Equivalence class NR_20.0_17351.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6Y2L|1|B4 (rep) | Transfer RNA | tRNA, mRNA | Homo sapiens | Eukarya | RF00005 | Structure of human ribosome in POST state | Electron microscopy | 3 | 2020-04-15 |
| 2 | 6OLE|1|u | Transfer RNA | AP RNA, mRNA | Homo sapiens | Eukarya | RF00005 | Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAs | Electron microscopy | 3.1 | 2019-06-19 |
| 3 | 6OM0|1|u | Transfer RNA | tRNA, mRNA | Homo sapiens | Eukarya | RF00005 | Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAs | Electron microscopy | 3.1 | 2019-06-19 |
| 4 | 6Y0G|1|D4 | Transfer RNA | tRNA, mRNA | Homo sapiens | Eukarya | RF00005 | Structure of human ribosome in classical-PRE state | Electron microscopy | 3.2 | 2020-04-15 |
| 5 | 6Y0G|1|B4 | Transfer RNA | tRNA, mRNA | Homo sapiens | Eukarya | RF00005 | Structure of human ribosome in classical-PRE state | Electron microscopy | 3.2 | 2020-04-15 |
| 6 | 6OLG|1|Bv | Transfer RNA | tRNA, mRNA | Homo sapiens | Eukarya | RF00005 | Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA) | Electron microscopy | 3.4 | 2019-06-19 |
| 7 | 6OLI|1|u | Transfer RNA | tRNA, mRNA | Homo sapiens | Eukarya | RF00005 | Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC) | Electron microscopy | 3.5 | 2019-06-19 |
| 8 | 6Y57|1|D4 | Transfer RNA | A/P tRNA | Homo sapiens | Eukarya | RF00005 | Structure of human ribosome in hybrid-PRE state | Electron microscopy | 3.5 | 2020-04-15 |
| 9 | 6OM7|1|u | Transfer RNA | P/E site tRNA, mRNA | Homo sapiens | Eukarya | RF00005 | Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs | Electron microscopy | 3.7 | 2019-06-19 |
| 10 | 6OLZ|1|Bv | Transfer RNA | tRNA, mRNA | Homo sapiens | Eukarya | RF00005 | Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA | Electron microscopy | 3.9 | 2019-06-19 |
| 11 | 6OLF|1|u | Transfer RNA | PE tRNA, mRNA | Homo sapiens | Eukarya | RF00005 | Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs | Electron microscopy | 3.9 | 2019-06-19 |
Release history
| Release | 3.122 | 3.123 | 3.124 | 3.125 | 3.126 | 3.127 | 3.128 | 3.129 | 3.130 | 3.131 | 3.132 | 3.133 | 3.134 | 3.135 | 3.136 | 3.137 | 3.138 | 3.139 | 3.140 | 3.141 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2020-04-15 | 2020-04-22 | 2020-04-29 | 2020-05-06 | 2020-05-13 | 2020-05-20 | 2020-05-27 | 2020-06-03 | 2020-06-10 | 2020-06-17 | 2020-06-24 | 2020-07-01 | 2020-07-08 | 2020-07-15 | 2020-07-22 | 2020-07-29 | 2020-08-05 | 2020-08-12 | 2020-08-19 | 2020-08-26 |
Parents
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 6Y57|1|D4 | Structure of human ribosome in hybrid-PRE state | ELECTRON MICROSCOPY | 3.5 | 73 |
| 2 | 6OLI|1|u | Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC) | ELECTRON MICROSCOPY | 3.5 | 76 |
| 3 | 6OLE|1|u | Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAs | ELECTRON MICROSCOPY | 3.1 | 76 |
| 4 | 6OM0|1|u | Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAs | ELECTRON MICROSCOPY | 3.1 | 76 |
| 5 | 6OLZ|1|Bv | Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA | ELECTRON MICROSCOPY | 3.9 | 76 |
| 6 | 6OLG|1|Bv | Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA) | ELECTRON MICROSCOPY | 3.4 | 76 |
| 7 | 6Y2L|1|B4 | Structure of human ribosome in POST state | ELECTRON MICROSCOPY | 3 | 76 |
| 8 | 6Y0G|1|B4 | Structure of human ribosome in classical-PRE state | ELECTRON MICROSCOPY | 3.2 | 76 |
| 9 | 6Y0G|1|D4 | Structure of human ribosome in classical-PRE state | ELECTRON MICROSCOPY | 3.2 | 76 |
| 10 | 6OLF|1|u | Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs | ELECTRON MICROSCOPY | 3.9 | 76 |
| 11 | 6OM7|1|u | Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs | ELECTRON MICROSCOPY | 3.7 | 76 |