsid of the Respiratory Syncytial VirusElectron microscopy3.52023-09-27
268OP1|1|FRNA (5'-R(P*CP*CP*CP*CP*CP*CP*C)-3')Respiratory syncytial virusSubsection of a helical nucleocapsid of the Respiratory Syncytial VirusElectron microscopy3.52023-09-27
278PDR|1|aRNAEscherichia coliRigid body fit of assembled HMPV N-RNA spiral bound to the C-terminal region of PElectron microscopy42023-12-06
288PDR|1|bRNAEscherichia coliRigid body fit of assembled HMPV N-RNA spiral bound to the C-terminal region of PElectron microscopy42023-12-06
298PDR|1|cRNAEscherichia coliRigid body fit of assembled HMPV N-RNA spiral bound to the C-terminal region of PElectron microscopy42023-12-06
308PDR|1|dRNAEscherichia coliRigid body fit of assembled HMPV N-RNA spiral bound to the C-terminal region of PElectron microscopy42023-12-06
318PDR|1|eRNAEscherichia coliRigid body fit of assembled HMPV N-RNA spiral bound to the C-terminal region of PElectron microscopy42023-12-06
328PDR|1|fRNAEscherichia coliRigid body fit of assembled HMPV N-RNA spiral bound to the C-terminal region of PElectron microscopy42023-12-06
338PDR|1|gRNAEscherichia coliRigid body fit of assembled HMPV N-RNA spiral bound to the C-terminal region of PElectron microscopy42023-12-06
348PDR|1|hRNAEscherichia coliRigid body fit of assembled HMPV N-RNA spiral bound to the C-terminal region of PElectron microscopy42023-12-06
358PDR|1|iRNAEscherichia coliRigid body fit of assembled HMPV N-RNA spiral bound to the C-terminal region of PElectron microscopy42023-12-06
368PDR|1|jRNAEscherichia coliRigid body fit of assembled HMPV N-RNA spiral bound to the C-terminal region of PElectron microscopy42023-12-06
378PDR|1|kRNAEscherichia coliRigid body fit of assembled HMPV N-RNA spiral bound to the C-terminal region of PElectron microscopy42023-12-06
388PDN|1|aRNAEscherichia coliSpiral of assembled human metapneumovirus (HMPV) N-RNAElectron microscopy4.72023-12-06
398PDN|1|bRNAEscherichia coliSpiral of assembled human metapneumovirus (HMPV) N-RNAElectron microscopy4.72023-12-06
408PDN|1|cRNAEscherichia coliSpiral of assembled human metapneumovirus (HMPV) N-RNAElectron microscopy4.72023-12-06
418PDN|1|dRNAEscherichia coliSpiral of assembled human metapneumovirus (HMPV) N-RNAElectron microscopy4.72023-12-06
428PDN|1|eRNAEscherichia coliSpiral of assembled human metapneumovirus (HMPV) N-RNAElectron microscopy4.72023-12-06
438PDN|1|fRNAEscherichia coliSpiral of assembled human metapneumovirus (HMPV) N-RNAElectron microscopy4.72023-12-06
448PDN|1|gRNAEscherichia coliSpiral of assembled human metapneumovirus (HMPV) N-RNAElectron microscopy4.72023-12-06
458PDN|1|hRNAEscherichia coliSpiral of assembled human metapneumovirus (HMPV) N-RNAElectron microscopy4.72023-12-06
468PDN|1|iRNAEscherichia coliSpiral of assembled human metapneumovirus (HMPV) N-RNAElectron microscopy4.72023-12-06
478PDN|1|jRNAEscherichia coliSpiral of assembled human metapneumovirus (HMPV) N-RNAElectron microscopy4.72023-12-06
488PDN|1|kRNAEscherichia coliSpiral of assembled human metapneumovirus (HMPV) N-RNAElectron microscopy4.72023-12-06
498PDN|1|lRNAEscherichia coliSpiral of assembled human metapneumovirus (HMPV) N-RNAElectron microscopy4.72023-12-06

Release history

Release3.3123.3133.3143.3153.3163.3173.3183.3193.3203.3213.3223.3233.3243.3253.3263.3273.3283.3293.3303.3313.332
Date2023-12-062023-12-132023-12-202023-12-272024-01-032024-01-102024-01-172024-01-242024-01-312024-02-072024-02-142024-02-212024-02-282024-03-062024-03-132024-03-202024-03-272024-04-032024-04-102024-04-172024-04-24

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
18OP1|1|GSubsection of a helical nucleocapsid of the Respiratory Syncytial VirusELECTRON MICROSCOPY3.57
28OP1|1|FSubsection of a helical nucleocapsid of the Respiratory Syncytial VirusELECTRON MICROSCOPY3.57
38OP1|1|HSubsection of a helical nucleocapsid of the Respiratory Syncytial VirusELECTRON MICROSCOPY3.57
42WJ8|1|dRespiratory Syncitial Virus RiboNucleoProteinX-RAY DIFFRACTION3.297
52WJ8|1|sRespiratory Syncitial Virus RiboNucleoProteinX-RAY DIFFRACTION3.297
62WJ8|1|lRespiratory Syncitial Virus RiboNucleoProteinX-RAY DIFFRACTION3.297
72WJ8|1|rRespiratory Syncitial Virus RiboNucleoProteinX-RAY DIFFRACTION3.297
82WJ8|1|jRespiratory Syncitial Virus RiboNucleoProteinX-RAY DIFFRACTION3.297
92WJ8|1|cRespiratory Syncitial Virus RiboNucleoProteinX-RAY DIFFRACTION3.297
102WJ8|1|oRespiratory Syncitial Virus RiboNucleoProteinX-RAY DIFFRACTION3.297
112WJ8|1|bRespiratory Syncitial Virus RiboNucleoProteinX-RAY DIFFRACTION3.297
122WJ8|1|mRespiratory Syncitial Virus RiboNucleoProteinX-RAY DIFFRACTION3.297
132WJ8|1|gRespiratory Syncitial Virus RiboNucleoProteinX-RAY DIFFRACTION3.297
142WJ8|1|tRespiratory Syncitial Virus RiboNucleoProteinX-RAY DIFFRACTION3.297
152WJ8|1|pRespiratory Syncitial Virus RiboNucleoProteinX-RAY DIFFRACTION3.297
162WJ8|1|qRespiratory Syncitial Virus RiboNucleoProteinX-RAY DIFFRACTION3.297
172WJ8|1|nRespiratory Syncitial Virus RiboNucleoProteinX-RAY DIFFRACTION3.297
182WJ8|1|kRespiratory Syncitial Virus RiboNucleoProteinX-RAY DIFFRACTION3.297
192WJ8|1|eRespiratory Syncitial Virus RiboNucleoProteinX-RAY DIFFRACTION3.297
202WJ8|1|iRespiratory Syncitial Virus RiboNucleoProteinX-RAY DIFFRACTION3.297
212WJ8|1|aRespiratory Syncitial Virus RiboNucleoProteinX-RAY DIFFRACTION3.297
222WJ8|1|hRespiratory Syncitial Virus RiboNucleoProteinX-RAY DIFFRACTION3.297
232WJ8|1|fRespiratory Syncitial Virus RiboNucleoProteinX-RAY DIFFRACTION3.297
248PDR|1|hRigid body fit of assembled HMPV N-RNA spiral bound to the C-terminal region of PELECTRON MICROSCOPY47
258PDR|1|kRigid body fit of assembled HMPV N-RNA spiral bound to the C-terminal region of PELECTRON MICROSCOPY47
268PDR|1|cRigid body fit of assembled HMPV N-RNA spiral bound to the C-terminal region of PELECTRON MICROSCOPY47
278PDR|1|jRigid body fit of assembled HMPV N-RNA spiral bound to the C-terminal region of PELECTRON MICROSCOPY47
288PDR|1|iRigid body fit of assembled HMPV N-RNA spiral bound to the C-terminal region of PELECTRON MICROSCOPY47
298PDR|1|aRigid body fit of assembled HMPV N-RNA spiral bound to the C-terminal region of PELECTRON MICROSCOPY47
308PDR|1|bRigid body fit of assembled HMPV N-RNA spiral bound to the C-terminal region of PELECTRON MICROSCOPY47
318PDR|1|dRigid body fit of assembled HMPV N-RNA spiral bound to the C-terminal region of PELECTRON MICROSCOPY47
328PDR|1|gRigid body fit of assembled HMPV N-RNA spiral bound to the C-terminal region of PELECTRON MICROSCOPY47
338PDR|1|eRigid body fit of assembled HMPV N-RNA spiral bound to the C-terminal region of PELECTRON MICROSCOPY47
348PDR|1|fRigid body fit of assembled HMPV N-RNA spiral bound to the C-terminal region of PELECTRON MICROSCOPY47
358PDL|1|B10-mer ring of human metapneumovirus (HMPV) N-RNAELECTRON MICROSCOPY3.17
368PDN|1|eSpiral of assembled human metapneumovirus (HMPV) N-RNAELECTRON MICROSCOPY4.77
378PDN|1|bSpiral of assembled human metapneumovirus (HMPV) N-RNAELECTRON MICROSCOPY4.77
388PDN|1|kSpiral of assembled human metapneumovirus (HMPV) N-RNAELECTRON MICROSCOPY4.77
398PDN|1|hSpiral of assembled human metapneumovirus (HMPV) N-RNAELECTRON MICROSCOPY4.77
408PDN|1|cSpiral of assembled human metapneumovirus (HMPV) N-RNAELECTRON MICROSCOPY4.77
418PDN|1|iSpiral of assembled human metapneumovirus (HMPV) N-RNAELECTRON MICROSCOPY4.77
428PDN|1|fSpiral of assembled human metapneumovirus (HMPV) N-RNAELECTRON MICROSCOPY4.77
438PDN|1|jSpiral of assembled human metapneumovirus (HMPV) N-RNAELECTRON MICROSCOPY4.77
448PDN|1|gSpiral of assembled human metapneumovirus (HMPV) N-RNAELECTRON MICROSCOPY4.77
458PDN|1|dSpiral of assembled human metapneumovirus (HMPV) N-RNAELECTRON MICROSCOPY4.77
468PDN|1|lSpiral of assembled human metapneumovirus (HMPV) N-RNAELECTRON MICROSCOPY4.77
478PDN|1|aSpiral of assembled human metapneumovirus (HMPV) N-RNAELECTRON MICROSCOPY4.77
488OP1|1|JSubsection of a helical nucleocapsid of the Respiratory Syncytial VirusELECTRON MICROSCOPY3.57
498OP1|1|ISubsection of a helical nucleocapsid of the Respiratory Syncytial VirusELECTRON MICROSCOPY3.57
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