NR_20.0_10255.33

Members (76)
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#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	Date
1	7O7Y\|1\|B7 (rep)	5S ribosomal RNA	5S rRNA	Oryctolagus cuniculus	Eukarya	RF00001	Rabbit 80S ribosome stalled close to the mutated SARS-CoV-2 slippery site by a pseudoknot (high resolution)	Electron microscopy	2.2	2021-06-02
2	7OYD\|1\|K	5S ribosomal RNA	5S rRNA	Oryctolagus cuniculus	Eukarya	RF00001	Cryo-EM structure of a rabbit 80S ribosome with zebrafish Dap1b	Electron microscopy	2.3	2022-07-20
3	7O7Z\|1\|B7	5S ribosomal RNA	5S	Oryctolagus cuniculus	Eukarya	RF00001	Rabbit 80S ribosome stalled close to the mutated SARS-CoV-2 slippery site by a pseudoknot (classified for pseudoknot)	Electron microscopy	2.4	2021-06-02
4	8B6C\|1\|7	5S ribosomal RNA	5S rRNA	Oryctolagus cuniculus	Eukarya	RF00001	Cryo-EM structure of ribosome-Sec61 in complex with cyclotriazadisulfonamide derivative CK147	Electron microscopy	2.79	2023-02-22
5	7UCK\|1\|7	5S ribosomal RNA	5S rRNA	Oryctolagus cuniculus	Eukarya	RF00001	80S translation initiation complex with ac4c(-1) mRNA and Harringtonine	Electron microscopy	2.8	2022-06-01
6	8BPO\|1\|B1	5S ribosomal RNA	5S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	Structure of rabbit 80S ribosome translating beta-tubulin in complex with tetratricopeptide protein 5 (TTC5) and S-phase Cyclin A Associated Protein residing in the ER (SCAPER)	Electron microscopy	2.8	2023-07-05
7	7OBR\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	RNC-SRP early complex	Electron microscopy	2.8	2021-07-21
8	7QWQ\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	Ternary complex of ribosome nascent chain with SRP and NAC	Electron microscopy	2.83	2022-03-16
9	7ZJW\|1\|L7	5S ribosomal RNA	5S rRNA	Oryctolagus cuniculus	Eukarya	RF00001	Rabbit 80S ribosome as it decodes the Sec-UGA codon	Electron microscopy	2.8	2022-10-19
10	8B5L\|1\|7	5S ribosomal RNA	5S rRNA	Oryctolagus cuniculus	Eukarya	RF00001	Cryo-EM structure of ribosome-Sec61-TRAP (TRanslocon Associated Protein) translocon complex	Electron microscopy	2.86	2023-03-01
11	6SGC\|1\|74	5S ribosomal RNA	5S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	Rabbit 80S ribosome stalled on a poly(A) tail	Electron microscopy	2.8	2019-12-04
12	7QWR\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC	Electron microscopy	2.9	2022-03-09
13	8P2K\|1\|B7	5S ribosomal RNA	5S rRNA	Oryctolagus cuniculus	Eukarya	RF00001	Ternary complex of translating ribosome, NAC and METAP1	Electron microscopy	2.9	2023-07-19
14	7O80\|1\|B7	5S ribosomal RNA	5S rRNA	Oryctolagus cuniculus	Eukarya	RF00001	Rabbit 80S ribosome in complex with eRF1 and ABCE1 stalled at the STOP codon in the mutated SARS-CoV-2 slippery site	Electron microscopy	2.9	2021-06-02
15	7TOR\|1\|A5S	5S ribosomal RNA	5S rRNA	Oryctolagus cuniculus	Eukarya	RF00001	Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20	Electron microscopy	2.9	2022-05-25
16	6R5Q\|1\|7	5S ribosomal RNA	5S rRNA	Oryctolagus cuniculus	Eukarya	RF00001	Structure of XBP1u-paused ribosome nascent chain complex (post-state)	Electron microscopy	3	2019-07-10
17	7UCJ\|1\|7	5S ribosomal RNA	5S rRNA	Oryctolagus cuniculus	Eukarya	RF00001	Mammalian 80S translation initiation complex with mRNA and Harringtonine	Electron microscopy	3.1	2022-06-01
18	6R6P\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	Structure of XBP1u-paused ribosome nascent chain complex (rotated state)	Electron microscopy	3.1	2019-07-10
19	7NWI\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	Mammalian pre-termination 80S ribosome with Empty-A site bound by Blasticidin S	Electron microscopy	3.13	2021-07-07
20	8BHF\|1\|B2	5S ribosomal RNA	5S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	Cryo-EM structure of stalled rabbit 80S ribosomes in complex with human CCR4-NOT and CNOT4	Electron microscopy	3.1	2023-09-06
21	7ZJX\|1\|L7	5S ribosomal RNA	5S rRNA	Oryctolagus cuniculus	Eukarya	RF00001	Rabbit 80S ribosome programmed with SECIS and SBP2	Electron microscopy	3.1	2022-09-07
22	6P5K\|1\|7	5S ribosomal RNA	5S rRNA	Oryctolagus cuniculus	Eukarya	RF00001	Structure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 3)	Electron microscopy	3.1	2019-09-18
23	7O81\|1\|B7	5S ribosomal RNA	5S rRNA	Oryctolagus cuniculus	Eukarya	RF00001	Rabbit 80S ribosome colliding in another ribosome stalled by the SARS-CoV-2 pseudoknot	Electron microscopy	3.1	2021-06-02
24	7TOQ\|1\|A5S	5S ribosomal RNA	5S rRNA	Oryctolagus cuniculus	Eukarya	RF00001	Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PR	Electron microscopy	3.1	2022-05-25
25	6P5J\|1\|7	5S ribosomal RNA	5S rRNA	Oryctolagus cuniculus	Eukarya	RF00001	Structure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 2)	Electron microscopy	3.1	2019-09-18
26	6P5I\|1\|7	5S ribosomal RNA	5S rRNA	Oryctolagus cuniculus	Eukarya	RF00001	Structure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 1)	Electron microscopy	3.1	2019-09-18
27	6T59\|1\|74	5S ribosomal RNA	5S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	Structure of rabbit 80S ribosome translating beta-tubulin in complex with tetratricopeptide protein 5 and nascent chain-associated complex	Electron microscopy	3.11	2019-11-27
28	7NFX\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	Mammalian ribosome nascent chain complex with SRP and SRP receptor in early state A	Electron microscopy	3.2	2021-06-02
29	6P5N\|1\|7	5S ribosomal RNA	5S rRNA	Oryctolagus cuniculus	Eukarya	RF00001	Structure of a mammalian 80S ribosome in complex with a single translocated Israeli Acute Paralysis Virus IRES and eRF1	Electron microscopy	3.2	2019-09-25
30	7MDZ\|1\|7	5S ribosomal RNA	5S rRNA	Oryctolagus cuniculus	Eukarya	RF00001	80S rabbit ribosome stalled with benzamide-CHX	Electron microscopy	3.2	2021-09-01
31	7TM3\|1\|u	5S ribosomal RNA	5S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	Structure of the rabbit 80S ribosome stalled on a 2-TMD Rhodopsin intermediate in complex with the multipass translocon	Electron microscopy	3.25	2022-10-19
32	6D9J\|1\|7	5S ribosomal RNA	5S rRNA	Oryctolagus cuniculus	Eukarya	RF00001	Mammalian 80S ribosome with a double translocated CrPV-IRES, P-sitetRNA and eRF1.	Electron microscopy	3.2	2018-06-06
33	5LZS\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	Structure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin B	Electron microscopy	3.31	2016-11-30
34	5LZV\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	Structure of the mammalian ribosomal termination complex with accommodated eRF1(AAQ) and ABCE1.	Electron microscopy	3.35	2016-11-30
35	6MTD\|1\|7	5S ribosomal RNA	5S rRNA	Oryctolagus cuniculus	Eukarya	RF00001	Rabbit 80S ribosome with eEF2 and SERBP1 (unrotated state with 40S head swivel)	Electron microscopy	3.3	2018-11-21
36	7QWS\|1\|7	5S ribosomal RNA	5S rRNA	Oryctolagus cuniculus	Eukarya	RF00001	Structure of ribosome translating beta-tubulin in complex with TTC5 and NAC	Electron microscopy	3.4	2022-03-09
37	6ZVK\|1\|d2	5S ribosomal RNA	5S RIBOSOMAL RNA	Oryctolagus cuniculus	Eukarya	RF00001	The Halastavi arva virus (HalV) intergenic region IRES promotes translation by the simplest possible initiation mechanism	Electron microscopy	3.49	2020-12-23
38	6MTE\|1\|7	5S ribosomal RNA	5S rRNA	Oryctolagus cuniculus	Eukarya	RF00001	Rabbit 80S ribosome with eEF2 and SERBP1 (rotated state)	Electron microscopy	3.4	2018-11-21
39	5LZZ\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	Structure of the mammalian rescue complex with Pelota and Hbs1l (combined)	Electron microscopy	3.47	2016-11-30
40	6MTC\|1\|7	5S ribosomal RNA	5S rRNA	Oryctolagus cuniculus	Eukarya	RF00001	Rabbit 80S ribosome with Z-site tRNA and IFRD2 (unrotated state)	Electron microscopy	3.4	2018-11-21
41	5LZW\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a truncated mRNA.	Electron microscopy	3.53	2016-11-30
42	8BTK\|1\|B7	5S ribosomal RNA	5S rRNA	Oryctolagus cuniculus	Eukarya	RF00001	Structure of the TRAP complex with the Sec translocon and a translating ribosome	Electron microscopy	3.5	2023-05-24
43	6D90\|1\|7	5S ribosomal RNA	5S rRNA	Oryctolagus cuniculus	Eukarya	RF00001	Mammalian 80S ribosome with a double translocated CrPV-IRES, P-site tRNA and eRF1.	Electron microscopy	3.2	2018-06-06
44	7A01\|1\|d2	5S ribosomal RNA	5S RIBOSOMAL RNA	Oryctolagus cuniculus	Eukarya	RF00001	The Halastavi arva virus intergenic region IRES promotes translation by the simplest possible initiation mechanism	Electron microscopy	3.6	2020-12-30
45	5LZT\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	Structure of the mammalian ribosomal termination complex with eRF1 and eRF3.	Electron microscopy	3.65	2016-11-30
46	5LZX\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a UGA stop codon.	Electron microscopy	3.67	2016-11-30
47	6GZ5\|1\|A4	5S ribosomal RNA	5S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-3 (TI-POST-3)	Electron microscopy	3.5	2018-12-05
48	6MTB\|1\|7	5S ribosomal RNA	5S rRNA	Oryctolagus cuniculus	Eukarya	RF00001	Rabbit 80S ribosome with P- and Z-site tRNAs (unrotated state)	Electron microscopy	3.6	2018-11-21
49	6GZ3\|1\|A4	5S ribosomal RNA	5S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-1 (TI-POST-1)	Electron microscopy	3.6	2018-12-05
50	6FRK\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	Structure of a prehandover mammalian ribosomal SRP and SRP receptor targeting complex	Electron microscopy	3.7	2018-03-28
51	5LZU\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	Structure of the mammalian ribosomal termination complex with accommodated eRF1	Electron microscopy	3.75	2016-11-30
52	6R6G\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	Structure of XBP1u-paused ribosome nascent chain complex with SRP.	Electron microscopy	3.7	2019-07-10
53	7NWG\|1\|71	5S ribosomal RNA	5S Ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.	Electron microscopy	3.8	2021-07-07
54	6GZ4\|1\|A4	5S ribosomal RNA	5S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-2 (TI-POST-2)	Electron microscopy	3.6	2018-12-05
55	6HCJ\|1\|71	5S ribosomal RNA	5S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	Structure of the rabbit 80S ribosome on globin mRNA in the rotated state with A/P and P/E tRNAs	Electron microscopy	3.8	2018-10-17
56	3JAH\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codon	Electron microscopy	3.45	2015-08-12
57	7TUT\|1\|u	5S ribosomal RNA	5S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	Structure of the rabbit 80S ribosome stalled on a 4-TMD Rhodopsin intermediate in complex with the multipass translocon	Electron microscopy	3.88	2022-10-19
58	6R7Q\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	Structure of XBP1u-paused ribosome nascent chain complex with Sec61.	Electron microscopy	3.9	2019-07-10
59	3J92\|1\|7	5S ribosomal RNA	5S rRNA	Oryctolagus cuniculus	Eukarya	RF00001	Structure and assembly pathway of the ribosome quality control complex	Electron microscopy	3.6	2015-01-21
60	5LZY\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a polyadenylated mRNA.	Electron microscopy	3.99	2016-11-30
61	3JAG\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon	Electron microscopy	3.65	2015-08-12
62	7NWH\|1\|7	5S ribosomal RNA	5S Ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	Mammalian pre-termination 80S ribosome with eRF1 and eRF3 bound by Blasticidin S.	Electron microscopy	4.1	2021-07-07
63	3JAI\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon	Electron microscopy	3.65	2015-08-12
64	6HCF\|1\|72	5S ribosomal RNA	5S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	Structure of the rabbit 80S ribosome stalled on globin mRNA at the stop codon	Electron microscopy	3.9	2018-10-17
65	6FTI\|1\|v	5S ribosomal RNA	5S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Programmed 80S Ribosome	Electron microscopy	4.2	2018-03-21
66	6FTJ\|1\|v	5S ribosomal RNA	5S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Non-programmed 80S Ribosome	Electron microscopy	4.7	2018-03-21
67	6HCQ\|1\|71	5S ribosomal RNA	5S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	Structure of the rabbit collided di-ribosome (collided monosome)	Electron microscopy	6.5	2018-10-17
68	6HCM\|1\|72	5S ribosomal RNA	5S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	Structure of the rabbit collided di-ribosome (stalled monosome)	Electron microscopy	6.8	2018-10-17
69	4UJE\|1\|A4	5S ribosomal RNA	5S Ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement	Electron microscopy	6.9	2014-07-16
70	3JAN\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	Structure of the scanning state of the mammalian SRP-ribosome complex	Electron microscopy	3.75	2015-08-05
71	3JAJ\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	Structure of the engaged state of the mammalian SRP-ribosome complex	Electron microscopy	3.75	2015-08-05
72	6FTG\|1\|v	5S ribosomal RNA	5S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes	Electron microscopy	9.1	2018-03-21
73	4UJD\|1\|A4	5S ribosomal RNA	5S Ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	mammalian 80S HCV-IRES initiation complex with eIF5B PRE-like state	Electron microscopy	8.9	2014-07-30
74	4D5Y\|1\|4	5S ribosomal RNA	5S Ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF00001	Cryo-EM structures of ribosomal 80S complexes with termination factors and cricket paralysis virus IRES reveal the IRES in the translocated state	Electron microscopy	9	2015-03-04
75	4D67\|1\|4	5S ribosomal RNA	5S RRNA	Oryctolagus cuniculus	Eukarya	RF00001	Cryo-EM structures of ribosomal 80S complexes with termination factors and cricket paralysis virus IRES reveal the IRES in the translocated state	Electron microscopy	9	2015-03-04
76	4UJC\|1\|A4	5S ribosomal RNA	5S RIBOSOMAL RNA	Oryctolagus cuniculus	Eukarya	RF00001	mammalian 80S HCV-IRES initiation complex with eIF5B POST-like state	Electron microscopy	9.5	2014-07-30

Release history

Release	3.299	3.300	3.301	3.302	3.303	3.304	3.305	3.306	3.307	3.308	3.309	3.310	3.311	3.312	3.313	3.314
Date	2023-09-06	2023-09-13	2023-09-20	2023-09-27	2023-10-04	2023-10-11	2023-10-18	2023-10-25	2023-11-01	2023-11-08	2023-11-15	2023-11-24	2023-11-29	2023-12-06	2023-12-13	2023-12-20

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent
NR_20.0_10255.33	NR_20.0_10255.32	3.299	(75) 5LZX\|1\|7, 7MDZ\|1\|7, 5LZW\|1\|7, 7A01\|1\|d2, 5LZV\|1\|7, 6ZVK\|1\|d2, 5LZU\|1\|7, 6T59\|1\|74, 5LZT\|1\|7, 6SGC\|1\|74, 5LZS\|1\|7, 6R7Q\|1\|7, 4UJE\|1\|A4, 6R6P\|1\|7, 8P2K\|1\|B7, 4UJD\|1\|A4, 6R6G\|1\|7, 8BTK\|1\|B7, 4UJC\|1\|A4, 6R5Q\|1\|7, 8BPO\|1\|B1, 4D67\|1\|4, 6P5N\|1\|7, 8B6C\|1\|7, 4D5Y\|1\|4, 6P5K\|1\|7, 8B5L\|1\|7, 3JAN\|1\|7, 6P5J\|1\|7, 7ZJX\|1\|L7, 3JAJ\|1\|7, 6P5I\|1\|7, 7ZJW\|1\|L7, 3JAI\|1\|7, 6MTE\|1\|7, 7UCK\|1\|7, 3JAH\|1\|7, 6MTD\|1\|7, 7UCJ\|1\|7, 3JAG\|1\|7, 6MTC\|1\|7, 7TUT\|1\|u, 3J92\|1\|7, 6MTB\|1\|7, 7TOR\|1\|A5S, 6HCQ\|1\|71, 7TOQ\|1\|A5S, 6HCM\|1\|72, 7TM3\|1\|u, 6HCJ\|1\|71, 7QWS\|1\|7, 6HCF\|1\|72, 7QWR\|1\|7, 6GZ5\|1\|A4, 7QWQ\|1\|7, 6GZ4\|1\|A4, 7OYD\|1\|K, 6GZ3\|1\|A4, 7OBR\|1\|7, 6FTJ\|1\|v, 7O81\|1\|B7, 6FTI\|1\|v, 7O80\|1\|B7, 6FTG\|1\|v, 7O7Z\|1\|B7, 6FRK\|1\|7, 7O7Y\|1\|B7, 6D9J\|1\|7, 7NWI\|1\|7, 6D90\|1\|7, 7NWH\|1\|7, 5LZZ\|1\|7, 7NWG\|1\|71, 5LZY\|1\|7, 7NFX\|1\|7	(1) 8BHF\|1\|B2	(0)

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).

#S	PDB	Title	Method	Resolution	Length
1	4D67\|1\|4	Cryo-EM structures of ribosomal 80S complexes with termination factors and cricket paralysis virus IRES reveal the IRES in the translocated state	ELECTRON MICROSCOPY	9	119
2	4D5Y\|1\|4	Cryo-EM structures of ribosomal 80S complexes with termination factors and cricket paralysis virus IRES reveal the IRES in the translocated state	ELECTRON MICROSCOPY	9	119
3	4UJD\|1\|A4	mammalian 80S HCV-IRES initiation complex with eIF5B PRE-like state	ELECTRON MICROSCOPY	8.9	119
4	4UJC\|1\|A4	mammalian 80S HCV-IRES initiation complex with eIF5B POST-like state	ELECTRON MICROSCOPY	9.5	119
5	4UJE\|1\|A4	Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement	ELECTRON MICROSCOPY	6.9	119
6	6ZVK\|1\|d2	The Halastavi arva virus (HalV) intergenic region IRES promotes translation by the simplest possible initiation mechanism	ELECTRON MICROSCOPY	3.49	120
7	7A01\|1\|d2	The Halastavi arva virus intergenic region IRES promotes translation by the simplest possible initiation mechanism	ELECTRON MICROSCOPY	3.6	120
8	6GZ4\|1\|A4	tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-2 (TI-POST-2)	ELECTRON MICROSCOPY	3.6	119
9	6GZ5\|1\|A4	tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-3 (TI-POST-3)	ELECTRON MICROSCOPY	3.5	119
10	6GZ3\|1\|A4	tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-1 (TI-POST-1)	ELECTRON MICROSCOPY	3.6	119
11	7QWS\|1\|7	Structure of ribosome translating beta-tubulin in complex with TTC5 and NAC	ELECTRON MICROSCOPY	3.4	120
12	7QWR\|1\|7	Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC	ELECTRON MICROSCOPY	2.9	120
13	7QWQ\|1\|7	Ternary complex of ribosome nascent chain with SRP and NAC	ELECTRON MICROSCOPY	2.83	120
14	7OBR\|1\|7	RNC-SRP early complex	ELECTRON MICROSCOPY	2.8	120
15	7NFX\|1\|7	Mammalian ribosome nascent chain complex with SRP and SRP receptor in early state A	ELECTRON MICROSCOPY	3.2	120
16	6R6P\|1\|7	Structure of XBP1u-paused ribosome nascent chain complex (rotated state)	ELECTRON MICROSCOPY	3.1	120
17	6R6G\|1\|7	Structure of XBP1u-paused ribosome nascent chain complex with SRP.	ELECTRON MICROSCOPY	3.7	120
18	6R5Q\|1\|7	Structure of XBP1u-paused ribosome nascent chain complex (post-state)	ELECTRON MICROSCOPY	3	120
19	7TOQ\|1\|A5S	Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PR	ELECTRON MICROSCOPY	3.1	120
20	7TOR\|1\|A5S	Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20	ELECTRON MICROSCOPY	2.9	120
21	8B6C\|1\|7	Cryo-EM structure of ribosome-Sec61 in complex with cyclotriazadisulfonamide derivative CK147	ELECTRON MICROSCOPY	2.79	120
22	8B5L\|1\|7	Cryo-EM structure of ribosome-Sec61-TRAP (TRanslocon Associated Protein) translocon complex	ELECTRON MICROSCOPY	2.86	120
23	8BPO\|1\|B1	Structure of rabbit 80S ribosome translating beta-tubulin in complex with tetratricopeptide protein 5 (TTC5) and S-phase Cyclin A Associated Protein residing in the ER (SCAPER)	ELECTRON MICROSCOPY	2.8	120
24	7TM3\|1\|u	Structure of the rabbit 80S ribosome stalled on a 2-TMD Rhodopsin intermediate in complex with the multipass translocon	ELECTRON MICROSCOPY	3.25	120
25	7TUT\|1\|u	Structure of the rabbit 80S ribosome stalled on a 4-TMD Rhodopsin intermediate in complex with the multipass translocon	ELECTRON MICROSCOPY	3.88	120
26	6MTE\|1\|7	Rabbit 80S ribosome with eEF2 and SERBP1 (rotated state)	ELECTRON MICROSCOPY	3.4	120
27	6MTD\|1\|7	Rabbit 80S ribosome with eEF2 and SERBP1 (unrotated state with 40S head swivel)	ELECTRON MICROSCOPY	3.3	120
28	6MTB\|1\|7	Rabbit 80S ribosome with P- and Z-site tRNAs (unrotated state)	ELECTRON MICROSCOPY	3.6	120
29	6MTC\|1\|7	Rabbit 80S ribosome with Z-site tRNA and IFRD2 (unrotated state)	ELECTRON MICROSCOPY	3.4	120
30	7MDZ\|1\|7	80S rabbit ribosome stalled with benzamide-CHX	ELECTRON MICROSCOPY	3.2	119
31	8BHF\|1\|B2	Cryo-EM structure of stalled rabbit 80S ribosomes in complex with human CCR4-NOT and CNOT4	ELECTRON MICROSCOPY	3.1	119
32	6R7Q\|1\|7	Structure of XBP1u-paused ribosome nascent chain complex with Sec61.	ELECTRON MICROSCOPY	3.9	120
33	5LZS\|1\|7	Structure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin B	ELECTRON MICROSCOPY	3.31	119
34	5LZU\|1\|7	Structure of the mammalian ribosomal termination complex with accommodated eRF1	ELECTRON MICROSCOPY	3.75	120
35	5LZV\|1\|7	Structure of the mammalian ribosomal termination complex with accommodated eRF1(AAQ) and ABCE1.	ELECTRON MICROSCOPY	3.35	120
36	5LZT\|1\|7	Structure of the mammalian ribosomal termination complex with eRF1 and eRF3.	ELECTRON MICROSCOPY	3.65	120
37	5LZW\|1\|7	Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a truncated mRNA.	ELECTRON MICROSCOPY	3.53	120
38	5LZX\|1\|7	Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a UGA stop codon.	ELECTRON MICROSCOPY	3.67	120
39	5LZZ\|1\|7	Structure of the mammalian rescue complex with Pelota and Hbs1l (combined)	ELECTRON MICROSCOPY	3.47	120
40	5LZY\|1\|7	Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a polyadenylated mRNA.	ELECTRON MICROSCOPY	3.99	120
41	3JAI\|1\|7	Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon	ELECTRON MICROSCOPY	3.65	120
42	3JAH\|1\|7	Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codon	ELECTRON MICROSCOPY	3.45	120
43	6FTG\|1\|v	Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes	ELECTRON MICROSCOPY	9.1	120
44	6FTI\|1\|v	Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Programmed 80S Ribosome	ELECTRON MICROSCOPY	4.2	120
45	6FTJ\|1\|v	Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Non-programmed 80S Ribosome	ELECTRON MICROSCOPY	4.7	120
46	3JAG\|1\|7	Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon	ELECTRON MICROSCOPY	3.65	120
47	3J92\|1\|7	Structure and assembly pathway of the ribosome quality control complex	ELECTRON MICROSCOPY	3.6	120
48	3JAN\|1\|7	Structure of the scanning state of the mammalian SRP-ribosome complex	ELECTRON MICROSCOPY	3.75	120
49	3JAJ\|1\|7	Structure of the engaged state of the mammalian SRP-ribosome complex	ELECTRON MICROSCOPY	3.75	120
50	6FRK\|1\|7	Structure of a prehandover mammalian ribosomal SRP and SRP receptor targeting complex	ELECTRON MICROSCOPY	3.7	120
51	6T59\|1\|74	Structure of rabbit 80S ribosome translating beta-tubulin in complex with tetratricopeptide protein 5 and nascent chain-associated complex	ELECTRON MICROSCOPY	3.11	120
52	6P5J\|1\|7	Structure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 2)	ELECTRON MICROSCOPY	3.1	119
53	6P5K\|1\|7	Structure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 3)	ELECTRON MICROSCOPY	3.1	119
54	6P5I\|1\|7	Structure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 1)	ELECTRON MICROSCOPY	3.1	119
55	7ZJX\|1\|L7	Rabbit 80S ribosome programmed with SECIS and SBP2	ELECTRON MICROSCOPY	3.1	119
56	7O81\|1\|B7	Rabbit 80S ribosome colliding in another ribosome stalled by the SARS-CoV-2 pseudoknot	ELECTRON MICROSCOPY	3.1	119
57	7O80\|1\|B7	Rabbit 80S ribosome in complex with eRF1 and ABCE1 stalled at the STOP codon in the mutated SARS-CoV-2 slippery site	ELECTRON MICROSCOPY	2.9	119
58	8BTK\|1\|B7	Structure of the TRAP complex with the Sec translocon and a translating ribosome	ELECTRON MICROSCOPY	3.5	119
59	8P2K\|1\|B7	Ternary complex of translating ribosome, NAC and METAP1	ELECTRON MICROSCOPY	2.9	119
60	7O7Y\|1\|B7	Rabbit 80S ribosome stalled close to the mutated SARS-CoV-2 slippery site by a pseudoknot (high resolution)	ELECTRON MICROSCOPY	2.2	119
61	7O7Z\|1\|B7	Rabbit 80S ribosome stalled close to the mutated SARS-CoV-2 slippery site by a pseudoknot (classified for pseudoknot)	ELECTRON MICROSCOPY	2.4	119
62	6SGC\|1\|74	Rabbit 80S ribosome stalled on a poly(A) tail	ELECTRON MICROSCOPY	2.8	119
63	7ZJW\|1\|L7	Rabbit 80S ribosome as it decodes the Sec-UGA codon	ELECTRON MICROSCOPY	2.8	119
64	7OYD\|1\|K	Cryo-EM structure of a rabbit 80S ribosome with zebrafish Dap1b	ELECTRON MICROSCOPY	2.3	119
65	6P5N\|1\|7	Structure of a mammalian 80S ribosome in complex with a single translocated Israeli Acute Paralysis Virus IRES and eRF1	ELECTRON MICROSCOPY	3.2	119
66	7UCK\|1\|7	80S translation initiation complex with ac4c(-1) mRNA and Harringtonine	ELECTRON MICROSCOPY	2.8	120
67	7UCJ\|1\|7	Mammalian 80S translation initiation complex with mRNA and Harringtonine	ELECTRON MICROSCOPY	3.1	120
68	7NWI\|1\|7	Mammalian pre-termination 80S ribosome with Empty-A site bound by Blasticidin S	ELECTRON MICROSCOPY	3.13	120
69	6D90\|1\|7	Mammalian 80S ribosome with a double translocated CrPV-IRES, P-site tRNA and eRF1.	ELECTRON MICROSCOPY	3.2	119
70	7NWH\|1\|7	Mammalian pre-termination 80S ribosome with eRF1 and eRF3 bound by Blasticidin S.	ELECTRON MICROSCOPY	4.1	120
71	6D9J\|1\|7	Mammalian 80S ribosome with a double translocated CrPV-IRES, P-sitetRNA and eRF1.	ELECTRON MICROSCOPY	3.2	119
72	6HCF\|1\|72	Structure of the rabbit 80S ribosome stalled on globin mRNA at the stop codon	ELECTRON MICROSCOPY	3.9	120
73	6HCM\|1\|72	Structure of the rabbit collided di-ribosome (stalled monosome)	ELECTRON MICROSCOPY	6.8	120
74	7NWG\|1\|71	Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.	ELECTRON MICROSCOPY	3.8	120
75	6HCQ\|1\|71	Structure of the rabbit collided di-ribosome (collided monosome)	ELECTRON MICROSCOPY	6.5	120
76	6HCJ\|1\|71	Structure of the rabbit 80S ribosome on globin mRNA in the rotated state with A/P and P/E tRNAs	ELECTRON MICROSCOPY	3.8	120

Equivalence class NR_20.0_10255.33 Obsolete

Release history

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