Equivalence class NR_20.0_17578.2 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 8C6J|1|2+ 8C6J|1|6 (rep) | U2 splicesomal small nuclear RNA + U6 spliceosomal RNA | U2 snRNA, U6 snRNA, PM5 Intron | Homo sapiens | Eukarya | RF00004 + RF00026 | Human spliceosomal PM5 C* complex | Electron microscopy | 2.8 | 2023-07-12 |
| 2 | 6QDV|1|2+ 6QDV|1|6 | U2 splicesomal small nuclear RNA + U6 spliceosomal RNA | U2 snRNA, U6 snRNA, Intron lariat: MINX RNA | Homo sapiens | Eukarya | RF00004 + RF00026 | Human post-catalytic P complex spliceosome | Electron microscopy | 3.3 | 2019-02-20 |
| 3 | 7W5A|1|H+ 7W5A|1|F | U2 splicesomal small nuclear RNA + U6 spliceosomal RNA | U2 snRNA, U6 snRNA, Pre-mRNA | Homo sapiens | Eukarya | RF00004 + RF00026 | The cryo-EM structure of human pre-C*-II complex | Electron microscopy | 3.6 | 2022-06-22 |
| 4 | 7W59|1|H+ 7W59|1|F | U2 splicesomal small nuclear RNA + U6 spliceosomal RNA | U2 snRNA, U6 snRNA, pre-mRNA | Homo sapiens | Eukarya | RF00004 + RF00026 | The cryo-EM structure of human pre-C*-I complex | Electron microscopy | 3.6 | 2022-06-22 |
| 5 | 6ICZ|1|H+ 6ICZ|1|F | U2 splicesomal small nuclear RNA + U6 spliceosomal RNA | U2snRNA, U6snRNA, pre-mRNA | Homo sapiens | Eukarya | RF00004 + RF00026 | Cryo-EM structure of a human post-catalytic spliceosome (P complex) at 3.0 angstrom | Electron microscopy | 3 | 2019-03-13 |
| 6 | 7W5B|1|H+ 7W5B|1|F | U2 splicesomal small nuclear RNA + U6 spliceosomal RNA | U2 snRNA, U6 snRNA, Pre-mRNA | Homo sapiens | Eukarya | RF00004 + RF00026 | The cryo-EM structure of human C* complex | Electron microscopy | 4.3 | 2022-06-22 |
| 7 | 5XJC|1|H+ 5XJC|1|F | U2 splicesomal small nuclear RNA + U6 spliceosomal RNA | Homo sapiens small nuclear RNA (U2) gene, U6 snRNA, pre-mRNA | Homo sapiens | Eukarya | RF00004 + RF00026 | Cryo-EM structure of the human spliceosome just prior to exon ligation at 3.6 angstrom | Electron microscopy | 3.6 | 2017-07-05 |
Release history
| Release | 3.291 | 3.292 | 3.293 | 3.294 | 3.295 | 3.296 | 3.297 | 3.298 | 3.299 | 3.300 | 3.301 | 3.302 | 3.303 | 3.304 | 3.305 | 3.306 | 3.307 | 3.308 | 3.309 | 3.310 | 3.311 | 3.312 | 3.313 | 3.314 | 3.315 | 3.316 | 3.317 | 3.318 | 3.319 | 3.320 | 3.321 | 3.322 | 3.323 | 3.324 | 3.325 | 3.326 | 3.327 | 3.328 | 3.329 | 3.330 | 3.331 | 3.332 | 3.333 | 3.334 | 3.335 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2023-07-12 | 2023-07-19 | 2023-07-26 | 2023-08-02 | 2023-08-09 | 2023-08-16 | 2023-08-23 | 2023-08-30 | 2023-09-06 | 2023-09-13 | 2023-09-20 | 2023-09-27 | 2023-10-04 | 2023-10-11 | 2023-10-18 | 2023-10-25 | 2023-11-01 | 2023-11-08 | 2023-11-15 | 2023-11-24 | 2023-11-29 | 2023-12-06 | 2023-12-13 | 2023-12-20 | 2023-12-27 | 2024-01-03 | 2024-01-10 | 2024-01-17 | 2024-01-24 | 2024-01-31 | 2024-02-07 | 2024-02-14 | 2024-02-21 | 2024-02-28 | 2024-03-06 | 2024-03-13 | 2024-03-20 | 2024-03-27 | 2024-04-03 | 2024-04-10 | 2024-04-17 | 2024-04-24 | 2024-05-01 | 2024-05-08 | 2024-05-15 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_20.0_17578.2 | NR_20.0_17578.1 | 3.291 | (6) 5XJC|1|H+5XJC|1|F, 7W5B|1|H+7W5B|1|F, 7W5A|1|H+7W5A|1|F, 7W59|1|H+7W59|1|F, 6QDV|1|2+6QDV|1|6, 6ICZ|1|H+6ICZ|1|F | (1) 8C6J|1|2+8C6J|1|6 | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 7W5A|1|H+7W5A|1|F | The cryo-EM structure of human pre-C*-II complex | ELECTRON MICROSCOPY | 3.6 | 140 |
| 2 | 7W5B|1|H+7W5B|1|F | The cryo-EM structure of human C* complex | ELECTRON MICROSCOPY | 4.3 | 140 |
| 3 | 7W59|1|H+7W59|1|F | The cryo-EM structure of human pre-C*-I complex | ELECTRON MICROSCOPY | 3.6 | 140 |
| 4 | 5XJC|1|H+5XJC|1|F | Cryo-EM structure of the human spliceosome just prior to exon ligation at 3.6 angstrom | ELECTRON MICROSCOPY | 3.6 | 140 |
| 5 | 6ICZ|1|H+6ICZ|1|F | Cryo-EM structure of a human post-catalytic spliceosome (P complex) at 3.0 angstrom | ELECTRON MICROSCOPY | 3 | 140 |
| 6 | 6QDV|1|2+6QDV|1|6 | Human post-catalytic P complex spliceosome | ELECTRON MICROSCOPY | 3.3 | 120 |
| 7 | 8C6J|1|2+8C6J|1|6 | Human spliceosomal PM5 C* complex | ELECTRON MICROSCOPY | 2.8 | 142 |