Equivalence class NR_20.0_09297.2 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 7O5B|1|U (rep) | Transfer RNA | tRNA, mRNA | Bacillus subtilis subsp. subtilis str. 168 | Bacteria | RF00005 | Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP bound | Electron microscopy | 3.33 | 2022-02-02 |
| 2 | 7QV1|1|H | Transfer RNA | P-site tRNA, mRNA | Bacillus subtilis subsp. subtilis str. 168 | Bacteria | RF00005 | Bacillus subtilis collided disome (Leading 70S) | Electron microscopy | 3.5 | 2022-03-09 |
| 3 | 7QV2|1|H | Transfer RNA | A/P-site tRNA, mRNA | Bacillus subtilis subsp. subtilis str. 168 | Bacteria | RF00005 | Bacillus subtilis collided disome (Collided 70S) | Electron microscopy | 3.5 | 2022-03-09 |
| 4 | 7QV2|1|x | Transfer RNA | P/E-site tRNA, mRNA | Bacillus subtilis subsp. subtilis str. 168 | Bacteria | RF00005 | Bacillus subtilis collided disome (Collided 70S) | Electron microscopy | 3.5 | 2022-03-09 |
| 5 | 3J9W|1|AX | Transfer RNA | tRNA-Asp, mRNA | Bacillus subtilis | Bacteria | RF00005 | Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex | Electron microscopy | 3.9 | 2015-04-29 |
| 6 | 7QGU|1|z | Transfer RNA | P-site tRNA | Bacillus subtilis | Bacteria | RF00005 | Structure of the B. subtilis disome - stalled 70S ribosome | Electron microscopy | 4.75 | 2022-03-16 |
| 7 | 7QV3|1|H | Transfer RNA | P-site tRNA, mRNA | Bacillus subtilis subsp. subtilis str. 168 | Bacteria | RF00005 | Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S) | Electron microscopy | 5.14 | 2022-03-09 |
| 8 | 7QH4|1|1 | Transfer RNA | tRNA | Bacillus subtilis | Bacteria | RF00005 | Structure of the B. subtilis disome - collided 70S ribosome | Electron microscopy | 5.45 | 2022-03-16 |
| 9 | 7QH4|1|y | Transfer RNA | tRNA | Bacillus subtilis | Bacteria | RF00005 | Structure of the B. subtilis disome - collided 70S ribosome | Electron microscopy | 5.45 | 2022-03-16 |
Release history
| Release | 3.222 | 3.223 | 3.224 | 3.225 | 3.226 | 3.227 | 3.228 | 3.229 | 3.230 | 3.231 | 3.232 | 3.233 | 3.234 | 3.235 | 3.236 | 3.237 | 3.238 | 3.239 | 3.240 | 3.241 | 3.242 | 3.243 | 3.244 | 3.245 | 3.246 | 3.247 | 3.248 | 3.249 | 3.250 | 3.251 | 3.252 | 3.253 | 3.254 | 3.255 | 3.256 | 3.257 | 3.258 | 3.259 | 3.260 | 3.261 | 3.262 | 3.263 | 3.264 | 3.265 | 3.266 | 3.267 | 3.268 | 3.269 | 3.270 | 3.271 | 3.272 | 3.273 | 3.274 | 3.275 | 3.276 | 3.277 | 3.278 | 3.279 | 3.280 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2022-03-16 | 2022-03-23 | 2022-03-30 | 2022-04-06 | 2022-04-13 | 2022-04-20 | 2022-04-27 | 2022-05-04 | 2022-05-11 | 2022-05-18 | 2022-05-25 | 2022-06-01 | 2022-06-08 | 2022-06-15 | 2022-06-22 | 2022-06-29 | 2022-07-06 | 2022-07-13 | 2022-07-20 | 2022-07-27 | 2022-08-03 | 2022-08-10 | 2022-08-17 | 2022-08-24 | 2022-08-31 | 2022-09-07 | 2022-09-14 | 2022-09-21 | 2022-09-28 | 2022-10-05 | 2022-10-12 | 2022-10-19 | 2022-10-26 | 2022-11-02 | 2022-11-09 | 2022-11-16 | 2022-11-23 | 2022-11-30 | 2022-12-07 | 2022-12-14 | 2022-12-21 | 2022-12-28 | 2023-01-04 | 2023-01-11 | 2023-01-18 | 2023-01-25 | 2023-02-01 | 2023-02-08 | 2023-02-15 | 2023-02-22 | 2023-03-01 | 2023-03-08 | 2023-03-15 | 2023-03-22 | 2023-03-29 | 2023-04-05 | 2023-04-12 | 2023-04-19 | 2023-04-26 |
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 7QH4|1|y | Structure of the B. subtilis disome - collided 70S ribosome | ELECTRON MICROSCOPY | 5.45 | 77 |
| 2 | 7QH4|1|1 | Structure of the B. subtilis disome - collided 70S ribosome | ELECTRON MICROSCOPY | 5.45 | 77 |
| 3 | 3J9W|1|AX | Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex | ELECTRON MICROSCOPY | 3.9 | 77 |
| 4 | 7QGU|1|z | Structure of the B. subtilis disome - stalled 70S ribosome | ELECTRON MICROSCOPY | 4.75 | 77 |
| 5 | 7QV1|1|H | Bacillus subtilis collided disome (Leading 70S) | ELECTRON MICROSCOPY | 3.5 | 77 |
| 6 | 7QV3|1|H | Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S) | ELECTRON MICROSCOPY | 5.14 | 77 |
| 7 | 7O5B|1|U | Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP bound | ELECTRON MICROSCOPY | 3.33 | 77 |
| 8 | 7QV2|1|H | Bacillus subtilis collided disome (Collided 70S) | ELECTRON MICROSCOPY | 3.5 | 77 |
| 9 | 7QV2|1|x | Bacillus subtilis collided disome (Collided 70S) | ELECTRON MICROSCOPY | 3.5 | 76 |