#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
17SYQ|1|z (rep)Internal ribosome entry siteHCV IRESHepatitis C virus (isolate 1)VirusesRF00061Structure of the wt IRES and 40S ribosome ternary complex, open conformation. Structure 11(wt)Electron microscopy3.82022-07-27
25FLX|1|zInternal ribosome entry siteHCV-IRESHepacivirus CVirusesRF00061Mammalian 40S HCV-IRES complexElectron microscopy3.92015-12-23
37SYV|1|zInternal ribosome entry siteHCV IREShepatitis C virus genotype 1aVirusesRF00061Structure of the wt IRES eIF5B-containing pre-48S initiation complex, open conformation. Structure 14(wt)Electron microscopy3.92022-07-20
47SYS|1|zInternal ribosome entry siteHCV IRESHepatitis C virus (isolate 1)VirusesRF00061Structure of the delta dII IRES eIF2-containing 48S initiation complex, closed conformation. Structure 12(delta dII).Electron microscopy3.52022-07-27
57SYP|1|zInternal ribosome entry siteHCV IRESHepatitis C virus (isolate 1)VirusesRF00061Structure of the wt IRES and 40S ribosome binary complex, open conformation. Structure 10(wt)Electron microscopy42022-07-27
67SYR|1|zInternal ribosome entry siteHCV IRESHepatitis C virus (isolate 1)VirusesRF00061Structure of the wt IRES eIF2-containing 48S initiation complex, closed conformation. Structure 12(wt).Electron microscopy3.62022-07-27
75A2Q|1|3Internal ribosome entry siteHCV IRESHepacivirus CVirusesRF00061Structure of the HCV IRES bound to the human ribosomeElectron microscopy3.92015-07-15
87SYW|1|zInternal ribosome entry siteHCV IRESHepatitis C virus (isolate 1)VirusesRF00061Structure of the wt IRES eIF5B-containing 48S initiation complex, closed conformation. Structure 15(wt)Electron microscopy3.72022-07-13
97SYX|1|zInternal ribosome entry siteHCV IRESHepatitis C virus (isolate 1)VirusesRF00061Structure of the delta dII IRES eIF5B-containing 48S initiation complex, closed conformation. Structure 15(delta dII)Electron microscopy3.72022-07-13
107SYN|1|zInternal ribosome entry siteHCV IRESHepatitis C virus (isolate 1)VirusesRF00061Structure of the HCV IRES bound to the 40S ribosomal subunit, head opening. Structure 8(delta dII)Electron microscopy42022-07-13
117SYT|1|zInternal ribosome entry siteHCV IRESHepatitis C virus (isolate 1)VirusesRF00061Structure of the wt IRES w/o eIF2 48S initiation complex, closed conformation. Structure 13(wt)Electron microscopy4.42022-07-13
127SYK|1|zInternal ribosome entry siteHCV IREShepatitis C virus genotype 1aVirusesRF00061Structure of the HCV IRES binding to the 40S ribosomal subunit, closed conformation. Structure 5(delta dII)Electron microscopy4.22022-07-13
135OA3|1|3Internal ribosome entry siteIRES mRNAHepacivirus CVirusesRF00061Human 40S-eIF2D-re-initiation complexElectron microscopy4.22017-08-09
147SYG|1|zInternal ribosome entry siteHCV IRESHepatitis C virus (isolate 1)VirusesRF00061Structure of the HCV IRES binding to the 40S ribosomal subunit, closed conformation. Structure 1(delta dII)Electron microscopy4.32022-07-13
157SYU|1|zInternal ribosome entry siteHCV IRESHepatitis C virus (isolate 1)VirusesRF00061Structure of the delta dII IRES w/o eIF2 48S initiation complex, closed conformation. Structure 13(delta dII)Electron microscopy4.62022-07-13
167SYI|1|zInternal ribosome entry siteHCV IRESHepacivirus CVirusesRF00061Structure of the HCV IRES binding to the 40S ribosomal subunit, closed conformation. Structure 3(delta dII)Electron microscopy4.52022-07-13
177SYL|1|zInternal ribosome entry siteHCV IREShepatitis C virus genotype 1aVirusesRF00061Structure of the HCV IRES bound to the 40S ribosomal subunit, closed conformation. Structure 6(delta dII)Electron microscopy4.52022-07-13
187SYO|1|zInternal ribosome entry siteHCV IRESHepatitis C virus (isolate 1)VirusesRF00061Structure of the HCV IRES bound to the 40S ribosomal subunit, head open. Structure 9(delta dII)Electron microscopy4.62022-07-27
197SYH|1|zInternal ribosome entry siteHCV IRESHepatitis C virus (isolate 1)VirusesRF00061Structure of the HCV IRES binding to the 40S ribosomal subunit, closed conformation. Structure 2(delta dII)Electron microscopy4.62022-07-13
207SYM|1|zInternal ribosome entry siteHCV IRESHepatitis C virus (isolate 1)VirusesRF00061Structure of the HCV IRES bound to the 40S ribosomal subunit, head opening. Structure 7(delta dII)Electron microscopy4.82022-07-13
217SYJ|1|zInternal ribosome entry siteHCV IREShepatitis C virus genotype 1aVirusesRF00061Structure of the HCV IRES binding to the 40S ribosomal subunit, closed conformation. Structure 4(delta dII)Electron microscopy4.82022-07-13
224UJD|1|BCInternal ribosome entry siteHCV-IRESHepacivirus CVirusesRF00061mammalian 80S HCV-IRES initiation complex with eIF5B PRE-like stateElectron microscopy8.92014-07-30
234UJC|1|ACInternal ribosome entry siteHCV-IRESHepacivirus CVirusesRF00061mammalian 80S HCV-IRES initiation complex with eIF5B POST-like stateElectron microscopy9.52014-07-30

Release history

Release3.2413.2423.2433.2443.2453.2463.2473.2483.2493.2503.2513.2523.2533.2543.2553.2563.2573.2583.2593.2603.2613.2623.2633.2643.2653.2663.2673.2683.2693.2703.2713.2723.2733.2743.2753.2763.2773.2783.2793.2803.2813.2823.2833.2843.2853.2863.2873.2883.2893.2903.2913.2923.2933.2943.2953.2963.2973.2983.2993.3003.3013.3023.3033.3043.3053.3063.3073.3083.3093.3103.3113.3123.3133.3143.3153.3163.3173.3183.3193.3203.3213.3223.3233.3243.3253.3263.3273.3283.3293.3303.3313.332
Date2022-07-272022-08-032022-08-102022-08-172022-08-242022-08-312022-09-072022-09-142022-09-212022-09-282022-10-052022-10-122022-10-192022-10-262022-11-022022-11-092022-11-162022-11-232022-11-302022-12-072022-12-142022-12-212022-12-282023-01-042023-01-112023-01-182023-01-252023-02-012023-02-082023-02-152023-02-222023-03-012023-03-082023-03-152023-03-222023-03-292023-04-052023-04-122023-04-192023-04-262023-05-032023-05-102023-05-172023-05-242023-05-312023-06-072023-06-142023-06-212023-06-282023-07-052023-07-122023-07-192023-07-262023-08-022023-08-092023-08-162023-08-232023-08-302023-09-062023-09-132023-09-202023-09-272023-10-042023-10-112023-10-182023-10-252023-11-012023-11-082023-11-152023-11-242023-11-292023-12-062023-12-132023-12-202023-12-272024-01-032024-01-102024-01-172024-01-242024-01-312024-02-072024-02-142024-02-212024-02-282024-03-062024-03-132024-03-202024-03-272024-04-032024-04-102024-04-172024-04-24

Children

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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
15FLX|1|zMammalian 40S HCV-IRES complexELECTRON MICROSCOPY3.9264
25A2Q|1|3Structure of the HCV IRES bound to the human ribosomeELECTRON MICROSCOPY3.9257
37SYQ|1|zStructure of the wt IRES and 40S ribosome ternary complex, open conformation. Structure 11(wt)ELECTRON MICROSCOPY3.8264
47SYP|1|zStructure of the wt IRES and 40S ribosome binary complex, open conformation. Structure 10(wt)ELECTRON MICROSCOPY4249
57SYV|1|zStructure of the wt IRES eIF5B-containing pre-48S initiation complex, open conformation. Structure 14(wt)ELECTRON MICROSCOPY3.9258
67SYK|1|zStructure of the HCV IRES binding to the 40S ribosomal subunit, closed conformation. Structure 5(delta dII)ELECTRON MICROSCOPY4.2162
77SYR|1|zStructure of the wt IRES eIF2-containing 48S initiation complex, closed conformation. Structure 12(wt).ELECTRON MICROSCOPY3.6188
87SYS|1|zStructure of the delta dII IRES eIF2-containing 48S initiation complex, closed conformation. Structure 12(delta dII).ELECTRON MICROSCOPY3.5188
97SYU|1|zStructure of the delta dII IRES w/o eIF2 48S initiation complex, closed conformation. Structure 13(delta dII)ELECTRON MICROSCOPY4.6188
107SYT|1|zStructure of the wt IRES w/o eIF2 48S initiation complex, closed conformation. Structure 13(wt)ELECTRON MICROSCOPY4.4188
117SYW|1|zStructure of the wt IRES eIF5B-containing 48S initiation complex, closed conformation. Structure 15(wt)ELECTRON MICROSCOPY3.7188
127SYX|1|zStructure of the delta dII IRES eIF5B-containing 48S initiation complex, closed conformation. Structure 15(delta dII)ELECTRON MICROSCOPY3.7188
137SYM|1|zStructure of the HCV IRES bound to the 40S ribosomal subunit, head opening. Structure 7(delta dII)ELECTRON MICROSCOPY4.8162
147SYL|1|zStructure of the HCV IRES bound to the 40S ribosomal subunit, closed conformation. Structure 6(delta dII)ELECTRON MICROSCOPY4.5162
157SYO|1|zStructure of the HCV IRES bound to the 40S ribosomal subunit, head open. Structure 9(delta dII)ELECTRON MICROSCOPY4.6166
167SYN|1|zStructure of the HCV IRES bound to the 40S ribosomal subunit, head opening. Structure 8(delta dII)ELECTRON MICROSCOPY4162
175OA3|1|3Human 40S-eIF2D-re-initiation complexELECTRON MICROSCOPY4.2186
187SYJ|1|zStructure of the HCV IRES binding to the 40S ribosomal subunit, closed conformation. Structure 4(delta dII)ELECTRON MICROSCOPY4.8162
197SYI|1|zStructure of the HCV IRES binding to the 40S ribosomal subunit, closed conformation. Structure 3(delta dII)ELECTRON MICROSCOPY4.5162
207SYH|1|zStructure of the HCV IRES binding to the 40S ribosomal subunit, closed conformation. Structure 2(delta dII)ELECTRON MICROSCOPY4.6162
217SYG|1|zStructure of the HCV IRES binding to the 40S ribosomal subunit, closed conformation. Structure 1(delta dII)ELECTRON MICROSCOPY4.3162
224UJC|1|ACmammalian 80S HCV-IRES initiation complex with eIF5B POST-like stateELECTRON MICROSCOPY9.5261
234UJD|1|BCmammalian 80S HCV-IRES initiation complex with eIF5B PRE-like stateELECTRON MICROSCOPY8.9261
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